RUNDC3B 11609

Name: RUNDC3B	Sequence: fasta or formatted (473aa)		NCBI GI: 19923090
Description: RUN domain containing 3B isoform a		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [456aa] RUN domain containing 3B isoform b alt prot [407aa] RUN domain containing 3B isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 25 2 C cysteine 1.9 9 1 D aspartate 5.1 24 2 E glutamate 7.8 37 3 F phenylalanine 2.7 13 1 G glycine 6.8 32 7 H histidine 1.3 6 1 I isoleucine 4.7 22 2 K lysine 5.5 26 2 L leucine 12.7 60 2 M methionine 1.7 8 1 N asparagine 4.4 21 2 P proline 3.2 15 2 Q glutamine 5.3 25 1 R arginine 5.5 26 2 S serine 12.3 58 3 T threonine 5.1 24 2 V valine 4.2 20 1 W tryptophan 1.5 7 1 Y tyrosine 3.2 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RUN domain containing 3B isoform a RUNDC3B 0.949 RUN domain containing 3B isoform b RUNDC3B 0.813 RUN domain containing 3B isoform c RUNDC3A 0.454 RUN domain containing 3A isoform 1 RUNDC3A 0.405 RUN domain containing 3A isoform 2 RUNDC3A 0.404 RUN domain containing 3A isoform 3 RUFY3 0.095 RUN and FYVE domain containing 3 isoform 3 RUFY2 0.091 RUN and FYVE domain-containing 2 isoform a RUFY3 0.090 RUN and FYVE domain containing 3 isoform 2 RUFY3 0.090 RUN and FYVE domain containing 3 isoform 1 RUFY1 0.085 RUN and FYVE domain-containing 1 isoform a RUFY1 0.078 RUN and FYVE domain-containing 1 isoform b RUFY1 0.078 RUN and FYVE domain-containing 1 isoform b RUFY2 0.062 RUN and FYVE domain-containing 2 isoform b RUNDC2A 0.043 RUN domain containing 2A DENND5B 0.024 DENN/MADD domain containing 5B DENND5A 0.022 RAB6 interacting protein 1 PLEKHM1 0.019 pleckstrin homology domain containing, family M (wit... PLEKHM2 0.018 pleckstrin homology domain containing, family M (wi... UACA 0.014 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.014 uveal autoantigen with coiled-coil domains and ankyr... FHAD1 0.013 forkhead-associated (FHA) phosphopeptide binding do... CCDC88A 0.013 coiled-coil domain containing 88A isoform 2 CCDC88A 0.013 coiled-coil domain containing 88A isoform 1 SARS 0.012 seryl-tRNA synthetase CGNL1 0.011 cingulin-like 1 DMD 0.011 dystrophin Dp427c isoform DMD 0.011 dystrophin Dp260-2 isoform DMD 0.011 dystrophin Dp260-1 isoform DMD 0.011 dystrophin Dp427p2 isoform Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.