Guide to the Human Genome
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Name: RUFY2 Sequence: fasta or formatted (403aa) NCBI GI: 109240552
Description:

RUN and FYVE domain-containing 2 isoform b

Referenced in:

Additional Interaction Domain Families
Zinc Finger Proteins

Other entries for this name:
alt prot [641aa] RUN and FYVE domain-containing 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         23           2
 C cysteine            0.7          3           1
 D aspartate           5.7         23           1
 E glutamate          11.4         46           3
 F phenylalanine       1.7          7           2
 G glycine             4.0         16           1
 H histidine           2.2          9           1
 I isoleucine          6.2         25           2
 K lysine              8.2         33           1
 L leucine            13.2         53           2
 M methionine          3.2         13           2
 N asparagine          5.7         23           2
 P proline             1.5          6           2
 Q glutamine           6.5         26           2
 R arginine            4.2         17           2
 S serine              6.2         25           2
 T threonine           4.2         17           1
 V valine              6.5         26           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RUN and FYVE domain-containing 2 isoform b 
RUFY2                 0.882   RUN and FYVE domain-containing 2 isoform a 
RUFY1                 0.545   RUN and FYVE domain-containing 1 isoform a 
RUFY1                 0.545   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.545   RUN and FYVE domain-containing 1 isoform b 
RUFY3                 0.538   RUN and FYVE domain containing 3 isoform 2 
RUFY3                 0.523   RUN and FYVE domain containing 3 isoform 1 
RUFY3                 0.523   RUN and FYVE domain containing 3 isoform 3 
RUNDC3B               0.085   RUN domain containing 3B isoform b 
RUNDC3B               0.076   RUN domain containing 3B isoform c 
RUNDC3B               0.076   RUN domain containing 3B isoform a 
RUNDC3A               0.058   RUN domain containing 3A isoform 3 
RUNDC3A               0.056   RUN domain containing 3A isoform 1 
RUNDC3A               0.056   RUN domain containing 3A isoform 2 
CENPE                 0.053   centromere protein E 
DSP                   0.045   desmoplakin isoform I 
CGN                   0.042   cingulin 
MYH1                  0.042   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH10                 0.041   myosin, heavy polypeptide 10, non-muscle 
MYH13                 0.041   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH9                  0.040   myosin, heavy polypeptide 9, non-muscle 
CCDC41                0.040   NY-REN-58 antigen 
CCDC41                0.040   NY-REN-58 antigen 
CUX1                  0.040   cut-like homeobox 1 isoform a 
CUX1                  0.040   cut-like homeobox 1 isoform b 
GOLGA1                0.038   golgin 97 
LOC283685             0.037   PREDICTED: golgi autoantigen, golgin subfamily a-li...
PPFIA1                0.037   PTPRF interacting protein alpha 1 isoform a 
PPFIA1                0.037   PTPRF interacting protein alpha 1 isoform b 
CEP110                0.037   centrosomal protein 110kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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