Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 131888281
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|131888281 hypothetical protein LOC55216 isoform b [Homo
sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|131888281 hypothetical protein LOC55216 isoform b [Homo sapiens] 589 e-169
gi|131889432 hypothetical protein LOC55216 isoform a [Homo sapiens] 585 e-167
gi|131889391 hypothetical protein LOC55216 isoform a [Homo sapiens] 585 e-167
gi|168229156 NFKB activating protein [Homo sapiens] 74 2e-13
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 67 2e-11
gi|56090620 NFKB activating protein-like [Homo sapiens] 66 3e-11
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 63 3e-10
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 59 5e-09
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 59 5e-09
gi|4557509 cylicin 2 [Homo sapiens] 58 9e-09
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 56 3e-08
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 55 1e-07
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 55 1e-07
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 54 1e-07
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 54 1e-07
gi|151301228 formin binding protein 3 [Homo sapiens] 54 1e-07
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 54 1e-07
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 53 3e-07
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 53 3e-07
gi|104526627 triadin [Homo sapiens] 53 3e-07
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 53 3e-07
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 52 5e-07
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 52 6e-07
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 52 6e-07
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 52 8e-07
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 52 8e-07
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 51 1e-06
gi|148746195 trichohyalin [Homo sapiens] 51 1e-06
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 51 1e-06
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 51 1e-06
>gi|131888281 hypothetical protein LOC55216 isoform b [Homo sapiens]
Length = 292
Score = 589 bits (1519), Expect = e-169
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR
Sbjct: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
Query: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE
Sbjct: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
Query: 121 FETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 180
FETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT
Sbjct: 121 FETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 180
Query: 181 ADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEE 240
ADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEE
Sbjct: 181 ADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEE 240
Query: 241 SEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
SEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD
Sbjct: 241 SEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
>gi|131889432 hypothetical protein LOC55216 isoform a [Homo sapiens]
Length = 293
Score = 585 bits (1507), Expect = e-167
Identities = 292/293 (99%), Positives = 292/293 (99%), Gaps = 1/293 (0%)
Query: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR
Sbjct: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
Query: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE
Sbjct: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
Query: 121 FETDS-DQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 179
FETDS DQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI
Sbjct: 121 FETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 180
Query: 180 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 239
TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE
Sbjct: 181 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
Query: 240 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD
Sbjct: 241 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
>gi|131889391 hypothetical protein LOC55216 isoform a [Homo sapiens]
Length = 293
Score = 585 bits (1507), Expect = e-167
Identities = 292/293 (99%), Positives = 292/293 (99%), Gaps = 1/293 (0%)
Query: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR
Sbjct: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
Query: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE
Sbjct: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
Query: 121 FETDS-DQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 179
FETDS DQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI
Sbjct: 121 FETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 180
Query: 180 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 239
TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE
Sbjct: 181 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
Query: 240 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD
Sbjct: 241 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 73.6 bits (179), Expect = 2e-13
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 43 AYRGTKRKMLPSSSSRMRSDGFDEESQRYYW----------RPKNEISGTLEDDFLKAKS 92
+YR R S R F S Y+ +P + ++ L+ K
Sbjct: 71 SYRSRSRSRSRERPSAPRGIPFASASSSVYYGSYSRPYGSDKPWPSLLDKEREESLRQKR 130
Query: 93 WNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQ----QDITNGKKTSPQVKSSTHESR 148
+++ E P+ WG L P+ E DSD+ +D K T+ S + +
Sbjct: 131 LSERERIGELGAPEVWG------LSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKK 184
Query: 149 KHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKK 208
K +SK+ KK++KK+S K++ K E +D +DS ++ S+E +K K+ K+KK
Sbjct: 185 KSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKKEKKKKH 244
Query: 209 SRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKRE 255
KK KK ++ + S DS+S S+E + K + K E
Sbjct: 245 RSKKYKKK-----RSKKSRKESSDSSSKESQEEFLENPWKDRTKAEE 286
Score = 44.3 bits (103), Expect = 1e-04
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 117 YPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEA 176
Y E+ ++DSD + T + + ++K KK +K K + KK K+ KKS+KE+
Sbjct: 209 YSEDSDSDSDSE-------TDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKES 261
Query: 177 TDITADSSSEFSEETGASGTRKGKQP 202
+D ++ S E E K ++P
Sbjct: 262 SDSSSKESQEEFLENPWKDRTKAEEP 287
Score = 35.0 bits (79), Expect = 0.078
Identities = 32/166 (19%), Positives = 65/166 (39%), Gaps = 17/166 (10%)
Query: 144 THESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSS----EFSEETGASGTRKG 199
TH+ + ++ + + RS +++ S + SSS +S G+
Sbjct: 57 THQLGGLSQGSRNQSYRSRSRSRSRERPSAPRGIPFASASSSVYYGSYSRPYGSDKPWPS 116
Query: 200 KQPHKRKKKSRKKSLKK---------PALFLEAESNTSHSDDSASSSSEESEERDTKKTK 250
+R++ R+K L + P ++ + N D + +E ++ T
Sbjct: 117 LLDKEREESLRQKRLSERERIGELGAPEVWGLSPKNPEPDSDEHTPVEDEEPKKSTTSAS 176
Query: 251 RKKREKKAHTSVANNEIQER----TNKRTNWKVATDERSAESSEDD 292
+ EKK +S + ++R ++KR + K + D S SE D
Sbjct: 177 TSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETD 222
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 67.0 bits (162), Expect = 2e-11
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 117 YPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKK------SHKKKQKKRSHKKQK 170
YPE TD++ D + + S +K ++ K K +KK S + + K S K +K
Sbjct: 366 YPES--TDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEK 423
Query: 171 KSKKEATDITADSSSEFSEETGASG-----TRKGKQPHKRKKKSRKKSLKKPALFLEAES 225
K KK++ S E T A ++KGK+ K+ KK KK KK AES
Sbjct: 424 KDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAES 483
Query: 226 NTSHSDDSASSSSEES-EERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDER 284
SD + S E++ +KK +K K ++ A + +T +T+ K+ +
Sbjct: 484 TEMESDLELKKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDT 543
Query: 285 SAESS 289
+E S
Sbjct: 544 ESEES 548
Score = 52.0 bits (123), Expect = 6e-07
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 132 NGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEET 191
N KK+S + + +S+ KK K KK KK KK K E+TD + S + ++T
Sbjct: 291 NAKKSSD---AESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDT 347
Query: 192 GASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKR 251
K K KK +KK KK + ES + + S + +++ + D KK
Sbjct: 348 K-------KDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDA 400
Query: 252 KK--------REKKAHTSVANNEIQERTNKRTNWK-VATDERSAESSED 291
KK E ++ S + + ++ +K N K V DE S ++ +
Sbjct: 401 KKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSE 449
Score = 50.8 bits (120), Expect = 1e-06
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 19/259 (7%)
Query: 32 KIRELEKQME--DAYRGT---KRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLED- 85
K ++++K E DA G +RK +++ D +++++Y E SG +D
Sbjct: 322 KKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTE-SGDAKDA 380
Query: 86 --DFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDS--DQQDI-TNGKKTSPQV 140
D K +K + + EL +E + D D++D T+ KK+
Sbjct: 381 RNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKND 440
Query: 141 KSSTH---ESRKHKKSKKSHKKKQKKRSHK--KQKKSKKEATDITADSSSEFSEETGASG 195
+ ST E + K K +KK KK S K K+K +KK A +S E ++ S
Sbjct: 441 EESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSK 500
Query: 196 TRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKRE 255
+KG + KK +RK + A F E+ + S ESEE K +KK +
Sbjct: 501 EKKGSK-KDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEESLYKPGAKKKID 559
Query: 256 KKAHTSVANNEIQERTNKR 274
+ TS AN++++ +KR
Sbjct: 560 ESDGTS-ANSKMEGLESKR 577
Score = 48.9 bits (115), Expect = 5e-06
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 124 DSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADS 183
D ++D+ KK + + + +S+ +K K KKK KK KK K E+TD
Sbjct: 320 DDKKKDV---KKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTD----- 371
Query: 184 SSEFSEETGASGTRKGKQPHKRKKKS--RKKSLKKPALFLEAESNTSHSDDSASSSSEES 241
+E A R + K+ K+ +KK KK ++ES + S E+
Sbjct: 372 ----TESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKE---SQKDEKK 424
Query: 242 EERDTKKTKRKKREKKAHTSVANNEIQ--ERTNKRTNWKVATDERSAESSED 291
+++D+K +K + ++ A++E + + K+ K D + + +D
Sbjct: 425 DKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKD 476
Score = 43.1 bits (100), Expect = 3e-04
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 151 KKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSR 210
+ + K++ K K + K KK+ K+++D ++ S + +++ K KK +
Sbjct: 270 QNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSK-------KVKKNVKKDDK 322
Query: 211 KKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQER 270
KK +KK +AES S + + ++ ++D KK KK + T + + ++
Sbjct: 323 KKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPES--TDTESGDAKDA 380
Query: 271 TNKRTNWKVAT 281
N N K A+
Sbjct: 381 RNDSRNLKKAS 391
Score = 40.0 bits (92), Expect = 0.002
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 27/120 (22%)
Query: 143 STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQP 202
S + S+ + + KK K++ KK ++D+ SE S++ K+
Sbjct: 269 SQNNSKNYSLKYTKYTKKDTKKNAKK-----------SSDAESEDSKD--------AKKD 309
Query: 203 HKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKR--KKREKKAHT 260
K+ KK+ KK KK + + ES + S DS + E +DTKK K+ KK +KK T
Sbjct: 310 SKKVKKNVKKDDKKKDVKKDTESTDAESGDS------KDERKDTKKDKKKLKKDDKKKDT 363
Score = 38.9 bits (89), Expect = 0.005
Identities = 39/189 (20%), Positives = 76/189 (40%), Gaps = 23/189 (12%)
Query: 122 ETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITA 181
ET+ + Q+ K Q ++ K ++ H K K+ K+ K S ++I +
Sbjct: 180 ETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICS 239
Query: 182 DSS--SEFSEETGASG---------TRKGKQPH---------KRKKKSRKKSLKKPALFL 221
++S +F G S R Q + K KK KK+ KK +
Sbjct: 240 ENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSS--- 296
Query: 222 EAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVAT 281
+AES S S +++ ++D KK KK + +++ + + K+ K+
Sbjct: 297 DAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKK 356
Query: 282 DERSAESSE 290
D++ ++ +
Sbjct: 357 DDKKKDTKK 365
Score = 38.5 bits (88), Expect = 0.007
Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 1/161 (0%)
Query: 83 LEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKS 142
+ F K W + P R ++ L E++ D++ T KK S +
Sbjct: 77 IRHSFRKILQWPPIYTAAREQTPFRHLYTSKTHLKKAEYKKSKDEKGGTPLKKDSKKKGG 136
Query: 143 STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQP 202
S + + K+ + K+Q + K S + + SSSE + E+ S T K
Sbjct: 137 SYATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQNSKT-VSKNC 195
Query: 203 HKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEE 243
++ KK K S K FL ++N + +S++ E
Sbjct: 196 SQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISE 236
Score = 31.2 bits (69), Expect = 1.1
Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 15/193 (7%)
Query: 91 KSWNKKFYDYEANMP-DRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRK 149
KSWN+K + P R + + L + T D++ + G+K P K H RK
Sbjct: 26 KSWNQKHFALTFPKPLQRGTNDKSRPLKSQITVTRHDKRKLEEGQK--PAHKWIRHSFRK 83
Query: 150 HKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKS 209
+ + +++ + SK T +E+ + G K+ K+K S
Sbjct: 84 ILQWPPIYTAAREQTPFRHLYTSK------THLKKAEYKKSKDEKGGTPLKKDSKKKGGS 137
Query: 210 RKKSLKKPALFLEAESNTSHSDDSASSSSEESEE-RDTKKTKRKKREKKAHTSVANNEIQ 268
+ + + E + +D + SS E+E+ + +K + E + +V+ N Q
Sbjct: 138 YATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQ 197
Query: 269 E-----RTNKRTN 276
+ + +K+TN
Sbjct: 198 KDKKDSKNSKKTN 210
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 66.2 bits (160), Expect = 3e-11
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 101 EANMPDRWGHSG-YKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKK 159
E P+ WG S + +L +E D++++T+ K +S S S +H+K K S +
Sbjct: 130 ELGAPEVWGPSPKFPQLDSDEHTPVEDEEEVTHQKSSS-----SDSNSEEHRKKKTSRSR 184
Query: 160 KQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPAL 219
+KKR +K K+ ++ +D +DS+SE + + +K + K+KKK + K+ KK
Sbjct: 185 NKKKRKNKSSKRKHRKYSD--SDSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNK 242
Query: 220 FLEAESNTSHSDDSASSSSE 239
+ ES+ S DS SE
Sbjct: 243 KTKKESSDSSCKDSEEDLSE 262
Score = 50.8 bits (120), Expect = 1e-06
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 109 GHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKK 168
G+ ++ Y EE ++ D + + ++ + + E + S K Q
Sbjct: 93 GYRYHRHCYAEERQSAEDYEKEESHRQRRLKERERIGELGAPEVWGPSPKFPQLDSDEHT 152
Query: 169 QKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTS 228
+ ++E T + SS SEE T + + KRK KS K+ +K + +++SN
Sbjct: 153 PVEDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRK---YSDSDSN-- 207
Query: 229 HSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAES 288
S+ +S S++ ++R K K+KK++KK T +++ NK+T K ++D +S
Sbjct: 208 -SESDTNSDSDDDKKR--VKAKKKKKKKKHKT-------KKKKNKKTK-KESSDSSCKDS 256
Query: 289 SED 291
ED
Sbjct: 257 EED 259
Score = 33.1 bits (74), Expect = 0.30
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
Query: 187 FSEETGASGTRKGKQPHKR---KKKSRKKSLKKPALF--------LEAESNTSHSDDS-- 233
++EE ++ + ++ H++ K++ R L P ++ L+++ +T D+
Sbjct: 101 YAEERQSAEDYEKEESHRQRRLKERERIGELGAPEVWGPSPKFPQLDSDEHTPVEDEEEV 160
Query: 234 ----ASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESS 289
+SSS SEE KKT R + +KK N+ +R +++ + + E S
Sbjct: 161 THQKSSSSDSNSEEHRKKKTSRSRNKKKR-----KNKSSKRKHRKYSDSDSNSESDTNSD 215
Query: 290 EDD 292
DD
Sbjct: 216 SDD 218
Score = 29.6 bits (65), Expect = 3.3
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 3/141 (2%)
Query: 67 ESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPE-EFETDS 125
E + K+ S + ++ K K+ + N + H Y + E +T+S
Sbjct: 155 EDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDSDSNSESDTNS 214
Query: 126 DQQDITNGKKTSPQVKSSTHESRK--HKKSKKSHKKKQKKRSHKKQKKSKKEATDITADS 183
D D K + K H+++K +KK+KK K S + ++ AD+
Sbjct: 215 DSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDSSCKDSEEDLSEATWMEQPNVADT 274
Query: 184 SSEFSEETGASGTRKGKQPHK 204
E T + ++P K
Sbjct: 275 MDLIGPEAPIIHTSQDEKPLK 295
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 63.2 bits (152), Expect = 3e-10
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 69 QRYYWRPK---NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGH----SGYKELYPEEF 121
Q Y RP+ E+ LE+ K+ +K ++E M + W S K L E
Sbjct: 31 QDYLNRPRPTWEEVKKQLENK----KTGSKALAEFEEKMNENWKKELEKSREKLLSGNES 86
Query: 122 ETDSDQQDITNGKKTS-PQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 180
+ ++ KK+ SS+ +S + +KKQ KR KK+ +S K + T
Sbjct: 87 SSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSST 146
Query: 181 ADSSSEFSE-----ETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSAS 235
+S SE E + T K K KK +K L E+ S + + +D +
Sbjct: 147 HESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQA 206
Query: 236 SSSEESEERDTKKTKRKKREKKAH 259
EER+ K K KK++KK H
Sbjct: 207 KKKRRCEEREQAKEKVKKKKKKQH 230
Score = 56.6 bits (135), Expect = 3e-08
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 146 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKR 205
E +K ++KK+ K + K + KKE E S E SG + +R
Sbjct: 43 EVKKQLENKKTGSKALAEFEEKMNENWKKEL---------EKSREKLLSGNESSSKKRER 93
Query: 206 KKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANN 265
KKK +KKS + + S++S SD S+SSS E EE+ K ++KK+ + +S ++
Sbjct: 94 KKKRKKKSCR-------SSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSST 146
Query: 266 EIQERTNKRTNWKVATDERSAESSED 291
E +K + K + E +D
Sbjct: 147 HESESESKESVKKKKKSKDETEKEKD 172
Score = 35.0 bits (79), Expect = 0.078
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 18/160 (11%)
Query: 32 KIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEI-------SGTLE 84
K RE +K+ + + S SS SD DEE ++ R K + S T E
Sbjct: 89 KKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHE 148
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHS---GYKELYPE------EFETDSDQQDITNGKK 135
+ +S KK + ++ S K+ YP+ E ++SD ++ KK
Sbjct: 149 SESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAKK 208
Query: 136 TSPQVKSSTHESRKHKKSKKSHKKKQKKRSHK--KQKKSK 173
+ + + KK KK HKK KK+ K KS+
Sbjct: 209 KRRCEEREQAKEKVKKKKKKQHKKHSKKKKKKSGSSHKSR 248
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 58.9 bits (141), Expect = 5e-09
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 69 QRYYWRPK---NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKE----LYPEEF 121
Q Y RP+ E+ LE K K +K ++E M + W K L E
Sbjct: 21 QDYLNRPRPTWEEVKEQLE----KKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSES 76
Query: 122 ETDSDQQDITNGKKT---------SPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKS 172
+ Q+ KK+ S SS+ +S K + +KK+K RSHK + S
Sbjct: 77 SSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESS 136
Query: 173 KKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDD 232
E + DS + ++ GT K K KK + S KP L E+ S + + ++
Sbjct: 137 MSETESDSKDSLKK--KKKSKDGTEKEKDIKGLSKKRKMYSEDKP-LSSESLSESEYIEE 193
Query: 233 SASSSSEESEERD--TKKTKRKK--------REKKAHTS 261
+ + SEER+ T+KTK+KK ++KKA +S
Sbjct: 194 VRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASS 232
Score = 51.2 bits (121), Expect = 1e-06
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 146 ESRKHKKSKKS-HKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHK 204
E KH++ S + KKR KK++K K ++ SSS+ S + S KQ +
Sbjct: 62 ELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKR 121
Query: 205 RKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE-ERDTKKTKRKKR---EKKAHT 260
RKKK + + E ES++ S S + +E E+D K +K++ E K +
Sbjct: 122 RKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLS 181
Query: 261 SVANNEIQERTNKRTNWKVATDER 284
S + +E + R K +++ER
Sbjct: 182 SESLSESEYIEEVRAKKKKSSEER 205
Score = 50.8 bits (120), Expect = 1e-06
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 134 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 193
+ + P ++ + R + K +K+KK S K +E + E E
Sbjct: 14 QSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGS--KALAEFEEKMNENWKKELEKHREKLL 71
Query: 194 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK 253
SG+ + +RKKK +KKS + + S++S SD S+SSS E E++ K +RKK
Sbjct: 72 SGSESSSKKRQRKKKEKKKSGRY------SSSSSSSSDSSSSSSDSEDEDKKQGK-RRKK 124
Query: 254 REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
++ ++H S ++ + ++ + + K + E D
Sbjct: 125 KKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKD 163
Score = 44.3 bits (103), Expect = 1e-04
Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 15/191 (7%)
Query: 25 QEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLE 84
++ ++ WK +ELEK E G++ SS R R ++S RY S +
Sbjct: 53 EKMNENWK-KELEKHREKLLSGSES----SSKKRQRKKKEKKKSGRY------SSSSSSS 101
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSST 144
D + S ++ + + + +K ET+SD +D KK S K T
Sbjct: 102 SDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKS---KDGT 158
Query: 145 HESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHK 204
+ + K K K + + + S+ E + + SEE T K K+ K
Sbjct: 159 EKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEER-EKATEKTKKKKK 217
Query: 205 RKKKSRKKSLK 215
KK S+KK K
Sbjct: 218 HKKHSKKKKKK 228
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 58.9 bits (141), Expect = 5e-09
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 69 QRYYWRPK---NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKE----LYPEEF 121
Q Y RP+ E+ LE K K +K ++E M + W K L E
Sbjct: 31 QDYLNRPRPTWEEVKEQLE----KKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSES 86
Query: 122 ETDSDQQDITNGKKT---------SPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKS 172
+ Q+ KK+ S SS+ +S K + +KK+K RSHK + S
Sbjct: 87 SSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESS 146
Query: 173 KKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDD 232
E + DS + ++ GT K K KK + S KP L E+ S + + ++
Sbjct: 147 MSETESDSKDSLKK--KKKSKDGTEKEKDIKGLSKKRKMYSEDKP-LSSESLSESEYIEE 203
Query: 233 SASSSSEESEERD--TKKTKRKK--------REKKAHTS 261
+ + SEER+ T+KTK+KK ++KKA +S
Sbjct: 204 VRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASS 242
Score = 51.2 bits (121), Expect = 1e-06
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 146 ESRKHKKSKKS-HKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHK 204
E KH++ S + KKR KK++K K ++ SSS+ S + S KQ +
Sbjct: 72 ELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKR 131
Query: 205 RKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE-ERDTKKTKRKKR---EKKAHT 260
RKKK + + E ES++ S S + +E E+D K +K++ E K +
Sbjct: 132 RKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLS 191
Query: 261 SVANNEIQERTNKRTNWKVATDER 284
S + +E + R K +++ER
Sbjct: 192 SESLSESEYIEEVRAKKKKSSEER 215
Score = 50.8 bits (120), Expect = 1e-06
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 134 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 193
+ + P ++ + R + K +K+KK S K +E + E E
Sbjct: 24 QSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGS--KALAEFEEKMNENWKKELEKHREKLL 81
Query: 194 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK 253
SG+ + +RKKK +KKS + + S++S SD S+SSS E E++ K +RKK
Sbjct: 82 SGSESSSKKRQRKKKEKKKSGRY------SSSSSSSSDSSSSSSDSEDEDKKQGK-RRKK 134
Query: 254 REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
++ ++H S ++ + ++ + + K + E D
Sbjct: 135 KKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKD 173
Score = 44.3 bits (103), Expect = 1e-04
Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 15/191 (7%)
Query: 25 QEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLE 84
++ ++ WK +ELEK E G++ SS R R ++S RY S +
Sbjct: 63 EKMNENWK-KELEKHREKLLSGSES----SSKKRQRKKKEKKKSGRY------SSSSSSS 111
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSST 144
D + S ++ + + + +K ET+SD +D KK S K T
Sbjct: 112 SDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKS---KDGT 168
Query: 145 HESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHK 204
+ + K K K + + + S+ E + + SEE T K K+ K
Sbjct: 169 EKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEER-EKATEKTKKKKK 227
Query: 205 RKKKSRKKSLK 215
KK S+KK K
Sbjct: 228 HKKHSKKKKKK 238
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 58.2 bits (139), Expect = 9e-09
Identities = 64/252 (25%), Positives = 99/252 (39%), Gaps = 31/252 (12%)
Query: 30 MWKIRELEKQME--DAYRGTKRKMLP--------SSSSRMRSDGFDEESQRYYWRPKNEI 79
+W R L + E Y +R+ L S ++ + G D+ +Q+ ++E+
Sbjct: 75 LWMYRSLMRISERPSVYLAARRQPLKPTRTVEVDSKAAEIGKKGEDKTTQKDTTDSESEL 134
Query: 80 SGTLEDDFLKAKSWNK-KFYDYEANMPDRWG----HSGYKELYPEEFETDSDQQDITNGK 134
+D K K K K +A + G G E E ++D K
Sbjct: 135 KQGKKDS-KKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDK 193
Query: 135 KTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGAS 194
K S + K S ES + +K +K K+ K KK K A ++ A + E +E G
Sbjct: 194 KDSNKGKDSATES----EGEKGGTEKDSKKGKKDSKKGKDSAIELQAVKADEKKDEDGKK 249
Query: 195 GTRKGKQPHKRKK-----KSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKT 249
KG + KK K KK KKP+ S S S D S++ +D KK
Sbjct: 250 DANKGDESKDAKKDAKEIKKGKKDKKKPS------STDSDSKDDVKKESKKDATKDAKKV 303
Query: 250 KRKKREKKAHTS 261
+K EK++ S
Sbjct: 304 AKKDTEKESADS 315
Score = 52.0 bits (123), Expect = 6e-07
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 128 QDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEF 187
+DI GK+ K + + +K + K + + +K +KK+ D S
Sbjct: 145 KDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNKGKDSAT 204
Query: 188 SEETGASGTRK-GKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDT 246
E GT K K+ K KK + +++ A+ + + + D+ + ++D
Sbjct: 205 ESEGEKGGTEKDSKKGKKDSKKGKDSAIELQAVKADEKKDEDGKKDANKGDESKDAKKDA 264
Query: 247 KKTKRKKREKKAHTSV---ANNEIQERTNK---RTNWKVA---TDERSAESSED 291
K+ K+ K++KK +S + +++++ + K + KVA T++ SA+S +D
Sbjct: 265 KEIKKGKKDKKKPSSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKD 318
Score = 47.4 bits (111), Expect = 2e-05
Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 41/248 (16%)
Query: 18 TDAHNKIQE-ESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPK 76
TD+ +++++ + D K +++EK E+ K + D E +
Sbjct: 128 TDSESELKQGKKDSKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATES--------E 179
Query: 77 NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSD----QQDITN 132
+E G +D+ K NK G E E+ T+ D ++D
Sbjct: 180 DEKGGAKKDNKKDKKDSNK-------------GKDSATESEGEKGGTEKDSKKGKKDSKK 226
Query: 133 GKKTSPQVKSSTHESRKHKKSKKSHKK-------KQKKRSHKKQKKSKKEATDITADSSS 185
GK ++ ++++ + +K + KK K K+ + KK KK KK+ + +DS
Sbjct: 227 GKDSAIELQAVKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPSSTDSDSKD 286
Query: 186 EFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERD 245
+ +E+ T+ K+ K+ + KK A ++ A ++++ ++D
Sbjct: 287 DVKKESKKDATKDAKKVAKKDTEKESADSKKDA--------KKNAKKDAKKDAKKNAKKD 338
Query: 246 TKKTKRKK 253
KK +KK
Sbjct: 339 EKKDAKKK 346
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 56.2 bits (134), Expect = 3e-08
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Query: 146 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKR 205
ES + K+ ++ K+K+++ +K+++ KKE E + ++G++ KR
Sbjct: 56 ESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKR 115
Query: 206 KKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANN 265
KKK +K+ + E E + + EER+ K+ +RK+R+K+ V
Sbjct: 116 KKKEKKERGRTSKEGKERERKEERKREERKERERKKEERE-KERERKERKKRERKQVGEK 174
Query: 266 EIQERTNKRTNWKVATDERSAESSE 290
E + + +R K R E
Sbjct: 175 EEERKEKERKERKKRERNRKERKKE 199
Score = 54.7 bits (130), Expect = 1e-07
Identities = 35/173 (20%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 122 ETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKK-RSHKKQKKSKKEATDIT 180
E +S+++ ++ + + + + KK KK +KK+++ R ++++K KE +
Sbjct: 54 ERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKE 113
Query: 181 ADSSSEFSEE--TGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSS 238
E E T G + ++ +++++ +++ KK E E +
Sbjct: 114 KRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGE 173
Query: 239 EESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 291
+E E ++ ++ +RKKRE+ E +ER ++ K +ER E +D
Sbjct: 174 KEEERKEKERKERKKRERNRKERKKERERKERRERKKERK-KKEERKKERQKD 225
Score = 53.5 bits (127), Expect = 2e-07
Identities = 51/247 (20%), Positives = 99/247 (40%), Gaps = 52/247 (21%)
Query: 32 KIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAK 91
+IRE E+++E G K + ES+R R + E K K
Sbjct: 37 EIREREREIETRKEGKKER----------------ESERKKERRERE----------KRK 70
Query: 92 SWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHK 151
+K E ++ G +E ++ + + ++ +K + K R K
Sbjct: 71 REREKERKRERGKKEKKGERKKEERERKKRRREKENKE--GEEKEKRKKKEKKERGRTSK 128
Query: 152 KSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRK 211
+ K+ +K+++KR +K+++ KKE + E E + G++ +RK+K RK
Sbjct: 129 EGKERERKEERKREERKERERKKE----EREKERERKERKKRERKQVGEKEEERKEKERK 184
Query: 212 KSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERT 271
+ K+ + E E R+ KK ++KK E+K + +
Sbjct: 185 ERKKR-----------ERNRKERKKERERKERRERKKERKKKEERKK---------ERQK 224
Query: 272 NKRTNWK 278
+++TNW+
Sbjct: 225 DRQTNWR 231
Score = 50.1 bits (118), Expect = 2e-06
Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 3/175 (1%)
Query: 119 EEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKS-KKSHKKKQKKRSHKKQKKSKKEAT 177
E E + +++ +K K E +K ++ KK ++K+ K +K+K+ KKE
Sbjct: 62 ERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKK 121
Query: 178 DITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSS 237
+ S E R+ ++ +RKK+ R+K ++ ++
Sbjct: 122 ERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKE- 180
Query: 238 SEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
+E +ER ++ RK+R+K+ +ER K K +R E +
Sbjct: 181 -KERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKE 234
Score = 46.2 bits (108), Expect = 3e-05
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 146 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKR 205
E+RK K ++ ++K+++R +K+K+ +++ E E G + ++ +R
Sbjct: 46 ETRKEGKKERESERKKERREREKRKREREK----------ERKRERGKKEKKGERKKEER 95
Query: 206 KKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEER----DTKKTKRKKREKKAHTS 261
++K R++ K+ E E +S+E +ER + K+ +RK+RE+K
Sbjct: 96 ERKKRRRE-KENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEER 154
Query: 262 VANNEIQERTNKRTNWKVATDERSAESSE 290
E +ER KR +V E + E
Sbjct: 155 EKERERKER-KKRERKQVGEKEEERKEKE 182
Score = 38.1 bits (87), Expect = 0.009
Identities = 38/199 (19%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 16 RHTDAHNKIQEESDMWKIRELEKQMEDAYRGTK--RKMLPSSSSRMRSDGFDEESQRYYW 73
R ++ + +E + RE E++ E + K RK + R + ++E +
Sbjct: 55 RESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEK 114
Query: 74 RPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNG 133
R K E ++ +K ++ E +R KE E E + ++
Sbjct: 115 RKKKE----KKERGRTSKEGKERERKEERKREERKERERKKE--EREKERERKERKKRER 168
Query: 134 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 193
K+ + + + RK +K ++ ++K++KK +K+++ +K+ + E ++
Sbjct: 169 KQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQT 228
Query: 194 SGTRKGKQPHKRKKKSRKK 212
+ + K+ KR++K RKK
Sbjct: 229 NW--REKERGKRERKERKK 245
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 146 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKR 205
E RK KK KK ++KQ+ R +K+KK +KE R+ KQ +R
Sbjct: 93 ERRKRKKEKKKRERKQRGRRERKKKKERKERE-------------------RENKQRRER 133
Query: 206 KKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK-RKKREKKAHTSVAN 264
K+K R+K ++ E + + EER+ K+ + RK+R+K+
Sbjct: 134 KRKKRRKKKRRK----ERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERR 189
Query: 265 NEIQERTNKRTNWKVATDERSAESSED 291
+ER +R K +R + D
Sbjct: 190 ERKKERKKERRKKKERKKDRKTDRQTD 216
Score = 53.1 bits (126), Expect = 3e-07
Identities = 34/173 (19%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 120 EFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 179
+ T+ ++ K Q +S + R+ ++ +K ++K++KR K++K K++ +
Sbjct: 12 KLNTELQMVSCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRER 71
Query: 180 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 239
+ + E R+ K+ KRKK+ +K+ K+ + E
Sbjct: 72 GKERERKRKEREKQRKERREKERRKRKKEKKKRERKQ-----RGRRERKKKKERKERERE 126
Query: 240 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
+ R+ K+ KR+K++++ E +R KR K E+ E + +
Sbjct: 127 NKQRRERKRKKRRKKKRRKERK-REKERGKRERKRKKRKKEEREKKRERNRKE 178
Score = 53.1 bits (126), Expect = 3e-07
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 17/156 (10%)
Query: 134 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 193
K+ + + ++ +K KK KK+++K+ ++++K KKE +
Sbjct: 78 KRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKE--------------- 122
Query: 194 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERD-TKKTKRK 252
R+ KQ +RK+K R+K ++ E E E ++R+ +K ++K
Sbjct: 123 -RERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKK 181
Query: 253 KREKKAHTSVANNEIQERTNKRTNWKVATDERSAES 288
+RE+K +ER K+ K +R +S
Sbjct: 182 ERERKERRERKKERKKERRKKKERKKDRKTDRQTDS 217
Score = 47.8 bits (112), Expect = 1e-05
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 28/125 (22%)
Query: 133 GKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETG 192
G++ + K R++K+ ++ +KK++K+ +K++K +KE
Sbjct: 110 GRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKE----------------- 152
Query: 193 ASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRK 252
+GK+ KRKK+ +++ KK E N +++ KK +RK
Sbjct: 153 -----RGKRERKRKKRKKEEREKK------RERNRKERKKERERKERRERKKERKKERRK 201
Query: 253 KREKK 257
K+E+K
Sbjct: 202 KKERK 206
Score = 43.9 bits (102), Expect = 2e-04
Identities = 43/192 (22%), Positives = 76/192 (39%), Gaps = 13/192 (6%)
Query: 25 QEESDMWKIR-ELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTL 83
Q ES+ K R E EK+ + + KR+ + + +E +R + +
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERR 90
Query: 84 EDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSS 143
E + K K KK + +R KE E + ++ KK + K
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKRE 150
Query: 144 THESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPH 203
++ +K KK K++++K+ + +K+ KKE E +K ++
Sbjct: 151 KERGKRERKRKKRKKEEREKKRERNRKERKKE------------RERKERRERKKERKKE 198
Query: 204 KRKKKSRKKSLK 215
+RKKK RKK K
Sbjct: 199 RRKKKERKKDRK 210
Score = 43.9 bits (102), Expect = 2e-04
Identities = 33/180 (18%), Positives = 74/180 (41%), Gaps = 8/180 (4%)
Query: 120 EFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 179
E E ++++ K+ + + ++ KK KK + K+++R K+++K +KE +
Sbjct: 33 ESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREK 92
Query: 180 TADSSSEFSE--ETGASGTRKGKQPHKRK------KKSRKKSLKKPALFLEAESNTSHSD 231
+ + E G R+ K+ +RK K+ R++ KK + +
Sbjct: 93 ERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKE 152
Query: 232 DSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 291
+ +++ ++ KR++ K+ E +ER +R + ER + D
Sbjct: 153 RGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTD 212
Score = 32.3 bits (72), Expect = 0.51
Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 3/144 (2%)
Query: 32 KIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAK 91
K +E EKQ ++ +RK R R E ++ R + E + + K
Sbjct: 78 KRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKK 137
Query: 92 SWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHK 151
KK +R ++ +E + +++ N K+ + + RK +
Sbjct: 138 RRKKKRRKERKREKERGKRERKRKKRKKE---EREKKRERNRKERKKERERKERRERKKE 194
Query: 152 KSKKSHKKKQKKRSHKKQKKSKKE 175
+ K+ KKK++K+ K +++ +
Sbjct: 195 RKKERRKKKERKKDRKTDRQTDSQ 218
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 54.7 bits (130), Expect = 1e-07
Identities = 51/276 (18%), Positives = 112/276 (40%), Gaps = 24/276 (8%)
Query: 26 EESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLED 85
+E D R EK+M +G + + + S G D+E R + K S + E
Sbjct: 471 KERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEH 530
Query: 86 DFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTH 145
D K+K +++ G Y +S ++ + + S +V+S TH
Sbjct: 531 DHSKSKEKDRRAQSRSRECDITKGKHSY----------NSRTRERSRSRDRSRRVRSRTH 580
Query: 146 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSS---------SEFSEETGASGT 196
+ R +SK+ H+ ++++ + + +S++ T S S SE +
Sbjct: 581 D-RDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSR 639
Query: 197 RKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREK 256
K K ++ K S +K + + ++S +S +++ + ++ K K+ ++
Sbjct: 640 NKDKYRNQESKSSHRKENSESEKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQSSQDN 699
Query: 257 KAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
+ +S+ N+ E+ V + + ++ E+D
Sbjct: 700 ELKSSMLKNKEDEKIRS----SVEKENQKSKGQEND 731
Score = 48.1 bits (113), Expect = 9e-06
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 25/137 (18%)
Query: 155 KSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGT-------------RKGKQ 201
KS KK++K+ HK S ++D + S S+ S ++ S + RK +
Sbjct: 180 KSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSR 239
Query: 202 PHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSS------------EESEERDTKKT 249
HK++KK RKKS K + EAE+ + + + + D K+
Sbjct: 240 KHKKEKKKRKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKER 299
Query: 250 KRKKREKKAHTSVANNE 266
K ++RE++ + N++
Sbjct: 300 KNRERERERECNPPNSQ 316
Score = 45.4 bits (106), Expect = 6e-05
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 154 KKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKS 213
K KK++KKR HK S ++D + S S+ S ++ S + ++ KRKKK RK S
Sbjct: 180 KSKVKKEEKKR-HKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNS 238
Query: 214 LKKPALFLEAESNTSHSDDSASSSSE-ESEERDTKKTKR 251
K + + S SASS SE E+ E + T R
Sbjct: 239 RKHK----KEKKKRKKSKKSASSESEAENLEAQPQSTVR 273
Score = 43.9 bits (102), Expect = 2e-04
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 202 PHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTS 261
P + KK KK K + + S++ S DS SSS E T++ K KKR+KK H
Sbjct: 179 PKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEE-KSKKRKKK-HRK 236
Query: 262 VANNEIQERTNKRTNWKVATDERSAESSE 290
+ +E+ ++ + K A+ E AE+ E
Sbjct: 237 NSRKHKKEKKKRKKSKKSASSESEAENLE 265
Score = 42.0 bits (97), Expect = 6e-04
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 123 TDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKK--KQKKRSHKKQKKSKKEATDIT 180
+DSD + S +S+T E K KK KK H+K ++ K+ KK+KKSKK A +
Sbjct: 202 SDSDSSSDSQSSSDSSDSESATEE--KSKKRKKKHRKNSRKHKKEKKKRKKSKKSA---S 256
Query: 181 ADSSSEFSEETGASGTRKGKQP---------HKRKKKSRKKSLKKPALFLEAESNTSHSD 231
++S +E E S R + P K K+ +K K E E N +S
Sbjct: 257 SESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKERKNRERERERECNPPNSQ 316
Query: 232 DSA 234
++
Sbjct: 317 PAS 319
Score = 39.7 bits (91), Expect = 0.003
Identities = 57/300 (19%), Positives = 114/300 (38%), Gaps = 31/300 (10%)
Query: 18 TDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKN 77
+D+ + +E+S K + + + KRK S+S S+ + E+Q
Sbjct: 217 SDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSASS-ESEAENLEAQPQSTVRPE 275
Query: 78 EISGTLEDDFLKAKSWNK----------KFYDYEANMPDRWGHSGYKELYPEEFETDSDQ 127
EI E+ FL KS K + + E N P+ S + L T S +
Sbjct: 276 EIPPIPENRFLMRKSPPKADEKERKNRERERERECNPPNSQPASYQRRL----LVTRSGR 331
Query: 128 QDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQ--------KKSKKEATDI 179
+ G + S R + H +++ +R+ + + K K E +I
Sbjct: 332 KIKGRGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEI 391
Query: 180 TADSSS-------EFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDD 232
+ S + ++ S + K ++K K K + K+ + +E + + +
Sbjct: 392 KENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNK 451
Query: 233 SASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
+ +S + +K+K K+R+ K H ++ R+ R + V E+ ++S D
Sbjct: 452 VKKRAKSKSRSKSKEKSKSKERDSK-HNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKD 510
Score = 39.7 bits (91), Expect = 0.003
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 123 TDSDQQDITNGKKTSPQVKSSTHESRKHKKS--KKSHKKKQKKRSHKK------QKKSKK 174
TD + +K + K H+S ++ + S K + K KK + KSK+
Sbjct: 407 TDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKE 466
Query: 175 EATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSA 234
++ DS +EE KG+ H+ K+ K+S K + S S + +
Sbjct: 467 KSKSKERDSKHNRNEEKRMRSRSKGRD-HENVKEKEKQSDSK-----GKDQERSRSKEKS 520
Query: 235 SSSSEESEERDTKKTKRKKREKKAHTSVAN-NEIQERTNKRTNWKVATDERS 285
+S E D K+K K R ++ + + + + N RT + + +RS
Sbjct: 521 KQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRS 572
Score = 38.1 bits (87), Expect = 0.009
Identities = 47/270 (17%), Positives = 99/270 (36%), Gaps = 52/270 (19%)
Query: 69 QRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQ 128
+R+ K+E++ E+ + +K D+ N+ + KE ++ +++S ++
Sbjct: 378 ERWIKGDKSELNEIKENQRSPVRVKERKITDHR-NVSESPNRKNEKEKKVKDHKSNSKER 436
Query: 129 DITNGKKTSPQVKSSTHESRKHK-KSKKSHKKKQKKRSHK-------------------- 167
DI + + K+ + K K +SK K K K+R K
Sbjct: 437 DIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHEN 496
Query: 168 ---KQKKSKKEATDITADSSSEFSEETGASGTR-----------------------KGKQ 201
K+K+S + D S E S++ + KGK
Sbjct: 497 VKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKH 556
Query: 202 PHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTS 261
+ + + R +S + S T D S S E++ ++ + + R ++ T
Sbjct: 557 SYNSRTRERSRSRDRSR---RVRSRTHDRDRSRSKEYHRYREQEYRR-RGRSRSRERRTP 612
Query: 262 VANNEIQERTNKRTNWKVATDERSAESSED 291
+ ++R +R + + + E S ++D
Sbjct: 613 PGRSRSKDRRRRRRDSRSSEREESQSRNKD 642
Score = 35.8 bits (81), Expect = 0.046
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 114 KELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSK 173
K+ + + S D + + SS ES +KSKK +KK+ +++ +K KK K
Sbjct: 188 KKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKK--RKKKHRKNSRKHKKEK 245
Query: 174 KEATDITADSSSEFSEE 190
K+ +SSE E
Sbjct: 246 KKRKKSKKSASSESEAE 262
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 54.3 bits (129), Expect = 1e-07
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 7/182 (3%)
Query: 114 KELYPEEFETDSDQQ---DITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQK 170
+E E E D + + +T +K K E +K KK +K K ++ + HKK K
Sbjct: 197 QEYVASEGEEDPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKDRKKKKFQKSRSKHKKHK 256
Query: 171 KSKKEATDITADSSSEFSEETGAS-GTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSH 229
S ++ ++ SS+E SE + S K K+ ++K+K K S + E + +
Sbjct: 257 SSSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKKR 316
Query: 230 SDDSASSSSEESEERDTKKTKRKKREKKAHTSV---ANNEIQERTNKRTNWKVATDERSA 286
SSS + E+ +K + K E S ++++ + RT+K + K ++ +
Sbjct: 317 KLHEELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRGSERKEG 376
Query: 287 ES 288
S
Sbjct: 377 SS 378
Score = 45.4 bits (106), Expect = 6e-05
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 197 RKGKQPHKRKK--KSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKR 254
+K K+ K+KK KSR K K + + S++S S S SS ESE + +K ++K+
Sbjct: 234 KKKKKDRKKKKFQKSRSKHKKHKSSSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKK 293
Query: 255 EKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 291
KK S NN E +K K+ + S+ + +
Sbjct: 294 RKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHNRE 330
Score = 44.3 bits (103), Expect = 1e-04
Identities = 56/261 (21%), Positives = 101/261 (38%), Gaps = 38/261 (14%)
Query: 12 RNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRY 71
+ ++R D K +++ D R+ +K + + K K SSSS S E S
Sbjct: 222 QKLLRKLDRLEKKKKKKD----RKKKKFQKSRSKHKKHKSSSSSSSSSSSSSSTETS--- 274
Query: 72 YWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDIT 131
E S E + + K KK + + GH+ +DS+++D +
Sbjct: 275 ------ESSSESESNNKEKKIQRKKRKKNKCS-----GHNN----------SDSEEKDKS 313
Query: 132 NGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEET 191
+K ++ SS+H +R+ K K K + R K S + T S E +
Sbjct: 314 KKRKLHEEL-SSSHHNREKAKEKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPE---KR 369
Query: 192 GASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEER----DTK 247
G+ + H R+++SR+ + P + + E+ + S ++ R D
Sbjct: 370 GSERKEGSSRSHGREERSRRSRSRSPGSYKQRETRKRAQRNPGEEQSRRNDSRSHGTDLY 429
Query: 248 KTKRKKREKK--AHTSVANNE 266
+ ++ RE HT V E
Sbjct: 430 RGEKMYREHPGGTHTKVTQRE 450
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 119 EEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATD 178
EE E + +++ K+ + K T E+ K K+ ++ KK+++KR KK+++ ++E +
Sbjct: 21 EEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEE 80
Query: 179 ITADSSSEFSEETGASGTRKGKQPHK-----RKKKSRKKSLKK 216
+ E +E G +K K+ K +KKK R+K+ KK
Sbjct: 81 EEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 53.9 bits (128), Expect = 2e-07
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 167 KKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAE-- 224
KK+KK KKE + + + E EE G RK K+ KRK+K +KK K+ E E
Sbjct: 1 KKKKKKKKETEE--TEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEE 58
Query: 225 -----------SNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNK 273
++ EE EE + ++ +R+K++KK E +++ +
Sbjct: 59 EKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRR 118
Query: 274 RTNWK 278
+T K
Sbjct: 119 KTKKK 123
Score = 53.9 bits (128), Expect = 2e-07
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 20/141 (14%)
Query: 134 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 193
KK + T E+ + ++ ++ K+++KR K+++K KK+ T T
Sbjct: 3 KKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETE------------ 50
Query: 194 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK 253
RK K+ ++K+K ++K K E E ++ EE +E ++ K+KK
Sbjct: 51 --KRKEKEEEEKKRKRKRKKKK------EEEEREEEEEEEEEEKEEEEKEEGRRRKKKKK 102
Query: 254 REKKAHTSVANNEIQERTNKR 274
R +K + + +T K+
Sbjct: 103 RRRKEEEEEKKKKRRRKTKKK 123
Score = 51.6 bits (122), Expect = 8e-07
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 28/144 (19%)
Query: 114 KELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSK 173
KE E ++++++ GK+ + K E K KK+K++ K+K+K+ KK+K+ +
Sbjct: 8 KETEETEETEETEEEEEKEGKRKEKR-KEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKR 66
Query: 174 KEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDS 233
K+ + + E EE + K+ +R+KK +K+ K+
Sbjct: 67 KKKKE--EEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKE----------------- 107
Query: 234 ASSSSEESEERDTKKTKRKKREKK 257
EE + KK +R+K +KK
Sbjct: 108 --------EEEEKKKKRRRKTKKK 123
Score = 34.3 bits (77), Expect = 0.13
Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 205 RKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVAN 264
+KKK +KK ++ E+ + ++ +E + K+ ++KK+ K+
Sbjct: 1 KKKKKKKKETEETE-----ETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEK 55
Query: 265 NEIQERTNKRTNWKVATDERSAESSEDD 292
E +++ ++ K +ER E E++
Sbjct: 56 EEEEKKRKRKRKKKKEEEEREEEEEEEE 83
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 54.3 bits (129), Expect = 1e-07
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 145 HESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSS----EFSEETGA---SGTR 197
HE + H K H KK KK H+K+ +S+ + DS S + SE A S +
Sbjct: 775 HECQHHHSKNKKHSKKSKKH-HRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSA 833
Query: 198 KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKK 257
+ ++ +K+ KK +KKS K+ H DS S +E +++ K + +K +
Sbjct: 834 ESERSYKKSKKHKKKSKKR-----------RHKSDSPESDAEREKDKKEKDRESEKDRTR 882
Query: 258 AHTSVANNEIQERTNKRT-NWKVATDERS 285
+ + +++T K + NW + E S
Sbjct: 883 QRSESKHKSPKKKTGKDSGNWDTSGSELS 911
Score = 54.3 bits (129), Expect = 1e-07
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
Query: 146 ESRKH-KKSKKSHKKKQKKRS---------HKKQKKSKKEATDITADSSSEFSEETGASG 195
+++KH KKSKK H+K+ + RS H K+K+ + E+ + SSS SE +
Sbjct: 783 KNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERS---- 838
Query: 196 TRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSD-DSASSSSEESEERDTKKTKRKKR 254
K + HK+K K R+ P E E + D +S + + E K K+K
Sbjct: 839 -YKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTG 897
Query: 255 EKKAHTSVANNEIQE 269
+ + + +E+ E
Sbjct: 898 KDSGNWDTSGSELSE 912
Score = 47.0 bits (110), Expect = 2e-05
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 26/238 (10%)
Query: 20 AHNKIQEESDMWKIRELEKQMEDAYRGTKRK------MLPSSSSRMRSDGFDEESQRYYW 73
A N + E+++ RE E++ E+A R KRK ML ++ + D E+ + +
Sbjct: 693 AFNSLLEKAEA---REREREKEEA-RKMKRKESAFKSMLKQAAPPIELDAVWEDIRERFV 748
Query: 74 RPKNEISGTLED-------DFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSD 126
+ TLE DF+ + + + + +++ +DSD
Sbjct: 749 KEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSD 808
Query: 127 QQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSE 186
D + KK S E +S++S+KK +K + K+++ K ++ + A+ +
Sbjct: 809 DDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKD 868
Query: 187 FSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEER 244
E+ S + +Q + K KS KK K ++ + D S S SE E+
Sbjct: 869 KKEKDRESEKDRTRQRSESKHKSPKKKTGK---------DSGNWDTSGSELSEGELEK 917
Score = 33.5 bits (75), Expect = 0.23
Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 38/173 (21%)
Query: 146 ESRKHKKSKKSHKKKQKK----RSHKKQKKSKKEATDITADSSSEFSEETG-----ASGT 196
E+R+ ++ K+ +K ++K +S KQ E + D F +E
Sbjct: 702 EAREREREKEEARKMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLESE 761
Query: 197 RKG-------------KQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEE 243
RK + H + KK KKS K H S S S +S++
Sbjct: 762 RKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKH------------HRKRSRSRSGSDSDD 809
Query: 244 RDTKKTKRKKREKKA----HTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
D+ K+++R + H+S A +E + +K+ K ++S E D
Sbjct: 810 DDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESD 862
Score = 33.5 bits (75), Expect = 0.23
Identities = 20/91 (21%), Positives = 37/91 (40%)
Query: 201 QPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHT 260
Q H K K K KK + S SDD S S ++ + +++ ++
Sbjct: 778 QHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESER 837
Query: 261 SVANNEIQERTNKRTNWKVATDERSAESSED 291
S ++ ++ +K+ K + E AE +D
Sbjct: 838 SYKKSKKHKKKSKKRRHKSDSPESDAEREKD 868
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 54.3 bits (129), Expect = 1e-07
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 18/190 (9%)
Query: 116 LYPEEFETDSDQQDITNGKKTSPQV----------------KSSTHESRKHKKSKKSHKK 159
L PE+ D D++ + SP+ + S +E RKH+ +S +
Sbjct: 11 LAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEG 70
Query: 160 KQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPAL 219
++ + K KK K E + SS + E +S G+ HKRK++ +
Sbjct: 71 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSS--ENGEDRHKRKERKSSRGRSHSRS 128
Query: 220 FLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKV 279
+ S S + S S E + ++ R++++ ++ + I+ R+ R+ +
Sbjct: 129 RSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 188
Query: 280 ATDERSAESS 289
T RS S
Sbjct: 189 RTRSRSRTRS 198
Score = 42.7 bits (99), Expect = 4e-04
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 135 KTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGAS 194
K+S + KS H ++H K + + + K+ +++++ + S S E S
Sbjct: 78 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRS 137
Query: 195 GTRKGKQPHKR-------------KKKSRKKSL-KKPALFLEAESNTSHSDDSASSSSEE 240
+R+ K+ R +KKSR +S +K + + S + H + S S
Sbjct: 138 RSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTR 197
Query: 241 SEERDTKKTKRKKR 254
S RD KK K R
Sbjct: 198 SRSRDRKKRIEKPR 211
>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
Length = 360
Score = 53.1 bits (126), Expect = 3e-07
Identities = 31/111 (27%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 151 KKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQP---HKRKK 207
+K +S + + + S K++KKS+K+ + + S+S+ + + A G P + K+
Sbjct: 130 RKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEASPSPCITERSKQ 189
Query: 208 KSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTK-KTKRKKREKK 257
K+R+++ + + S++S S S+SSSS + ++ K K KR+K++KK
Sbjct: 190 KARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKK 240
Score = 38.5 bits (88), Expect = 0.007
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 125 SDQQDITNGKKTSPQVKSSTHESRKHKKSKKSH---------KKKQKKRSHKKQKKSKKE 175
S+++ + K TS +ST + RK + + + KQK R + S
Sbjct: 144 SEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEASPSPCITERSKQKARRRTRSSSSSSS 203
Query: 176 ATDITADSSSEFSEETGASGTRK-GKQPHKRKKKSRKKSLKK-------PALFLEAESNT 227
++ ++ SSS S + + G +K GK KR+KK KK KK A + E+
Sbjct: 204 SSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKK--KKKRKKLKKKGKEKAEAQQVEALP 261
Query: 228 SHSDDSASSSSEESEERDTKKTKRKKR 254
S D S+ E E+ ++K R
Sbjct: 262 GPSLDQWHRSAGEEEDGPVLTDEQKSR 288
Score = 38.1 bits (87), Expect = 0.009
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 123 TDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITAD 182
+ S ++ +S SS ++ K K KKK+K++ KK+ K K EA + A
Sbjct: 201 SSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEAL 260
Query: 183 SSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE 242
+ ++G + ++KSR +++K T D+ S +
Sbjct: 261 PGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMK---------PMTKEEWDARQSIIRKVV 311
Query: 243 ERDTKKTKRKKREKKAHTSVANNEIQERTNKR 274
+ +T +T+ K + + + E NK+
Sbjct: 312 DPETGRTRLIKGDGEVLEEIVTKERHREINKQ 343
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 53.1 bits (126), Expect = 3e-07
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 122 ETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITA 181
E +S + + G ++ +S + S K +K + K + RSH + + +K+
Sbjct: 294 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDR----- 348
Query: 182 DSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEES 241
R+ K PHK++ KSR++ + + SHS D + E+
Sbjct: 349 ---------------RRSKSPHKKRSKSRERRKSR---------SRSHSRDKRKDTREKI 384
Query: 242 EERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 291
+E++ + K K REK+ + +ER + K +R + +D
Sbjct: 385 KEKE--RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKD 432
Score = 52.0 bits (123), Expect = 6e-07
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 143 STHESRKHKKSKKSHKKKQKKRS-HKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQ 201
S H SR H +S+ K +++ +S HKK+ KS++ + S + ++T K +
Sbjct: 331 SKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERV 390
Query: 202 PHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTS 261
K ++K R++ ++ E E + D ++ E+D +K K K RE++
Sbjct: 391 KEKDREKEREREKER-----EKEKERGKNKDR-----DKEREKDREKDKEKDREREREKE 440
Query: 262 VANNEIQERTNKRTNWKVATDERSAESSE 290
+ +E+ ++ K +RS E E
Sbjct: 441 HEKDRDKEKEKEQDKEKEREKDRSKEIDE 469
Score = 49.7 bits (117), Expect = 3e-06
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 119 EEFETDSDQQDITNGKKTSPQVKSSTHE-SRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 177
+E E D D++ K + K + E K KK KKS + + ++ + S +E
Sbjct: 439 KEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERR 498
Query: 178 DITADSSSEFSEETGASGTRKGKQ---PHKRKKKSRKKSLKKPALF--LEAESNTSHSDD 232
+ SSS S T + RK + P R KK +K+ ++ + E E +TS
Sbjct: 499 RRRSRSSSR-SPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKS 557
Query: 233 SASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRT 275
S +E E+++ K K+ K+ +SV + E+ ++ RT
Sbjct: 558 SNDRDGKEKLEKNSTSLKEKEHNKEPDSSV-SKEVDDKDAPRT 599
Score = 45.4 bits (106), Expect = 6e-05
Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 13/180 (7%)
Query: 123 TDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQK--------KSKK 174
+ S + ++ + S Q +S K+SK ++K + RSH + K K K+
Sbjct: 329 SQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKE 388
Query: 175 EATDITADSSSEFSEETGASGTR-KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDS 233
+ + E +E R K K K ++K R+K +K + + D
Sbjct: 389 RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKE 448
Query: 234 ASSSSEESEERDTKKTK----RKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESS 289
++ +ER+ ++K ++K++KK+ T + R+ + + RS+ S
Sbjct: 449 KEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRS 508
Score = 44.7 bits (104), Expect = 1e-04
Identities = 55/269 (20%), Positives = 103/269 (38%), Gaps = 36/269 (13%)
Query: 16 RHTDAHNKIQE-----ESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQR 70
+ D KI+E E D K RE EK+ E K K + R +++ +R
Sbjct: 376 KRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRER 435
Query: 71 YYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDI 130
+ E + D K K +K+ + DR KE+ E+ + D +
Sbjct: 436 -----EREKEHEKDRDKEKEKEQDKE----KEREKDR-----SKEI-DEKRKKDKKSRTP 480
Query: 131 TNGKKTSPQVKSSTHESRKHK--------KSKKSHKKKQKKRSHKKQKKSKKEATDITAD 182
S + +SS+ E R+ + ++ K+ K+K + + + K + + D
Sbjct: 481 PRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERD 540
Query: 183 SSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE 242
SE E ++ RK K+K K S + H+ + SS S+E +
Sbjct: 541 HISERRERERSTSMRKSSNDRDGKEKLEKNS--------TSLKEKEHNKEPDSSVSKEVD 592
Query: 243 ERDTKKTKRKKREKKAHTSVANNEIQERT 271
++D +T+ K + + + + +T
Sbjct: 593 DKDAPRTEENKIQHNGNCQLNEENLSTKT 621
Score = 42.4 bits (98), Expect = 5e-04
Identities = 34/181 (18%), Positives = 76/181 (41%), Gaps = 9/181 (4%)
Query: 119 EEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATD 178
+E E + ++ + K + + E + ++ +K H+K + K K+Q K K+ D
Sbjct: 403 KEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKD 462
Query: 179 ITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSS 238
+ + + ++ + + +R + S ++ ++ + TS + SS S
Sbjct: 463 RSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS 522
Query: 239 EESEERDTKKTKRKK--------REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSE 290
R+ K KR+K RE++ TS+ + +R K K +T + E ++
Sbjct: 523 PSPRSRNKKDKKREKERDHISERRERERSTSMRKSS-NDRDGKEKLEKNSTSLKEKEHNK 581
Query: 291 D 291
+
Sbjct: 582 E 582
Score = 37.0 bits (84), Expect = 0.021
Identities = 31/187 (16%), Positives = 69/187 (36%), Gaps = 32/187 (17%)
Query: 105 PDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKR 164
P + HS + P E + +++ K + +S + + + K + +K + R
Sbjct: 250 PLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSR 309
Query: 165 SHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAE 224
SH + K +R + H R+K+S+ K +
Sbjct: 310 SHTRSK-------------------------SRSSSKSHSRRKRSQSKHRSR-------S 337
Query: 225 SNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDER 284
N S S S+ ++ +K +R+K ++H+ + +E+ ++ K E+
Sbjct: 338 HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREK 397
Query: 285 SAESSED 291
E ++
Sbjct: 398 EREREKE 404
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 53.1 bits (126), Expect = 3e-07
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 25/155 (16%)
Query: 119 EEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATD 178
E+ E D +D G+ P ++ K +K +K +K Q K +HK+++K K++ +
Sbjct: 117 EDEEDDDGDEDTDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKVRE 176
Query: 179 ITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSS 238
K K K K + + +KP E+ T + + ++
Sbjct: 177 -------------------KEKPEKKATHKEKIEKKEKP------ETKTLAKEQKKAKTA 211
Query: 239 EESEERDTKKTKRKKREKKAHTSVANNEIQERTNK 273
E+SEE+ K+ K K+EK T+ E+Q+ +K
Sbjct: 212 EKSEEKTKKEVKGGKQEKVKQTAAKVKEVQKTPSK 246
Score = 43.5 bits (101), Expect = 2e-04
Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 25/266 (9%)
Query: 37 EKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKK 96
E++ + +G K++ + ++++++ E Q+ +PK + ++ +K K
Sbjct: 215 EEKTKKEVKGGKQEKVKQTAAKVK------EVQKTPSKPKEKED---KEKAAVSKHEQKD 265
Query: 97 FYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKS 156
Y + M D + H K + + SP ++ E +K +K S
Sbjct: 266 QYAFCRYMIDIFVHGDLKPGQSPAIPPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTS 325
Query: 157 HKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRK---KS 213
KK++K KK K K+ A D+ + SE GT K KK +K K
Sbjct: 326 ETKKKEKEDIKK-KSEKETAIDVEKKEPGKASETK--QGTVKIAAQAAAKKDEKKEDSKK 382
Query: 214 LKKPALF-----LEAESNTSHSDDSASSSSEESEERDTK---KTKRKKREKKAHT--SVA 263
KKPA + E H + + S E S D + KT+R K E A +
Sbjct: 383 TKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAV 442
Query: 264 NNEIQERTNKRTNWKVATDERSAESS 289
+ +E+T K ++ ++ SS
Sbjct: 443 PGKKEEKTTKTVEQEIRKEKSGKTSS 468
Score = 39.3 bits (90), Expect = 0.004
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 122 ETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKK--QKKSKKEATDI 179
E D+ + + Q K + E K K+ + +K +KK +HK+ +KK K E +
Sbjct: 142 EIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKVREKEKPEKKATHKEKIEKKEKPETKTL 201
Query: 180 TAD----SSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSAS 235
+ ++E SEE + GKQ ++ ++ K ++K S +D
Sbjct: 202 AKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKEVQK------TPSKPKEKEDKEK 255
Query: 236 SSSEESEERD 245
++ + E++D
Sbjct: 256 AAVSKHEQKD 265
Score = 34.7 bits (78), Expect = 0.10
Identities = 65/294 (22%), Positives = 110/294 (37%), Gaps = 47/294 (15%)
Query: 32 KIRELEKQMEDAYRGTKRKMLPSSSS-RMRSDGFDEE------SQRYYWRPKNEISGTLE 84
K + EK +E A K +PS + +++ EE + + + + + T+E
Sbjct: 396 KQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVE 455
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYP-----EEFETDSDQQDITNGK----- 134
+ K KS + + D+ G +E P +E ET D++ GK
Sbjct: 456 QEIRKEKSGKTS-----SILKDKEPIKGKEEKVPASLKEKEPETKKDEKMSKAGKEVKPK 510
Query: 135 ----------KTSPQVKSSTHE--SRKHKKSKKSHKKKQKKRSH-KKQKKSKKEATDITA 181
K PQ+K S K + K+ K +K SH K ++K K+ +T
Sbjct: 511 PPQLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHGKPEEKVLKQVKAVTI 570
Query: 182 DSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEES 241
E+T K + +R+ S K KP +E S + S E
Sbjct: 571 -------EKTAKPKPTKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESK 623
Query: 242 EERDTKKTKRKK----REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 291
E+ D K + +K +E +V E R +K V +++ E +ED
Sbjct: 624 EKADMKHLREEKVSTRKESLQLHNVTKAEKPARVSKDVE-DVPASKKAKEGTED 676
Score = 31.6 bits (70), Expect = 0.86
Identities = 39/185 (21%), Positives = 78/185 (42%), Gaps = 20/185 (10%)
Query: 114 KELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSK 173
K+ E+ + S+++ + +K P S T + ++ + KK +KK + SK
Sbjct: 328 KKKEKEDIKKKSEKETAIDVEKKEPGKASETKQGTVKIAAQAAAKKDEKK------EDSK 381
Query: 174 KEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPA-LFLEAESNTSHSDD 232
K +E + G +K K H KS KK P+ ++A++ + +
Sbjct: 382 K------TKKPAEVEQPKGKKQEKKEK--HVEPAKSPKKEHSVPSDKQVKAKTERAKEEI 433
Query: 233 SASSSSE----ESEERDTKKTKRK-KREKKAHTSVANNEIQERTNKRTNWKVATDERSAE 287
A S + + EE+ TK +++ ++EK TS + + K + E+ E
Sbjct: 434 GAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTSSILKDKEPIKGKEEKVPASLKEKEPE 493
Query: 288 SSEDD 292
+ +D+
Sbjct: 494 TKKDE 498
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 53.1 bits (126), Expect = 3e-07
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 122 ETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITA 181
E +S + + G ++ +S + S K +K + K + RSH + + +K+
Sbjct: 178 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDR----- 232
Query: 182 DSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEES 241
R+ K PHK++ KSR++ + + SHS D + E+
Sbjct: 233 ---------------RRSKSPHKKRSKSRERRKSR---------SRSHSRDKRKDTREKI 268
Query: 242 EERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 291
+E++ + K K REK+ + +ER + K +R + +D
Sbjct: 269 KEKE--RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKD 316
Score = 52.0 bits (123), Expect = 6e-07
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 143 STHESRKHKKSKKSHKKKQKKRS-HKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQ 201
S H SR H +S+ K +++ +S HKK+ KS++ + S + ++T K +
Sbjct: 215 SKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERV 274
Query: 202 PHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTS 261
K ++K R++ ++ E E + D ++ E+D +K K K RE++
Sbjct: 275 KEKDREKEREREKER-----EKEKERGKNKDR-----DKEREKDREKDKEKDREREREKE 324
Query: 262 VANNEIQERTNKRTNWKVATDERSAESSE 290
+ +E+ ++ K +RS E E
Sbjct: 325 HEKDRDKEKEKEQDKEKEREKDRSKEIDE 353
Score = 49.7 bits (117), Expect = 3e-06
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 119 EEFETDSDQQDITNGKKTSPQVKSSTHE-SRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 177
+E E D D++ K + K + E K KK KKS + + ++ + S +E
Sbjct: 323 KEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERR 382
Query: 178 DITADSSSEFSEETGASGTRKGKQ---PHKRKKKSRKKSLKKPALF--LEAESNTSHSDD 232
+ SSS S T + RK + P R KK +K+ ++ + E E +TS
Sbjct: 383 RRRSRSSSR-SPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKS 441
Query: 233 SASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRT 275
S +E E+++ K K+ K+ +SV + E+ ++ RT
Sbjct: 442 SNDRDGKEKLEKNSTSLKEKEHNKEPDSSV-SKEVDDKDAPRT 483
Score = 45.4 bits (106), Expect = 6e-05
Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 13/180 (7%)
Query: 123 TDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQK--------KSKK 174
+ S + ++ + S Q +S K+SK ++K + RSH + K K K+
Sbjct: 213 SQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKE 272
Query: 175 EATDITADSSSEFSEETGASGTR-KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDS 233
+ + E +E R K K K ++K R+K +K + + D
Sbjct: 273 RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKE 332
Query: 234 ASSSSEESEERDTKKTK----RKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESS 289
++ +ER+ ++K ++K++KK+ T + R+ + + RS+ S
Sbjct: 333 KEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRS 392
Score = 44.7 bits (104), Expect = 1e-04
Identities = 55/269 (20%), Positives = 103/269 (38%), Gaps = 36/269 (13%)
Query: 16 RHTDAHNKIQE-----ESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQR 70
+ D KI+E E D K RE EK+ E K K + R +++ +R
Sbjct: 260 KRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRER 319
Query: 71 YYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDI 130
+ E + D K K +K+ + DR KE+ E+ + D +
Sbjct: 320 -----EREKEHEKDRDKEKEKEQDKE----KEREKDR-----SKEI-DEKRKKDKKSRTP 364
Query: 131 TNGKKTSPQVKSSTHESRKHK--------KSKKSHKKKQKKRSHKKQKKSKKEATDITAD 182
S + +SS+ E R+ + ++ K+ K+K + + + K + + D
Sbjct: 365 PRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERD 424
Query: 183 SSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE 242
SE E ++ RK K+K K S + H+ + SS S+E +
Sbjct: 425 HISERRERERSTSMRKSSNDRDGKEKLEKNS--------TSLKEKEHNKEPDSSVSKEVD 476
Query: 243 ERDTKKTKRKKREKKAHTSVANNEIQERT 271
++D +T+ K + + + + +T
Sbjct: 477 DKDAPRTEENKIQHNGNCQLNEENLSTKT 505
Score = 42.4 bits (98), Expect = 5e-04
Identities = 34/181 (18%), Positives = 76/181 (41%), Gaps = 9/181 (4%)
Query: 119 EEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATD 178
+E E + ++ + K + + E + ++ +K H+K + K K+Q K K+ D
Sbjct: 287 KEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKD 346
Query: 179 ITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSS 238
+ + + ++ + + +R + S ++ ++ + TS + SS S
Sbjct: 347 RSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS 406
Query: 239 EESEERDTKKTKRKK--------REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSE 290
R+ K KR+K RE++ TS+ + +R K K +T + E ++
Sbjct: 407 PSPRSRNKKDKKREKERDHISERRERERSTSMRKSS-NDRDGKEKLEKNSTSLKEKEHNK 465
Query: 291 D 291
+
Sbjct: 466 E 466
Score = 37.0 bits (84), Expect = 0.021
Identities = 31/187 (16%), Positives = 69/187 (36%), Gaps = 32/187 (17%)
Query: 105 PDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKR 164
P + HS + P E + +++ K + +S + + + K + +K + R
Sbjct: 134 PLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSR 193
Query: 165 SHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAE 224
SH + K +R + H R+K+S+ K +
Sbjct: 194 SHTRSK-------------------------SRSSSKSHSRRKRSQSKHRSR-------S 221
Query: 225 SNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDER 284
N S S S+ ++ +K +R+K ++H+ + +E+ ++ K E+
Sbjct: 222 HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREK 281
Query: 285 SAESSED 291
E ++
Sbjct: 282 EREREKE 288
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 52.4 bits (124), Expect = 5e-07
Identities = 43/251 (17%), Positives = 109/251 (43%), Gaps = 21/251 (8%)
Query: 25 QEESDMW----KIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEIS 80
++E MW KIRELE++M + + +++ ++R +E + WR + +I
Sbjct: 334 RQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKI- 392
Query: 81 GTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQV 140
+ +K + E M ++ G +E E E + +Q+ +K Q
Sbjct: 393 ----------REQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQE----EKMRRQE 438
Query: 141 KSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGK 200
+ + +K ++ ++ +++++ +++K ++E ++ + EE K +
Sbjct: 439 EKIREQEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIR 498
Query: 201 QPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTK--KTKRKKREKKA 258
+ K+ ++ +K ++ + E E ++ E+ +E++ K + + K RE++
Sbjct: 499 EQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMREQEV 558
Query: 259 HTSVANNEIQE 269
++QE
Sbjct: 559 RLRQQEEKMQE 569
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 52.0 bits (123), Expect = 6e-07
Identities = 71/309 (22%), Positives = 124/309 (40%), Gaps = 48/309 (15%)
Query: 18 TDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKN 77
TD +K+ + + E+ K E K K L + + + DG + ++++ K+
Sbjct: 880 TDGVDKLSGKEQSFTSLEVRKVAETK---EKSKHLKTKTCKKVQDGLSDIAEKFL--KKD 934
Query: 78 EISGTLEDDFLKAKSWN---KKFYDYEAN---MPDRW-GHSGYKELYPEEFETDSDQQDI 130
+ T EDD ++K KK D++ M ++ S E PE E + I
Sbjct: 935 QSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPKGI 994
Query: 131 -------TNGKKTSPQVKSSTH--------------------ESRKHKKSKKSHKKKQKK 163
T+G+K S +++ T +S + KKSK ++KK
Sbjct: 995 KQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSEDKKSKNGAYGREKK 1054
Query: 164 RSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEA 223
R K S+K ++D+ +E G + + K KR + +++L E
Sbjct: 1055 RCKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRL---KRIELRERRNLSSKRNTKEI 1111
Query: 224 ESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDE 283
+S +S SD +EES E + KK +R +KKA RT+ + T
Sbjct: 1112 QSGSSSSD------AEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSS 1165
Query: 284 RSAESSEDD 292
S++ +DD
Sbjct: 1166 SSSDIEDDD 1174
Score = 42.7 bits (99), Expect = 4e-04
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 33/196 (16%)
Query: 122 ETDSDQQDITNGKKTSPQVKS----STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 177
E+DSD ++ + ++ S ES + KK+K K+ K R+ +K E +
Sbjct: 1285 ESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDS 1344
Query: 178 DITADSSSEF---SEETGASGTRKGKQP--------HKRKKKSRK-------KSLKKPAL 219
D SE SE+ TR K+ +K+KKK R+ S K
Sbjct: 1345 DFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNS 1404
Query: 220 FLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREK--------KAHTSVANNEIQERT 271
E E ++ EE +E D K+ K R+K K T N +E
Sbjct: 1405 EEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEE 1464
Query: 272 NKRTNWKVATDERSAE 287
++ ++A ER E
Sbjct: 1465 RRK---RIAERERERE 1477
Score = 42.0 bits (97), Expect = 6e-04
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 123 TDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKS---------HKKKQKKRS--HKKQKK 171
+D+D +I KT +K+ + K K+ +KS K K K S KK+++
Sbjct: 712 SDTDINEIHTNHKTLYDLKTQAGKDDKGKRKRKSSTSGSDFDTKKGKSAKSSIISKKKRQ 771
Query: 172 SKKEATDITADSSSEFS--EETGASGTRKGKQPH-KRKKKSRKKSLKKPALFLEAESNTS 228
++ E+++ ++ E + GA+ T K + P+ K S + K + + N
Sbjct: 772 TQSESSNYDSELEKEIKSMSKIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLK 831
Query: 229 HSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATD 282
S + +S +E +ER+T + +K T++ E+++R K+ +TD
Sbjct: 832 TSQEGSSDDAERKQERETFSSAEGTVDK--DTTIM--ELRDRLPKKQQASASTD 881
Score = 41.6 bits (96), Expect = 8e-04
Identities = 50/227 (22%), Positives = 86/227 (37%), Gaps = 26/227 (11%)
Query: 19 DAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNE 78
+A N++ ESD E K+ +R + K+ S DG E ++ + E
Sbjct: 1277 EAKNQVNSESD--SDSEESKKPRYRHRLLRHKLTVS-------DGESGEEKKTKPKEHKE 1327
Query: 79 ISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSP 138
+ G N++ E + + SG E E E++ +Q+ T K +
Sbjct: 1328 VKGR-----------NRRKVSSEDSEDSDFQESGVSE---EVSESEDEQRPRTRSAKKAE 1373
Query: 139 QVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRK 198
++ S K KK ++ K ++ S K ++E + E EE
Sbjct: 1374 LEENQ--RSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDD 1431
Query: 199 GKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERD 245
K P K +KK R K LK L E ++ ++ +E ER+
Sbjct: 1432 SKSPGKGRKKIR-KILKDDKLRTETQNALKEEEERRKRIAERERERE 1477
Score = 39.7 bits (91), Expect = 0.003
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 133 GKKTSPQVKSSTHESRKH--KKSKKSHKKKQKKRSHKKQKK---SKKEATDITADSSSEF 187
GK + + S+ ++ K+ K+ + K+ KR ++++ SK+ +I + SSS
Sbjct: 1060 GKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGSSSSD 1119
Query: 188 SEETGASGTRKGKQPHKRKK---------KSRKKSLKKPALFLEAESNTSHSDDSASSSS 238
+EE+ +K ++ +KK S + S K+ + + S++ DD +S
Sbjct: 1120 AEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIG 1179
Query: 239 EESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDE 283
E S + K + +HT + E +K V D+
Sbjct: 1180 EGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDD 1224
Score = 39.3 bits (90), Expect = 0.004
Identities = 62/308 (20%), Positives = 116/308 (37%), Gaps = 42/308 (13%)
Query: 26 EESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEIS-GTLE 84
E++ K R K+ + KR L +S+ R ++D S +N I G+ +
Sbjct: 1125 EDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSD 1184
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNG---KKTSPQVK 141
+ +K + N + G + P + D D D N K ++K
Sbjct: 1185 EQKIKPVTENLVLSSHTGFCQSS-GDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIK 1243
Query: 142 ---SSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEET------- 191
SS + + ++ K+ K+ + K + +DS SE S++
Sbjct: 1244 ANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLL 1303
Query: 192 --------GASGTRKGKQPHKRKK---KSRKKSLKKPAL---FLEA--ESNTSHSDD--- 232
G SG K +P + K+ ++R+K + + F E+ S S+D
Sbjct: 1304 RHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQR 1363
Query: 233 ----SASSSSEESEERDTKKTKRKKR----EKKAHTSVANNEIQERTNKRTNWKVATDER 284
SA + E +R K+ K+++R E + + +N+E +E + + +E
Sbjct: 1364 PRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEE 1423
Query: 285 SAESSEDD 292
E DD
Sbjct: 1424 EEEDENDD 1431
Score = 38.9 bits (89), Expect = 0.005
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 37/189 (19%)
Query: 119 EEFETDSDQQDITNGKK---TSPQVK--SSTHESRKHKKSKKSHKKKQKKRSHKKQKKSK 173
++ +D D +GK+ TS +V+ + T E KH K+K KK Q S +K K
Sbjct: 874 QQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTC-KKVQDGLSDIAEKFLK 932
Query: 174 KEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDS 233
K+ +D T++ + S++ GT + K+P KKK ++ E S D
Sbjct: 933 KDQSDETSEDDKKQSKK----GTEEKKKPSDFKKK-----------VIKMEQQYESSSDG 977
Query: 234 ASSSSEESE-----------ERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATD 282
E E + T ++K ++ + TS +E+ + K T
Sbjct: 978 TEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTG-----K 1032
Query: 283 ERSAESSED 291
S +SSED
Sbjct: 1033 GDSCDSSED 1041
Score = 35.4 bits (80), Expect = 0.060
Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 30/199 (15%)
Query: 110 HSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKS--HKKKQKKRSHK 167
H+ +K LY + +T + + D K+ S S +++K K +K S KKK++ +S
Sbjct: 720 HTNHKTLY--DLKTQAGKDDKGKRKRKS-STSGSDFDTKKGKSAKSSIISKKKRQTQSES 776
Query: 168 KQKKSKKE-------------ATDITADSSSEFSEETGASGTRKG--KQPHKRKKKSRKK 212
S+ E T ++ +F ++KG Q HK K S++
Sbjct: 777 SNYDSELEKEIKSMSKIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLKTSQEG 836
Query: 213 SLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK-RKKREKKAHTSVANNEIQERT 271
S ++ + SS+E + ++DT + R + KK S + + + + +
Sbjct: 837 S---------SDDAERKQERETFSSAEGTVDKDTTIMELRDRLPKKQQASASTDGVDKLS 887
Query: 272 NKRTNWKVATDERSAESSE 290
K ++ + AE+ E
Sbjct: 888 GKEQSFTSLEVRKVAETKE 906
Score = 28.9 bits (63), Expect = 5.6
Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 16/168 (9%)
Query: 12 RNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRY 71
R V + QE ++ E E + R K+ L EE+QR
Sbjct: 1334 RKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAEL-------------EENQRS 1380
Query: 72 YWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDIT 131
Y + K +++D + S NK + E + +E EE E D +
Sbjct: 1381 YKQKKKRRRIKVQED---SSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGK 1437
Query: 132 NGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 179
KK +K + K+ +++++ +++++ +E +I
Sbjct: 1438 GRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEI 1485
Score = 28.5 bits (62), Expect = 7.3
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 229 HSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAES 288
+S + +SSSE+S+ + ++KRK S+ ++ K + + ++ S E+
Sbjct: 59 NSKEEGTSSSEKSKSSGSSRSKRK-------PSIVTKYVESDDEKPLDDETVNEDASNEN 111
Query: 289 SEDD 292
SE+D
Sbjct: 112 SEND 115
Score = 28.1 bits (61), Expect = 9.5
Identities = 29/150 (19%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 119 EEFETDSDQQDITNGK--------KTSPQVKSSTHESRKHKKSKKSHKKKQKKRS---HK 167
++F++ D++ G KTS + S E ++ +++ S + K +
Sbjct: 807 KDFDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETFSSAEGTVDKDTTIMEL 866
Query: 168 KQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNT 227
+ + KK+ + D + S + + + + ++ + K+KS+ K + S+
Sbjct: 867 RDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTCKKVQDGLSDI 926
Query: 228 SHSDDSASSSSEESEERDTKKTKRKKREKK 257
+ S E SE+ D K++K+ EKK
Sbjct: 927 AEKFLKKDQSDETSED-DKKQSKKGTEEKK 955
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 52.0 bits (123), Expect = 6e-07
Identities = 71/309 (22%), Positives = 124/309 (40%), Gaps = 48/309 (15%)
Query: 18 TDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKN 77
TD +K+ + + E+ K E K K L + + + DG + ++++ K+
Sbjct: 918 TDGVDKLSGKEQSFTSLEVRKVAETK---EKSKHLKTKTCKKVQDGLSDIAEKFL--KKD 972
Query: 78 EISGTLEDDFLKAKSWN---KKFYDYEAN---MPDRW-GHSGYKELYPEEFETDSDQQDI 130
+ T EDD ++K KK D++ M ++ S E PE E + I
Sbjct: 973 QSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPKGI 1032
Query: 131 -------TNGKKTSPQVKSSTH--------------------ESRKHKKSKKSHKKKQKK 163
T+G+K S +++ T +S + KKSK ++KK
Sbjct: 1033 KQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSEDKKSKNGAYGREKK 1092
Query: 164 RSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEA 223
R K S+K ++D+ +E G + + K KR + +++L E
Sbjct: 1093 RCKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRL---KRIELRERRNLSSKRNTKEI 1149
Query: 224 ESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDE 283
+S +S SD +EES E + KK +R +KKA RT+ + T
Sbjct: 1150 QSGSSSSD------AEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSS 1203
Query: 284 RSAESSEDD 292
S++ +DD
Sbjct: 1204 SSSDIEDDD 1212
Score = 42.7 bits (99), Expect = 4e-04
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 33/196 (16%)
Query: 122 ETDSDQQDITNGKKTSPQVKS----STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 177
E+DSD ++ + ++ S ES + KK+K K+ K R+ +K E +
Sbjct: 1323 ESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDS 1382
Query: 178 DITADSSSEF---SEETGASGTRKGKQP--------HKRKKKSRK-------KSLKKPAL 219
D SE SE+ TR K+ +K+KKK R+ S K
Sbjct: 1383 DFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNS 1442
Query: 220 FLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREK--------KAHTSVANNEIQERT 271
E E ++ EE +E D K+ K R+K K T N +E
Sbjct: 1443 EEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEE 1502
Query: 272 NKRTNWKVATDERSAE 287
++ ++A ER E
Sbjct: 1503 RRK---RIAERERERE 1515
Score = 42.0 bits (97), Expect = 6e-04
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 123 TDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKS---------HKKKQKKRS--HKKQKK 171
+D+D +I KT +K+ + K K+ +KS K K K S KK+++
Sbjct: 750 SDTDINEIHTNHKTLYDLKTQAGKDDKGKRKRKSSTSGSDFDTKKGKSAKSSIISKKKRQ 809
Query: 172 SKKEATDITADSSSEFS--EETGASGTRKGKQPH-KRKKKSRKKSLKKPALFLEAESNTS 228
++ E+++ ++ E + GA+ T K + P+ K S + K + + N
Sbjct: 810 TQSESSNYDSELEKEIKSMSKIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLK 869
Query: 229 HSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATD 282
S + +S +E +ER+T + +K T++ E+++R K+ +TD
Sbjct: 870 TSQEGSSDDAERKQERETFSSAEGTVDK--DTTIM--ELRDRLPKKQQASASTD 919
Score = 41.6 bits (96), Expect = 8e-04
Identities = 50/227 (22%), Positives = 86/227 (37%), Gaps = 26/227 (11%)
Query: 19 DAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNE 78
+A N++ ESD E K+ +R + K+ S DG E ++ + E
Sbjct: 1315 EAKNQVNSESD--SDSEESKKPRYRHRLLRHKLTVS-------DGESGEEKKTKPKEHKE 1365
Query: 79 ISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSP 138
+ G N++ E + + SG E E E++ +Q+ T K +
Sbjct: 1366 VKGR-----------NRRKVSSEDSEDSDFQESGVSE---EVSESEDEQRPRTRSAKKAE 1411
Query: 139 QVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRK 198
++ S K KK ++ K ++ S K ++E + E EE
Sbjct: 1412 LEENQ--RSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDD 1469
Query: 199 GKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERD 245
K P K +KK R K LK L E ++ ++ +E ER+
Sbjct: 1470 SKSPGKGRKKIR-KILKDDKLRTETQNALKEEEERRKRIAERERERE 1515
Score = 39.7 bits (91), Expect = 0.003
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 133 GKKTSPQVKSSTHESRKH--KKSKKSHKKKQKKRSHKKQKK---SKKEATDITADSSSEF 187
GK + + S+ ++ K+ K+ + K+ KR ++++ SK+ +I + SSS
Sbjct: 1098 GKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGSSSSD 1157
Query: 188 SEETGASGTRKGKQPHKRKK---------KSRKKSLKKPALFLEAESNTSHSDDSASSSS 238
+EE+ +K ++ +KK S + S K+ + + S++ DD +S
Sbjct: 1158 AEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIG 1217
Query: 239 EESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDE 283
E S + K + +HT + E +K V D+
Sbjct: 1218 EGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDD 1262
Score = 39.3 bits (90), Expect = 0.004
Identities = 62/308 (20%), Positives = 116/308 (37%), Gaps = 42/308 (13%)
Query: 26 EESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEIS-GTLE 84
E++ K R K+ + KR L +S+ R ++D S +N I G+ +
Sbjct: 1163 EDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSD 1222
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNG---KKTSPQVK 141
+ +K + N + G + P + D D D N K ++K
Sbjct: 1223 EQKIKPVTENLVLSSHTGFCQSS-GDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIK 1281
Query: 142 ---SSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEET------- 191
SS + + ++ K+ K+ + K + +DS SE S++
Sbjct: 1282 ANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLL 1341
Query: 192 --------GASGTRKGKQPHKRKK---KSRKKSLKKPAL---FLEA--ESNTSHSDD--- 232
G SG K +P + K+ ++R+K + + F E+ S S+D
Sbjct: 1342 RHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQR 1401
Query: 233 ----SASSSSEESEERDTKKTKRKKR----EKKAHTSVANNEIQERTNKRTNWKVATDER 284
SA + E +R K+ K+++R E + + +N+E +E + + +E
Sbjct: 1402 PRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEE 1461
Query: 285 SAESSEDD 292
E DD
Sbjct: 1462 EEEDENDD 1469
Score = 38.9 bits (89), Expect = 0.005
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 37/189 (19%)
Query: 119 EEFETDSDQQDITNGKK---TSPQVK--SSTHESRKHKKSKKSHKKKQKKRSHKKQKKSK 173
++ +D D +GK+ TS +V+ + T E KH K+K KK Q S +K K
Sbjct: 912 QQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTC-KKVQDGLSDIAEKFLK 970
Query: 174 KEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDS 233
K+ +D T++ + S++ GT + K+P KKK ++ E S D
Sbjct: 971 KDQSDETSEDDKKQSKK----GTEEKKKPSDFKKK-----------VIKMEQQYESSSDG 1015
Query: 234 ASSSSEESE-----------ERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATD 282
E E + T ++K ++ + TS +E+ + K T
Sbjct: 1016 TEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTG-----K 1070
Query: 283 ERSAESSED 291
S +SSED
Sbjct: 1071 GDSCDSSED 1079
Score = 35.4 bits (80), Expect = 0.060
Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 30/199 (15%)
Query: 110 HSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKS--HKKKQKKRSHK 167
H+ +K LY + +T + + D K+ S S +++K K +K S KKK++ +S
Sbjct: 758 HTNHKTLY--DLKTQAGKDDKGKRKRKS-STSGSDFDTKKGKSAKSSIISKKKRQTQSES 814
Query: 168 KQKKSKKE-------------ATDITADSSSEFSEETGASGTRKG--KQPHKRKKKSRKK 212
S+ E T ++ +F ++KG Q HK K S++
Sbjct: 815 SNYDSELEKEIKSMSKIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLKTSQEG 874
Query: 213 SLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK-RKKREKKAHTSVANNEIQERT 271
S ++ + SS+E + ++DT + R + KK S + + + + +
Sbjct: 875 S---------SDDAERKQERETFSSAEGTVDKDTTIMELRDRLPKKQQASASTDGVDKLS 925
Query: 272 NKRTNWKVATDERSAESSE 290
K ++ + AE+ E
Sbjct: 926 GKEQSFTSLEVRKVAETKE 944
Score = 28.9 bits (63), Expect = 5.6
Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 16/168 (9%)
Query: 12 RNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRY 71
R V + QE ++ E E + R K+ L EE+QR
Sbjct: 1372 RKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAEL-------------EENQRS 1418
Query: 72 YWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDIT 131
Y + K +++D + S NK + E + +E EE E D +
Sbjct: 1419 YKQKKKRRRIKVQED---SSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGK 1475
Query: 132 NGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 179
KK +K + K+ +++++ +++++ +E +I
Sbjct: 1476 GRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEI 1523
Score = 28.5 bits (62), Expect = 7.3
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 229 HSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAES 288
+S + +SSSE+S+ + ++KRK S+ ++ K + + ++ S E+
Sbjct: 59 NSKEEGTSSSEKSKSSGSSRSKRK-------PSIVTKYVESDDEKPLDDETVNEDASNEN 111
Query: 289 SEDD 292
SE+D
Sbjct: 112 SEND 115
Score = 28.1 bits (61), Expect = 9.5
Identities = 29/150 (19%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 119 EEFETDSDQQDITNGK--------KTSPQVKSSTHESRKHKKSKKSHKKKQKKRS---HK 167
++F++ D++ G KTS + S E ++ +++ S + K +
Sbjct: 845 KDFDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETFSSAEGTVDKDTTIMEL 904
Query: 168 KQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNT 227
+ + KK+ + D + S + + + + ++ + K+KS+ K + S+
Sbjct: 905 RDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTCKKVQDGLSDI 964
Query: 228 SHSDDSASSSSEESEERDTKKTKRKKREKK 257
+ S E SE+ D K++K+ EKK
Sbjct: 965 AEKFLKKDQSDETSED-DKKQSKKGTEEKK 993
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 51.6 bits (122), Expect = 8e-07
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 102 ANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQ 161
++MP+R S +E +++E +D T+ K + + + +K S +S K+
Sbjct: 1773 SSMPERASESSSEE--KDDYEIFVKVKD-THEKSKKNKNRDKGEKEKKRDSSLRSRSKRS 1829
Query: 162 KKRSHKKQKK---SKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSR-KKSLKKP 217
K HK +K+ S+ A ++ S S S+ S +R+ ++ + + KSR ++S+ K
Sbjct: 1830 KSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKE 1889
Query: 218 ALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK-----REKKAHTSVANNEIQERTN 272
+ + + H S + S RD +KT R + R ++HT +
Sbjct: 1890 ----KRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTP-SRRRRSRSVG 1944
Query: 273 KRTNWKVATDERSAESS 289
+R ++ ++ RS S
Sbjct: 1945 RRRSFSISPSRRSRTPS 1961
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 135 KTSPQVKSSTHESRKHK--KSKKSHKKKQKKRSHKKQKKSKKEAT--------DITADSS 184
+T P + T +S+KHK K+KK KKK+K++ +K+Q + + T D+ +DS
Sbjct: 96 QTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTKSHDDGNIDLESDSF 155
Query: 185 SEFSEETGA 193
+F E A
Sbjct: 156 LKFDSEPSA 164
Score = 37.4 bits (85), Expect = 0.016
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
Query: 77 NEISGTLEDD---FLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNG 133
+E S +DD F+K K ++K + ++ G KE + ++ ++
Sbjct: 1780 SESSSEEKDDYEIFVKVKDTHEK------SKKNKNRDKGEKEKKRDSSLRSRSKRSKSSE 1833
Query: 134 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 193
K+ + S +RK KSH+ + + RS ++++ + + S E+
Sbjct: 1834 HKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKR 1893
Query: 194 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK 253
S + K +++K+S + +K + A S T S S S R ++ R++
Sbjct: 1894 SPKHRSKSRERKRKRSSSRDNRKT---VRARSRT---PSRRSRSHTPSRRRRSRSVGRRR 1947
Score = 33.1 bits (74), Expect = 0.30
Identities = 19/127 (14%), Positives = 54/127 (42%)
Query: 147 SRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRK 206
SR + ++S K+++KRS K + KS++ ++ + + + + + H
Sbjct: 1876 SRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPS 1935
Query: 207 KKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNE 266
++ R +S+ + F + S S + S + +++++ R + + +
Sbjct: 1936 RRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTP 1995
Query: 267 IQERTNK 273
+ R ++
Sbjct: 1996 SRRRRSR 2002
Score = 28.1 bits (61), Expect = 9.5
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 168 KQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFL----EA 223
K+ K + D + E T+K K+ K K K +KK +K + E+
Sbjct: 84 KEGSRKSRCVSVQTDPTDEIP-------TKKSKKHKKHKNKKKKKKKEKEKKYKRQPEES 136
Query: 224 ESNTSHSDD 232
ES T DD
Sbjct: 137 ESKTKSHDD 145
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 51.6 bits (122), Expect = 8e-07
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 102 ANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQ 161
++MP+R S +E +++E +D T+ K + + + +K S +S K+
Sbjct: 1773 SSMPERASESSSEE--KDDYEIFVKVKD-THEKSKKNKNRDKGEKEKKRDSSLRSRSKRS 1829
Query: 162 KKRSHKKQKK---SKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSR-KKSLKKP 217
K HK +K+ S+ A ++ S S S+ S +R+ ++ + + KSR ++S+ K
Sbjct: 1830 KSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKE 1889
Query: 218 ALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK-----REKKAHTSVANNEIQERTN 272
+ + + H S + S RD +KT R + R ++HT +
Sbjct: 1890 ----KRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTP-SRRRRSRSVG 1944
Query: 273 KRTNWKVATDERSAESS 289
+R ++ ++ RS S
Sbjct: 1945 RRRSFSISPSRRSRTPS 1961
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 135 KTSPQVKSSTHESRKHK--KSKKSHKKKQKKRSHKKQKKSKKEAT--------DITADSS 184
+T P + T +S+KHK K+KK KKK+K++ +K+Q + + T D+ +DS
Sbjct: 96 QTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTKSHDDGNIDLESDSF 155
Query: 185 SEFSEETGA 193
+F E A
Sbjct: 156 LKFDSEPSA 164
Score = 37.4 bits (85), Expect = 0.016
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
Query: 77 NEISGTLEDD---FLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNG 133
+E S +DD F+K K ++K + ++ G KE + ++ ++
Sbjct: 1780 SESSSEEKDDYEIFVKVKDTHEK------SKKNKNRDKGEKEKKRDSSLRSRSKRSKSSE 1833
Query: 134 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 193
K+ + S +RK KSH+ + + RS ++++ + + S E+
Sbjct: 1834 HKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKR 1893
Query: 194 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK 253
S + K +++K+S + +K + A S T S S S R ++ R++
Sbjct: 1894 SPKHRSKSRERKRKRSSSRDNRKT---VRARSRT---PSRRSRSHTPSRRRRSRSVGRRR 1947
Score = 33.1 bits (74), Expect = 0.30
Identities = 19/127 (14%), Positives = 54/127 (42%)
Query: 147 SRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRK 206
SR + ++S K+++KRS K + KS++ ++ + + + + + H
Sbjct: 1876 SRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPS 1935
Query: 207 KKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNE 266
++ R +S+ + F + S S + S + +++++ R + + +
Sbjct: 1936 RRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTP 1995
Query: 267 IQERTNK 273
+ R ++
Sbjct: 1996 SRRRRSR 2002
Score = 28.1 bits (61), Expect = 9.5
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 168 KQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFL----EA 223
K+ K + D + E T+K K+ K K K +KK +K + E+
Sbjct: 84 KEGSRKSRCVSVQTDPTDEIP-------TKKSKKHKKHKNKKKKKKKEKEKKYKRQPEES 136
Query: 224 ESNTSHSDD 232
ES T DD
Sbjct: 137 ESKTKSHDD 145
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 51.2 bits (121), Expect = 1e-06
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 118 PEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKR--SHKKQKKSKKE 175
P+E E D D ++ S +++ H SR ++S++ +K KK+ ++++S++
Sbjct: 1126 PDESEEDPPSNDDSDTDFCSRRLRR--HPSRPMRQSRRLRRKTPKKKYSDDDEEEESEEN 1183
Query: 176 ATDITADSSSEFSEETGASGTRKGKQPHKR--------KKKSRKKSLKKPALFLEAES-- 225
+ D +D S +FS++ + R+ ++ KR + +KSL++
Sbjct: 1184 SRDSESDFSDDFSDDFVETRRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRR 1243
Query: 226 -NTSHSDDSASSSSEESEE--RDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATD 282
++S S++S S + E +E +++K++ RK+ S A+ E +E K + ++
Sbjct: 1244 LSSSESEESYLSKNSEDDELAKESKRSVRKRGRSTDEYSEADEEEEEEEGKPSRKRLHRI 1303
Query: 283 ERSAESSEDD 292
E E S D+
Sbjct: 1304 ETDEEESCDN 1313
Score = 43.1 bits (100), Expect = 3e-04
Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 43/235 (18%)
Query: 34 RELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSW 93
R L + R ++R + + D +EES+ +++ S DDF++ +
Sbjct: 1146 RRLRRHPSRPMRQSRRLRRKTPKKKYSDDDEEEESEENSRDSESDFSDDFSDDFVETRRR 1205
Query: 94 NKKFYDYEANMPDRWGHSGYKEL-YPEEFETDSDQQDITNGKKTSPQVK-----SSTHES 147
+ + +++ Y E+ E+D Q+ + GK+ K S + ES
Sbjct: 1206 RSR-------------RNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEES 1252
Query: 148 RKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKK 207
K S+ K+ KRS +K+ +S TD +++ E EE G
Sbjct: 1253 YLSKNSEDDELAKESKRSVRKRGRS----TDEYSEADEEEEEEEG--------------- 1293
Query: 208 KSRKKSLKKPALFLEAESNTSHSDDSASSSSEE-----SEERDTKKTKRKKREKK 257
K +K L + E + +H D + + + SE+ TKK R + +++
Sbjct: 1294 KPSRKRLHRIETDEEESCDNAHGDANQPARDSQPRVLPSEQESTKKPYRIESDEE 1348
Score = 37.0 bits (84), Expect = 0.021
Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 17/177 (9%)
Query: 115 ELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKK 174
+L PEE T S+ +IT+ ++ + SRK K + + + K +K+ +K
Sbjct: 709 KLVPEEETTASENTEITSERQKEGIKLTIRISSRKKKPDSPPKVLEPENKQEKTEKEEEK 768
Query: 175 EATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSA 234
T S S T + ++ K++ + + +E ES D
Sbjct: 769 TNVGRTLRRSPRISRPTAKVAEIRDQKADKKRGEGEDE--------VEEESTALQKTDKK 820
Query: 235 SSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 291
+ ++ ++K +K K + K T + R WK ++++ S S +
Sbjct: 821 EILKKSEKDTNSKVSKVKPKGKVRWTG---------SRTRGRWKYSSNDESEGSGSE 868
Score = 36.6 bits (83), Expect = 0.027
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 124 DSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADS 183
+S QQD N + SP + E + KK +++ K++++K S K KS+++ D+ S
Sbjct: 216 NSSQQD--NSSRESPSL-----EDEETKKEEETPKQEEQKESEKM--KSEEQPMDLENRS 266
Query: 184 SSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEE 243
++ EET K++K+ K+ +K P + + + + +S +
Sbjct: 267 TANVLEETTV----------KKEKEDEKELVKLPVIVKLEKPLPENEEKKIIKEESDSFK 316
Query: 244 RDTKKTKRKKREKKA 258
+ K K + +E +A
Sbjct: 317 ENVKPIKVEVKECRA 331
Score = 30.4 bits (67), Expect = 1.9
Identities = 42/194 (21%), Positives = 63/194 (32%), Gaps = 45/194 (23%)
Query: 143 STHESRKHKKSKKSHKKKQKKRSHKKQK------------------KSKKEATDITADSS 184
S + K K SKKS ++RS + +K KEA
Sbjct: 990 SEDQEEKKKDSKKSKANLLERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGVGRG 1049
Query: 185 SEFSEETGASGT----------RKGKQPHK-----RKKKSRKKSLKKPALFLEAESNTSH 229
+ S TG G ++ K+P + RKK+ R L + E ES
Sbjct: 1050 KDISTITGHRGKDISTILDEERKENKRPQRAAAARRKKRRRLNDLDSDSNLDEEESEDEF 1109
Query: 230 ------------SDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNW 277
SD++ S E+ D T R + H S + + K
Sbjct: 1110 KISDGSQDEFVVSDENPDESEEDPPSNDDSDTDFCSRRLRRHPSRPMRQSRRLRRKTPKK 1169
Query: 278 KVATDERSAESSED 291
K + D+ ES E+
Sbjct: 1170 KYSDDDEEEESEEN 1183
Score = 28.5 bits (62), Expect = 7.3
Identities = 31/134 (23%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 119 EEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATD 178
E+ E + ++ ++ + SP++ SR K + +K K+ + + + ++E+T
Sbjct: 760 EKTEKEEEKTNVGRTLRRSPRI------SRPTAKVAEIRDQKADKKRGEGEDEVEEESTA 813
Query: 179 ITADSSSEF---SEETGASGTRKGKQPHK-RKKKSRKKSLKKPALFLEAESNTSHSDDSA 234
+ E SE+ S K K K R SR + K + E+E + S + +
Sbjct: 814 LQKTDKKEILKKSEKDTNSKVSKVKPKGKVRWTGSRTRGRWKYSSNDESEGSGS---EKS 870
Query: 235 SSSSEESEERDTKK 248
S++SEE EE+++++
Sbjct: 871 SAASEEEEEKESEE 884
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 51.2 bits (121), Expect = 1e-06
Identities = 62/289 (21%), Positives = 124/289 (42%), Gaps = 30/289 (10%)
Query: 23 KIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQR----YYWRPKNE 78
++Q+E + E EK+ ++ R + + + R + +E QR + W P+ E
Sbjct: 1175 ELQQEEEQLLREEQEKRRQERERQYREE--EELQRQKRKQRYRDEDQRSDLKWQWEPEKE 1232
Query: 79 ISGTLEDDFLKAKSWNKKFYDYE-ANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTS 137
+ + K + N++F E + + DR + L E+ E D +Q+ ++
Sbjct: 1233 NAVRDNKVYCKGRE-NEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDR 1291
Query: 138 --PQVKSSTHESRKHKK--SKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 193
P+ + E +K K +KS ++KQ R +++K+ ++E + +F EE
Sbjct: 1292 HFPEEEQLEREEQKEAKRRDRKSQEEKQLLREEREEKRRRQE-------TDRKFREEEQL 1344
Query: 194 SGTRKGKQPHKRKKKSRK------KSLKKPALFLEAESNTSHSDDSASSSSEESEER--D 245
R+ +QP +R+++ RK + ++ FLE E + EE + R +
Sbjct: 1345 LQERE-EQPLRRQERDRKFREEELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQE 1403
Query: 246 TKKTKRKKREKKAHTSVANNEIQERTNK--RTNWKVATDERSAESSEDD 292
++ R+ R++K QER K +V ER + E++
Sbjct: 1404 REQQLRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERERKFLEEE 1452
Score = 38.5 bits (88), Expect = 0.007
Identities = 44/256 (17%), Positives = 104/256 (40%), Gaps = 26/256 (10%)
Query: 23 KIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGT 82
+++ E + + ++L ++ E+ K + R E+ +R W + E +
Sbjct: 412 QLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKR-----EQEERRDWLKREEETER 466
Query: 83 LEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKS 142
E + + K K+ D E +RW L EE E Q+ + Q++
Sbjct: 467 HEQE--RRKQQLKR--DQEEERRERW-------LKLEEEERREQQE------RREQQLRR 509
Query: 143 STHESRKH--KKSKKSHKKKQKKRSHKKQKKSKKEATD--ITADSSSEFSEETGASGTRK 198
E R+ K+ ++ + +Q+ RS ++ ++ ++E + + + +E ++
Sbjct: 510 EQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKR 569
Query: 199 GKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKA 258
++ + + R++ ++ L E E E EER ++ KR++ E++
Sbjct: 570 EQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEER 629
Query: 259 HTSVANNEIQERTNKR 274
+ +E QE ++
Sbjct: 630 RQQLLKSEEQEERRQQ 645
Score = 37.7 bits (86), Expect = 0.012
Identities = 37/244 (15%), Positives = 96/244 (39%), Gaps = 23/244 (9%)
Query: 19 DAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNE 78
+ ++ + K + E+Q+ RG +R+ R E ++ R + +
Sbjct: 1519 EEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQERD 1578
Query: 79 ISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDS------DQQDITN 132
LE+ ++ + +KF + E + + G ++ +F D ++Q +
Sbjct: 1579 RKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHR 1638
Query: 133 GKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETG 192
++ ++ R+ ++ + H + +K R ++ + +E + +F EE
Sbjct: 1639 QERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQLRRQERDRKFREE-- 1696
Query: 193 ASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRK 252
+Q +R+++ RK FL+ E + EE ++T++ + +
Sbjct: 1697 -------EQQLRRQERERK--------FLQEEQQLRRQELERKFREEEQLRQETEQEQLR 1741
Query: 253 KREK 256
++E+
Sbjct: 1742 RQER 1745
Score = 37.0 bits (84), Expect = 0.021
Identities = 47/288 (16%), Positives = 110/288 (38%), Gaps = 52/288 (18%)
Query: 26 EESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLED 85
EE ++ + E+Q E + +R+ R++ + EE +R R K E +
Sbjct: 626 EEERRQQLLKSEEQEERRQQQLRREQQERREQRLKRE---EEEERLEQRLKREHEEERRE 682
Query: 86 DFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTH 145
L + + ++ +P K + E E D+ Q + + + +
Sbjct: 683 QELAEEEQEQARERIKSRIP--------KWQWQLESEADARQSKVYSRPRKQEGQRRRQE 734
Query: 146 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGT--------- 196
+ K ++ + + ++++R+H++Q++ +++ D T +E E G
Sbjct: 735 QEEKRRRRESELQWQEEERAHRQQQE-EEQRRDFTWQWQAEEKSERGRQRLSARPPLREQ 793
Query: 197 --------------------RKGKQPHKRKKKSRKKSL-----------KKPALFLEAES 225
+ K+ +R+++ R+K L ++ A L+ E
Sbjct: 794 RERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEEE 853
Query: 226 NTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNK 273
+ D S E+ ++ + ++R+++ HT A +QE+ K
Sbjct: 854 DGLQEDQERRRSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLRK 901
Score = 36.2 bits (82), Expect = 0.035
Identities = 47/297 (15%), Positives = 114/297 (38%), Gaps = 23/297 (7%)
Query: 16 RHT-DAHNKIQEE--SDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYY 72
RHT A +QE+ + ++E E++++ R +R+ R EE Q
Sbjct: 886 RHTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLR 945
Query: 73 WRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITN 132
+ E + K K +K P++ ++ Y EE E +++ +
Sbjct: 946 EEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLR 1005
Query: 133 GKKTSPQVKSSTHESRKHKKSKKSH----KKKQKKRSHKKQKKSKKEATDITADSSSEFS 188
++ + + + RK + ++ +++++KR +++++ +E ++ +
Sbjct: 1006 EEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLG 1065
Query: 189 EETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEES------- 241
EE TR+ ++ ++ +K + ++ L E + EE
Sbjct: 1066 EERE---TRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQ 1122
Query: 242 ------EERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
E+R ++ +R+ RE++ ++E KR ++ R E + +
Sbjct: 1123 LLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQE 1179
Score = 35.4 bits (80), Expect = 0.060
Identities = 34/244 (13%), Positives = 91/244 (37%), Gaps = 15/244 (6%)
Query: 58 RMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELY 117
R R D +E + WR + + E+ + + ++ E + +EL
Sbjct: 231 RERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLER---QELR 287
Query: 118 PEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 177
E E + QQ + ++ + + E ++ ++ ++ +++Q++R ++ ++ ++E
Sbjct: 288 RERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERR 347
Query: 178 DITADSSSEFS-----------EETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESN 226
+ E EE R+ +Q + ++ R++ L++ L E
Sbjct: 348 EQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQ-LRREQQ 406
Query: 227 TSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSA 286
E++ ++ + ++ E+K ++ +R +W +E
Sbjct: 407 LRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETER 466
Query: 287 ESSE 290
E
Sbjct: 467 HEQE 470
Score = 35.0 bits (79), Expect = 0.078
Identities = 39/234 (16%), Positives = 96/234 (41%), Gaps = 23/234 (9%)
Query: 25 QEESDMWKIRELEKQMEDAYRGTKRK---------MLPSSSSRMRSDGFDEESQRYYWRP 75
+E + RE EK++E R + K +L R + E+ +R R
Sbjct: 543 EERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRL 602
Query: 76 KNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGK- 134
K E LE + + + ++ + E ++L E + + QQ + +
Sbjct: 603 KREEVERLEQEERREQRLKREEPEEERR----------QQLLKSEEQEERRQQQLRREQQ 652
Query: 135 -KTSPQVKSSTHESRKHKKSKKSHKKKQKKR--SHKKQKKSKKEATDITADSSSEFSEET 191
+ ++K E R ++ K+ H+++++++ + ++Q+++++ + E
Sbjct: 653 ERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEA 712
Query: 192 GASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERD 245
A ++ +P K++ + R++ ++ E+E + + EE + RD
Sbjct: 713 DARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQEEERAHRQQQEEEQRRD 766
Score = 34.3 bits (77), Expect = 0.13
Identities = 42/276 (15%), Positives = 104/276 (37%), Gaps = 39/276 (14%)
Query: 16 RHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRP 75
R + + EE + + RE +Q+++ G + S R D Q++ W+
Sbjct: 825 REREKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQRRD------QKWRWQL 878
Query: 76 KNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKK 135
+ E + K + + + + +EL EE E Q+ ++
Sbjct: 879 EEERKRRRHTLYAKPALQEQLRKEQQLLQEEE------EELQREEREKRRRQEQ---ERQ 929
Query: 136 TSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASG 195
+ + E + ++ ++ ++++++R ++K KK +++ +
Sbjct: 930 YREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLL--------------- 974
Query: 196 TRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKRE 255
G++P KR+++ R+K + E E + E+ ++ ++ RKK E
Sbjct: 975 ---GEEPEKRRRQEREKK------YREEEELQQEEEQLLREEREKRRRQEWERQYRKKDE 1025
Query: 256 KKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 291
+ E +E+ + + +E + E+
Sbjct: 1026 LQQEEEQLLREEREKRRLQERERQYREEEELQQEEE 1061
Score = 32.3 bits (72), Expect = 0.51
Identities = 31/233 (13%), Positives = 89/233 (38%), Gaps = 17/233 (7%)
Query: 25 QEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLE 84
+EE W+ RE + E+ K+ R R +EE R LE
Sbjct: 240 EEEEKEWRKRETVLRKEE------EKLQEEEPQRQRELQEEEEQLR-----------KLE 282
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSST 144
L+ + ++ + +E ++ E Q+ ++ Q
Sbjct: 283 RQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRRE 342
Query: 145 HESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHK 204
E R+ ++ ++ +++++++ +++++ ++ + + ++ + +Q +
Sbjct: 343 QEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLR 402
Query: 205 RKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKK 257
R+++ R++ + L E + + +ER ++ KR++ E++
Sbjct: 403 REQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERR 455
Score = 29.3 bits (64), Expect = 4.3
Identities = 34/250 (13%), Positives = 96/250 (38%), Gaps = 32/250 (12%)
Query: 25 QEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLE 84
++E D + ++Q+E+ G +R+ R ++G +E+S++ + + E
Sbjct: 114 RQEEDQRRFEPRDRQLEEE-PGQRRRQKRQEQERELAEG-EEQSEKQERLEQRDRQRRDE 171
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSST 144
+ + + + W ++ EE + +Q G +T
Sbjct: 172 ELWRQRQEWQER----------------------EERRAEEEQLQSCKGHETE------- 202
Query: 145 HESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHK 204
E ++ ++ + +++ +++++ ++E D E + RK ++ +
Sbjct: 203 -EFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQ 261
Query: 205 RKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVAN 264
++ R++ L++ L + ++ R ++ +RK+ E++
Sbjct: 262 EEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEER 321
Query: 265 NEIQERTNKR 274
E QER ++
Sbjct: 322 REQQERREQQ 331
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 51.2 bits (121), Expect = 1e-06
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 25/242 (10%)
Query: 34 RELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSW 93
RELE++ E + K R RS E +R R ++ D +
Sbjct: 293 RELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRD-----RKG 347
Query: 94 NKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKS 153
+++ D E + G ++ Y +E + +++ + +++ Q E +KHK+
Sbjct: 348 DRRDRDREREKENERGRRRDRD-YDKERGNEREKERERSRERSKEQRSRGEVEEKKHKED 406
Query: 154 KKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA-SGTRKGKQPHKRKKKSRKK 212
K + + KR KK+KK + + S S G S +R ++ K K +S++K
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEK 466
Query: 213 SLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTN 272
S K+ + S + DS S + +K++++ R K ER++
Sbjct: 467 SNKR------SRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSK------------ERSH 508
Query: 273 KR 274
KR
Sbjct: 509 KR 510
Score = 50.8 bits (120), Expect = 1e-06
Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 23/245 (9%)
Query: 25 QEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRS-DGFDEESQRYYWRPKNEISGTL 83
+ E + + R +++ +E ++ + S SR R D D + +R +NE
Sbjct: 310 EREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDRER---EKENERGRRR 366
Query: 84 EDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKS- 142
+ D+ K + N++ + E + E+ ++ + D D + + K+ S + K
Sbjct: 367 DRDYDKERG-NEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKH 425
Query: 143 --STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTR--- 197
S RKH+ +S ++ RS K+K SK + + S E S + SG++
Sbjct: 426 SRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHK------NESKEKSNKRSRSGSQGRT 479
Query: 198 ------KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKR 251
K ++ K+KSRK+S K S++ D +S E+++++ +
Sbjct: 480 DSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQH 539
Query: 252 KKREK 256
K +++
Sbjct: 540 KNKDE 544
Score = 50.1 bits (118), Expect = 2e-06
Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 141 KSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT-ADSSSEFSEETGASGTRKG 199
K +E K ++ + K+Q+ R ++KK K++ D D + +E S +R
Sbjct: 372 KERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSR 431
Query: 200 KQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAH 259
++ H + +SR ++ K + E ++ H ++S S++ S +T ++ KK
Sbjct: 432 ERKH--RSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKRE 489
Query: 260 TSVANNEIQERTNKRTNWKVATDERSAESSED 291
S + +E++ KR+ K + +R S+D
Sbjct: 490 HSPS----KEKSRKRSRSKERSHKRDHSDSKD 517
Score = 43.9 bits (102), Expect = 2e-04
Identities = 37/173 (21%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 118 PEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 177
P + + DQQ T +K K E +H + ++S ++ + ++S+ +
Sbjct: 222 PVPVQKNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSH 281
Query: 178 DITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKP-ALFLEAESNTSHSDDSASS 236
SS F E K +Q +R+ K R+K ++ ++ E S S + S
Sbjct: 282 HREGHGSSSFDREL---EREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRS 338
Query: 237 SSEESEERDTKKTKRKKREKKAHTSVANNE--IQERTNKRTNWKVATDERSAE 287
S + + ++ + ++REK+ + +ER N+R + + ERS E
Sbjct: 339 RSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKE 391
Score = 32.0 bits (71), Expect = 0.66
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 34 RELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEIS-GTLEDDFLKAKS 92
RE EK+ E RG +R + R + ++E +R R K + S G +E+ K
Sbjct: 354 REREKENE---RGRRRDR---DYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDK 407
Query: 93 WNKKFYDYEANMPDRWGHSGYKELYPEEFETDSDQQDITNGKKTSPQVKSSTHESRKHKK 152
+++ D + + HS + + + S ++ ++ + KSS H++ +K
Sbjct: 408 DDRRHRDDKRDSKKEKKHSRSRSR-ERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEK 466
Query: 153 S-------------------KKSH---KKKQKKRSHKKQKKSKKEATDITADSSSEFSEE 190
S K+ H K+K +KRS K++ K++ +D S
Sbjct: 467 SNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRR 526
Query: 191 TGASGTRKGKQPHKRKKKS 209
+ + ++ HK K ++
Sbjct: 527 SQSIEQESQEKQHKNKDET 545
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 204 KRKKKSRKKSLKKPALFLEAESNTSHSDDSASSS----SEESEERDTKKTKRKKREKKAH 259
+R+ +S ++SL + S + H + SSS E +ER + + K+REK+
Sbjct: 257 RRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERR 316
Query: 260 TSVANNEIQERTNKRTNWKVATDERSAESSED 291
S + + ER R+ + + RS + D
Sbjct: 317 RSRSIDRGLERRRSRSRERHRSRSRSRDRKGD 348
>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
Length = 352
Score = 51.2 bits (121), Expect = 1e-06
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 150 HKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKS 209
H S+K + + + R +K+ KK D + + S+ S+ AS ++ K+K +
Sbjct: 126 HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEERSKQKARR 185
Query: 210 RKKSLKKPALFLEAESNTSHSDDSASSSS------EESEERDTKKTKRKKREKKAHTSVA 263
R +S + + S++S S S+SSS + ++R KK KRKK +KK
Sbjct: 186 RTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAE 245
Query: 264 NNEIQ 268
+++
Sbjct: 246 AQQVE 250
Score = 47.4 bits (111), Expect = 2e-05
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 143 STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQP 202
S SR +S+ +K+KK+S K + + +A +S T + KQ
Sbjct: 129 SRKRSRSRSRSRGRGSEKRKKKSRKDTSR------NCSASTSQGRKASTAPGAEERSKQK 182
Query: 203 HKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKK 257
+R+ +S S + S++S S S+SSSS+ ++R K KR+K++KK
Sbjct: 183 ARRRTRSSSSSSSS-----SSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKK 232
Score = 44.7 bits (104), Expect = 1e-04
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 125 SDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKK-KQKKRSHKKQKKSKKEATDITADS 183
S+++ + K TS +ST + RK + + ++ KQK R + S ++ ++ S
Sbjct: 144 SEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEERSKQKARRRTRSSSSSSSSSSSSSSS 203
Query: 184 SSEFSEETGASGTRK-GKQPHKRKKK-----SRKKSLKKPALFLEAESNTSHSDDSASSS 237
SS S + + G +K GK KR+KK KK K+ A + E+ S D S
Sbjct: 204 SSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQWHRS 263
Query: 238 SEESEERDTKKTKRKKR 254
+ E E+ ++K R
Sbjct: 264 AGEEEDGPVLTDEQKSR 280
Score = 38.1 bits (87), Expect = 0.009
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 123 TDSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITAD 182
+ S ++ +S SS ++ K K KKK+K++ KK+ K K EA + A
Sbjct: 193 SSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEAL 252
Query: 183 SSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE 242
+ ++G + ++KSR +++K T D+ S +
Sbjct: 253 PGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMK---------PMTKEEWDARQSIIRKVV 303
Query: 243 ERDTKKTKRKKREKKAHTSVANNEIQERTNKR 274
+ +T +T+ K + + + E NK+
Sbjct: 304 DPETGRTRLIKGDGEVLEEIVTKERHREINKQ 335
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.302 0.118 0.322
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,964,861
Number of Sequences: 37866
Number of extensions: 508867
Number of successful extensions: 12424
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 708
Number of HSP's that attempted gapping in prelim test: 4308
Number of HSP's gapped (non-prelim): 4598
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.