Guide to the Human Genome
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Name: GNAQ Sequence: fasta or formatted (359aa) NCBI GI: 40254462
Description:

guanine nucleotide binding protein (G protein), q polypeptide

Referenced in:

G Proteins
Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         21           2
 C cysteine            1.4          5           2
 D aspartate           7.8         28           1
 E glutamate           8.1         29           2
 F phenylalanine       4.7         17           1
 G glycine             3.1         11           2
 H histidine           1.7          6           1
 I isoleucine          7.0         25           2
 K lysine              6.1         22           2
 L leucine             9.2         33           4
 M methionine          3.1         11           1
 N asparagine          4.2         15           1
 P proline             3.1         11           1
 Q glutamine           4.5         16           2
 R arginine            7.5         27           3
 S serine              5.8         21           2
 T threonine           4.7         17           2
 V valine              6.4         23           1
 W tryptophan          0.8          3           1
 Y tyrosine            5.0         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein (G protein), q po... 
GNA11                 0.912   guanine nucleotide binding protein (G protein), alp...
GNA14                 0.823   G alpha 14 
GNA15                 0.540   guanine nucleotide binding protein (G protein), alp...
GNAI1                 0.464   guanine nucleotide binding protein (G protein), alph...
GNAO1                 0.460   guanine nucleotide binding protein, alpha activatin...
GNAI3                 0.455   guanine nucleotide binding protein (G protein), alpha...
GNAI2                 0.454   guanine nucleotide binding protein (G protein), alpha...
GNAO1                 0.447   guanine nucleotide binding protein, alpha activating...
GNAT3                 0.444   guanine nucleotide binding protein, alpha transduci...
GNAT2                 0.444   guanine nucleotide binding protein, alpha transducin...
GNAT1                 0.435   rod-type transducin alpha subunit 
GNAT1                 0.435   rod-type transducin alpha subunit 
GNA13                 0.422   guanine nucleotide binding protein (G protein), alph...
GNAZ                  0.408   guanine nucleotide binding protein, alpha z polypepti...
GNA12                 0.401   guanine nucleotide binding protein (G protein) alpha...
GNAL                  0.363   guanine nucleotide binding protein (G protein), alph...
GNAL                  0.353   guanine nucleotide binding protein (G protein), alpha...
GNAL                  0.353   guanine nucleotide binding protein (G protein), alp...
GNAS                  0.352   GNAS complex locus isoform g 
GNAS                  0.347   GNAS complex locus GNASS 
GNAS                  0.340   GNAS complex locus GNASL 
GNAS                  0.339   GNAS complex locus isoform f 
GNAS                  0.321   GNAS complex locus XLas 
ARF5                  0.030   ADP-ribosylation factor 5 
ARF4                  0.029   ADP-ribosylation factor 4 
ARF1                  0.029   ADP-ribosylation factor 1 
ARF1                  0.029   ADP-ribosylation factor 1 
ARF1                  0.029   ADP-ribosylation factor 1 
ARF1                  0.029   ADP-ribosylation factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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