Guide to the Human Genome
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Name: CD36 Sequence: fasta or formatted (472aa) NCBI GI: 188536063
Description:

CD36 antigen

Referenced in:

Collagen
Additional Membrane Functions
Platelets and Megakaryocytes

Other entries for this name:
alt mRNA [472aa] CD36 antigen
alt mRNA [472aa] CD36 antigen
alt mRNA [472aa] CD36 antigen
alt mRNA [472aa] CD36 antigen
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         25           3
 C cysteine            2.1         10           1
 D aspartate           4.2         20           1
 E glutamate           5.1         24           3
 F phenylalanine       5.7         27           2
 G glycine             5.9         28           2
 H histidine           0.8          4           1
 I isoleucine          7.4         35           2
 K lysine              6.4         30           2
 L leucine             8.7         41           2
 M methionine          2.3         11           2
 N asparagine          6.6         31           2
 P proline             4.9         23           2
 Q glutamine           4.0         19           1
 R arginine            3.6         17           1
 S serine              7.0         33           2
 T threonine           5.3         25           3
 V valine              9.3         44           2
 W tryptophan          1.1          5           1
 Y tyrosine            4.2         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD36 antigen 
CD36                  1.000   CD36 antigen 
CD36                  1.000   CD36 antigen 
CD36                  1.000   CD36 antigen 
CD36                  1.000   CD36 antigen 
SCARB1                0.269   scavenger receptor class B, member 1 isoform 2 [Hom...
SCARB1                0.269   scavenger receptor class B, member 1 isoform 1 [Hom...
SCARB2                0.265   scavenger receptor class B, member 2 
ASH1L                 0.010   absent, small, or homeotic 1-like 
RBM23                 0.006   RNA binding motif protein 23 isoform 1 
RBM23                 0.006   RNA binding motif protein 23 isoform 2 
NUDT6                 0.005   nudix-type motif 6 isoform b 
NUDT6                 0.005   nudix-type motif 6 isoform a 
TJAP1                 0.005   tight junction associated protein 1 isoform b [Homo...
TJAP1                 0.005   tight junction associated protein 1 isoform b [Homo...
TJAP1                 0.005   tight junction associated protein 1 isoform b [Homo...
TJAP1                 0.005   tight junction associated protein 1 isoform b [Homo...
TJAP1                 0.005   tight junction associated protein 1 isoform a [Homo...
TJAP1                 0.005   tight junction associated protein 1 isoform a [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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