GPHN 333

Name: GPHN	Sequence: fasta or formatted (769aa)		NCBI GI: 10880983
Description: gephyrin isoform 1		Referenced in: GABA and Glycine Pteridines and Molybdopterin
Other entries for this name: alt prot [736aa] gephyrin isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 52 3 C cysteine 1.6 12 1 D aspartate 6.4 49 2 E glutamate 6.8 52 6 F phenylalanine 2.0 15 1 G glycine 7.4 57 2 H histidine 2.7 21 2 I isoleucine 7.0 54 2 K lysine 4.6 35 2 L leucine 9.1 70 2 M methionine 3.0 23 1 N asparagine 2.9 22 1 P proline 7.9 61 4 Q glutamine 3.4 26 1 R arginine 5.3 41 2 S serine 7.0 54 4 T threonine 6.8 52 2 V valine 7.8 60 2 W tryptophan 0.4 3 1 Y tyrosine 1.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gephyrin isoform 1 GPHN 0.942 gephyrin isoform 2 NAT12 0.009 N-acetyltransferase 12 JMY 0.008 junction-mediating and regulatory protein FNBP4 0.008 formin binding protein 4 CHTF18 0.008 CTF18, chromosome transmission fidelity factor 18 ho... HOXA10 0.007 homeobox A10 isoform a SRRM2 0.007 splicing coactivator subunit SRm300 LRRC46 0.007 leucine rich repeat containing 46 C13orf23 0.007 hypothetical protein LOC80209 isoform 2 C13orf23 0.007 hypothetical protein LOC80209 isoform 1 LOC100292845 0.007 PREDICTED: hypothetical protein MUC12 0.007 PREDICTED: mucin 12 LOC100289230 0.007 PREDICTED: hypothetical protein XP_002342600 MUC12 0.007 PREDICTED: mucin 12, cell surface associated COBL 0.007 cordon-bleu homolog SCAF1 0.006 SR-related CTD-associated factor 1 PHC3 0.006 polyhomeotic like 3 ARHGEF17 0.006 Rho guanine nucleotide exchange factor (GEF) 17 [Hom... FAM59A 0.006 hypothetical protein LOC64762 NEDD4L 0.006 neural precursor cell expressed, developmentally dow... NEDD4L 0.006 neural precursor cell expressed, developmentally do... NEDD4L 0.006 neural precursor cell expressed, developmentally do... NEDD4L 0.006 neural precursor cell expressed, developmentally do... LOC100133142 0.006 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.006 PREDICTED: similar to zinc finger protein 208 [Homo... MUC3A 0.006 PREDICTED: mucin 3A, intestinal LOC732156 0.006 PREDICTED: similar to Mucin-3A RBM16 0.006 RNA-binding motif protein 16 NACA 0.006 nascent polypeptide-associated complex alpha subuni... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.