RUNDC3B 11406

Name: RUNDC3B	Sequence: fasta or formatted (456aa)		NCBI GI: 197304744
Description: RUN domain containing 3B isoform b		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [407aa] RUN domain containing 3B isoform c alt prot [473aa] RUN domain containing 3B isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 24 2 C cysteine 1.8 8 1 D aspartate 5.3 24 2 E glutamate 7.9 36 3 F phenylalanine 2.9 13 1 G glycine 7.0 32 7 H histidine 1.1 5 1 I isoleucine 4.4 20 2 K lysine 5.7 26 2 L leucine 12.5 57 2 M methionine 1.8 8 1 N asparagine 4.6 21 2 P proline 3.1 14 2 Q glutamine 4.8 22 1 R arginine 5.5 25 2 S serine 12.3 56 3 T threonine 5.3 24 2 V valine 4.4 20 1 W tryptophan 1.3 6 1 Y tyrosine 3.3 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RUN domain containing 3B isoform b RUNDC3B 0.987 RUN domain containing 3B isoform a RUNDC3B 0.859 RUN domain containing 3B isoform c RUNDC3A 0.476 RUN domain containing 3A isoform 1 RUNDC3A 0.433 RUN domain containing 3A isoform 3 RUNDC3A 0.426 RUN domain containing 3A isoform 2 RUFY3 0.112 RUN and FYVE domain containing 3 isoform 3 RUFY2 0.107 RUN and FYVE domain-containing 2 isoform a RUFY3 0.106 RUN and FYVE domain containing 3 isoform 2 RUFY3 0.106 RUN and FYVE domain containing 3 isoform 1 RUFY1 0.100 RUN and FYVE domain-containing 1 isoform a RUFY1 0.091 RUN and FYVE domain-containing 1 isoform b RUFY1 0.091 RUN and FYVE domain-containing 1 isoform b RUFY2 0.073 RUN and FYVE domain-containing 2 isoform b RUNDC2A 0.042 RUN domain containing 2A PLEKHM2 0.025 pleckstrin homology domain containing, family M (wi... DENND5B 0.025 DENN/MADD domain containing 5B DENND5A 0.023 RAB6 interacting protein 1 PLEKHM1 0.019 pleckstrin homology domain containing, family M (wit... UACA 0.015 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.015 uveal autoantigen with coiled-coil domains and ankyr... FHAD1 0.014 forkhead-associated (FHA) phosphopeptide binding do... CCDC88A 0.014 coiled-coil domain containing 88A isoform 2 CCDC88A 0.014 coiled-coil domain containing 88A isoform 1 SARS 0.013 seryl-tRNA synthetase CGNL1 0.011 cingulin-like 1 DMD 0.011 dystrophin Dp427c isoform DMD 0.011 dystrophin Dp260-2 isoform DMD 0.011 dystrophin Dp260-1 isoform DMD 0.011 dystrophin Dp427p2 isoform Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.