Search of human proteins with 4557647

Search of human proteins with 4557647

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4557647 heat shock factor binding protein 1 [Homo sapiens]
         (76 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4557647 heat shock factor binding protein 1 [Homo sapiens]         147   1e-36
gi|239753880 PREDICTED: similar to heat shock factor binding pro...   125   1e-29
gi|239748439 PREDICTED: hypothetical protein XP_002346659 [Homo ...   125   1e-29
gi|239742375 PREDICTED: hypothetical protein XP_002342506 [Homo ...   125   1e-29
gi|209969760 heat shock factor binding protein 1-like [Homo sapi...    51   2e-07
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s...    29   0.93 
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa...    29   0.93 
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof...    29   0.93 
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof...    29   0.93 
gi|157694505 LINE-1 type transposase domain containing 1 [Homo s...    29   0.93 
gi|215599324 coiled-coil domain containing 114 isoform 2 [Homo s...    29   0.93 
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     28   1.6  
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     27   2.7  
gi|4501929 class I alcohol dehydrogenase, alpha subunit [Homo sa...    27   3.5  
gi|34577061 class I alcohol dehydrogenase, beta subunit [Homo sa...    27   3.5  
gi|4501933 class I alcohol dehydrogenase, gamma subunit [Homo sa...    27   3.5  
gi|21735548 centrosomal protein 2 [Homo sapiens]                       27   3.5  
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H...    27   3.5  
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom...    27   3.5  
gi|109659849 filamin A interacting protein 1-like isoform 2 [Hom...    27   3.5  
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom...    27   3.5  
gi|33598924 scavenger receptor class A, member 3 isoform 1 [Homo...    27   3.5  
gi|33598922 scavenger receptor class A, member 3 isoform 2 [Homo...    27   3.5  
gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo sa...    27   4.6  
gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo sa...    27   4.6  
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo...    27   4.6  
gi|221316624 dystonin isoform 4 [Homo sapiens]                         27   4.6  
gi|221316622 dystonin isoform 3 [Homo sapiens]                         27   4.6  
gi|221316618 dystonin isoform 2 [Homo sapiens]                         27   4.6  
gi|34577047 dystonin isoform 1 [Homo sapiens]                          27   4.6  

>gi|4557647 heat shock factor binding protein 1 [Homo sapiens]
          Length = 76

 Score =  147 bits (372), Expect = 1e-36
 Identities = 76/76 (100%), Positives = 76/76 (100%)

Query: 1  MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
          MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG
Sbjct: 1  MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60

Query: 61 VEELESENKIPATQKS 76
          VEELESENKIPATQKS
Sbjct: 61 VEELESENKIPATQKS 76


>gi|239753880 PREDICTED: similar to heat shock factor binding
          protein 1 [Homo sapiens]
          Length = 88

 Score =  125 bits (313), Expect = 1e-29
 Identities = 64/75 (85%), Positives = 69/75 (92%)

Query: 1  MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
          +AETDPK  Q+LTSVVQ LLQQ+QDKFQTMSDQIIGR DDMSS  DDLEKNIADLMTQAG
Sbjct: 6  IAETDPKNEQELTSVVQKLLQQIQDKFQTMSDQIIGRTDDMSSCTDDLEKNIADLMTQAG 65

Query: 61 VEELESENKIPATQK 75
          VEELES+NKIPATQ+
Sbjct: 66 VEELESKNKIPATQE 80


>gi|239748439 PREDICTED: hypothetical protein XP_002346659 [Homo
          sapiens]
          Length = 88

 Score =  125 bits (313), Expect = 1e-29
 Identities = 64/75 (85%), Positives = 69/75 (92%)

Query: 1  MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
          +AETDPK  Q+LTSVVQ LLQQ+QDKFQTMSDQIIGR DDMSS  DDLEKNIADLMTQAG
Sbjct: 6  IAETDPKNEQELTSVVQKLLQQIQDKFQTMSDQIIGRTDDMSSCTDDLEKNIADLMTQAG 65

Query: 61 VEELESENKIPATQK 75
          VEELES+NKIPATQ+
Sbjct: 66 VEELESKNKIPATQE 80


>gi|239742375 PREDICTED: hypothetical protein XP_002342506 [Homo
          sapiens]
          Length = 88

 Score =  125 bits (313), Expect = 1e-29
 Identities = 64/75 (85%), Positives = 69/75 (92%)

Query: 1  MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
          +AETDPK  Q+LTSVVQ LLQQ+QDKFQTMSDQIIGR DDMSS  DDLEKNIADLMTQAG
Sbjct: 6  IAETDPKNEQELTSVVQKLLQQIQDKFQTMSDQIIGRTDDMSSCTDDLEKNIADLMTQAG 65

Query: 61 VEELESENKIPATQK 75
          VEELES+NKIPATQ+
Sbjct: 66 VEELESKNKIPATQE 80


>gi|209969760 heat shock factor binding protein 1-like [Homo
          sapiens]
          Length = 74

 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 22/59 (37%), Positives = 38/59 (64%)

Query: 12 LTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEELESENKI 70
          L    + L Q++Q+ FQ ++  +  R+++M +RI+DL+KN+ DLM QAG+E    E  +
Sbjct: 14 LRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQML 72


>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
            sapiens]
          Length = 3118

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 7    KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQA 59
            +   ++ S++   ++ +Q K   MS+++  +IDD+S  I D  + +A+ ++QA
Sbjct: 1844 RLADEINSIID-YVEDIQTKLPPMSEELNDKIDDLSQEIKD--RKLAEKVSQA 1893


>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
            sapiens]
          Length = 3122

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 7    KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQA 59
            +   ++ S++   ++ +Q K   MS+++  +IDD+S  I D  + +A+ ++QA
Sbjct: 1844 RLADEINSIID-YVEDIQTKLPPMSEELNDKIDDLSQEIKD--RKLAEKVSQA 1893


>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
            [Homo sapiens]
          Length = 6907

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 11/54 (20%), Positives = 31/54 (57%)

Query: 5    DPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQ 58
            D + +++  ++    L +++  + T+    +  ++D +SRID+L +  + ++TQ
Sbjct: 5211 DCQDIENQLAIKSKALDELKQSYLTLESGAVPLLEDTASRIDELFQKRSSVLTQ 5264


>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
            [Homo sapiens]
          Length = 6885

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 11/54 (20%), Positives = 31/54 (57%)

Query: 5    DPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQ 58
            D + +++  ++    L +++  + T+    +  ++D +SRID+L +  + ++TQ
Sbjct: 5211 DCQDIENQLAIKSKALDELKQSYLTLESGAVPLLEDTASRIDELFQKRSSVLTQ 5264


>gi|157694505 LINE-1 type transposase domain containing 1 [Homo
           sapiens]
          Length = 865

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 8/72 (11%)

Query: 2   AETDPKTVQDLTSVVQTLLQQMQDKFQTMSD------QIIGRIDDMSSRIDDLEKNIADL 55
           A+   +T ++L S V   +++++++   +        +I   +DD+SSR+D LE+ I  L
Sbjct: 607 ADLTEETEENLRSSVINSIREIKEEIGNLKSSHSGVLEIENSVDDLSSRMDILEERIDSL 666

Query: 56  MTQAGVEELESE 67
             Q  +EE   +
Sbjct: 667 EDQ--IEEFSKD 676


>gi|215599324 coiled-coil domain containing 114 isoform 2 [Homo
           sapiens]
          Length = 670

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 13/43 (30%), Positives = 26/43 (60%)

Query: 17  QTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQA 59
           Q +LQQ  DK  + ++++  R  D+  +++ L+ +I  L T+A
Sbjct: 343 QKVLQQRMDKVHSEAERLEARFQDVRGQLEKLKADIQLLFTKA 385


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 1    MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQ-A 59
            +AE   K  Q + ++ + LL QM++K +         + ++++++ + E+ +  L  +  
Sbjct: 1637 LAELKRKAEQKIAAIKKQLLSQMEEKEEQYKKGTESHLSELNTKLQEREREVHILEEKLK 1696

Query: 60   GVEELESENKI 70
             VE  +SE  I
Sbjct: 1697 SVESSQSETLI 1707


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 9/55 (16%)

Query: 20   LQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKN-------IADLMTQAGVEELESE 67
            L+++  +F+T  + ++   DD+   + +LEK+       + ++ TQ  +EELE E
Sbjct: 1495 LERLNKQFRTEMEDLMSSKDDVGKSVHELEKSKRALEQQVEEMKTQ--LEELEDE 1547


>gi|4501929 class I alcohol dehydrogenase, alpha subunit [Homo
           sapiens]
          Length = 375

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 10  QDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRI 45
           QD    +Q +L++M D     S ++IGR+D M + +
Sbjct: 245 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASL 280


>gi|34577061 class I alcohol dehydrogenase, beta subunit [Homo
           sapiens]
          Length = 375

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 10  QDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRI 45
           QD    +Q +L++M D     S ++IGR+D M + +
Sbjct: 245 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASL 280


>gi|4501933 class I alcohol dehydrogenase, gamma subunit [Homo
           sapiens]
          Length = 375

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 10  QDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRI 45
           QD    +Q +L++M D     S ++IGR+D M + +
Sbjct: 245 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASL 280


>gi|21735548 centrosomal protein 2 [Homo sapiens]
          Length = 2442

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 14/80 (17%)

Query: 10   QDLTSVVQTLLQQMQDKFQTMS----DQIIGRIDDMSSRID---DLEKNIADLMTQAGVE 62
            Q+ T ++QT LQ+ Q + +  +    D +    ++ SS +    DL+K + DL +Q   +
Sbjct: 963  QETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQ 1022

Query: 63   -------ELESENKIPATQK 75
                   E E + K+  TQ+
Sbjct: 1023 DDSQRLVEQEVQEKLRETQE 1042


>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
            sapiens]
          Length = 1940

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 20   LQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNI-ADLMTQAGVEELESE 67
            LQ   +  QT+  Q   +I ++ +RI++LE+ I A+  T+A  E+  S+
Sbjct: 1091 LQSKVEDEQTLGLQFQKKIKELQARIEELEEEIEAERATRAKTEKQRSD 1139


>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
           sapiens]
          Length = 1133

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 1   MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
           +AE   +  +   + ++  LQ    KF    D I+ ++ +  S+   L++ +A L  Q  
Sbjct: 276 LAEARVQEEEQKATRLEKELQTQTTKFHQDQDTIMAKLTNEDSQNRQLQQKLAALSRQ-- 333

Query: 61  VEELESENK 69
           ++ELE  N+
Sbjct: 334 IDELEETNR 342


>gi|109659849 filamin A interacting protein 1-like isoform 2 [Homo
           sapiens]
          Length = 893

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 1   MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
           +AE   +  +   + ++  LQ    KF    D I+ ++ +  S+   L++ +A L  Q  
Sbjct: 36  LAEARVQEEEQKATRLEKELQTQTTKFHQDQDTIMAKLTNEDSQNRQLQQKLAALSRQ-- 93

Query: 61  VEELESENK 69
           ++ELE  N+
Sbjct: 94  IDELEETNR 102


>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
           sapiens]
          Length = 1135

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 1   MAETDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
           +AE   +  +   + ++  LQ    KF    D I+ ++ +  S+   L++ +A L  Q  
Sbjct: 276 LAEARVQEEEQKATRLEKELQTQTTKFHQDQDTIMAKLTNEDSQNRQLQQKLAALSRQ-- 333

Query: 61  VEELESENK 69
           ++ELE  N+
Sbjct: 334 IDELEETNR 342


>gi|33598924 scavenger receptor class A, member 3 isoform 1 [Homo
           sapiens]
          Length = 606

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 9/61 (14%)

Query: 4   TDPKTVQDLTSVVQTL---LQQMQDKFQTMSD---QIIG---RIDDMSSRIDDLEKNIAD 54
           T  KT + + ++  TL    Q++    ++M D   Q++G   ++D++SS +DD E+N+ D
Sbjct: 268 TSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHD 327

Query: 55  L 55
           L
Sbjct: 328 L 328


>gi|33598922 scavenger receptor class A, member 3 isoform 2 [Homo
           sapiens]
          Length = 466

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 9/61 (14%)

Query: 4   TDPKTVQDLTSVVQTL---LQQMQDKFQTMSD---QIIG---RIDDMSSRIDDLEKNIAD 54
           T  KT + + ++  TL    Q++    ++M D   Q++G   ++D++SS +DD E+N+ D
Sbjct: 268 TSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHD 327

Query: 55  L 55
           L
Sbjct: 328 L 328


>gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo
            sapiens]
          Length = 2316

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 12   LTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEELESE 67
            L    Q   +++Q K   M D+I+ +ID+  + ++   KN+ D      VEE +SE
Sbjct: 1997 LVQSAQNEREKLQIKIDEM-DKILKKIDNCLTEMETETKNLEDEEKNNPVEEWDSE 2051


>gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo
            sapiens]
          Length = 2342

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 12   LTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEELESE 67
            L    Q   +++Q K   M D+I+ +ID+  + ++   KN+ D      VEE +SE
Sbjct: 2023 LVQSAQNEREKLQIKIDEM-DKILKKIDNCLTEMETETKNLEDEEKNNPVEEWDSE 2077


>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
            sapiens]
          Length = 1938

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 3    ETDPKTVQDLTSVVQTLLQQMQDKF---QTMSDQIIGRIDDMSSRIDDLEKNI-ADLMTQ 58
            E D + +++     +  L Q+Q K    Q  S Q   +I ++ +RI++LE+ I A+   +
Sbjct: 1074 ENDKQQIEEKLKKKEFELSQLQAKIDDEQVHSLQFQKKIKELQARIEELEEEIEAEHTLR 1133

Query: 59   AGVEELESE 67
            A +E+  S+
Sbjct: 1134 AKIEKQRSD 1142


>gi|221316624 dystonin isoform 4 [Homo sapiens]
          Length = 5526

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 7    KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNI-----ADLMTQAGV 61
            KT + L     +LL    D  +T+ D I+GR +D+S  +++  + +       L  Q G+
Sbjct: 2051 KTAEVLLDARGSLLPAKNDIQKTLDD-IVGRYEDLSKSVNERNEKLQITLTRSLSVQDGL 2109

Query: 62   EEL 64
            +E+
Sbjct: 2110 DEM 2112


>gi|221316622 dystonin isoform 3 [Homo sapiens]
          Length = 5537

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 7    KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNI-----ADLMTQAGV 61
            KT + L     +LL    D  +T+ D I+GR +D+S  +++  + +       L  Q G+
Sbjct: 2062 KTAEVLLDARGSLLPAKNDIQKTLDD-IVGRYEDLSKSVNERNEKLQITLTRSLSVQDGL 2120

Query: 62   EEL 64
            +E+
Sbjct: 2121 DEM 2123


>gi|221316618 dystonin isoform 2 [Homo sapiens]
          Length = 5675

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 7    KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNI-----ADLMTQAGV 61
            KT + L     +LL    D  +T+ D I+GR +D+S  +++  + +       L  Q G+
Sbjct: 2200 KTAEVLLDARGSLLPAKNDIQKTLDD-IVGRYEDLSKSVNERNEKLQITLTRSLSVQDGL 2258

Query: 62   EEL 64
            +E+
Sbjct: 2259 DEM 2261


>gi|34577047 dystonin isoform 1 [Homo sapiens]
          Length = 5497

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 7    KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNI-----ADLMTQAGV 61
            KT + L     +LL    D  +T+ D I+GR +D+S  +++  + +       L  Q G+
Sbjct: 2022 KTAEVLLDARGSLLPAKNDIQKTLDD-IVGRYEDLSKSVNERNEKLQITLTRSLSVQDGL 2080

Query: 62   EEL 64
            +E+
Sbjct: 2081 DEM 2083


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.308    0.124    0.312 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,124,910
Number of Sequences: 37866
Number of extensions: 60150
Number of successful extensions: 437
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 398
Number of HSP's gapped (non-prelim): 56
length of query: 76
length of database: 18,247,518
effective HSP length: 48
effective length of query: 28
effective length of database: 16,429,950
effective search space: 460038600
effective search space used: 460038600
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.