Guide to the Human Genome
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Search of human proteins with 4557501

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4557501 cathepsin O preproprotein [Homo sapiens]
         (321 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4557501 cathepsin O preproprotein [Homo sapiens]                   675   0.0  
gi|6042196 cathepsin F [Homo sapiens]                                 158   7e-39
gi|23110957 cathepsin H isoform b precursor [Homo sapiens]            147   2e-35
gi|23110955 cathepsin H isoform a preproprotein [Homo sapiens]        147   2e-35
gi|23110962 cathepsin S preproprotein [Homo sapiens]                  141   9e-34
gi|23110960 cathepsin L2 preproprotein [Homo sapiens]                 141   9e-34
gi|22202619 cathepsin L1 preproprotein [Homo sapiens]                 136   3e-32
gi|4503155 cathepsin L1 preproprotein [Homo sapiens]                  136   3e-32
gi|4503151 cathepsin K preproprotein [Homo sapiens]                   129   3e-30
gi|23110964 cathepsin W preproprotein [Homo sapiens]                  128   8e-30
gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens]        96   4e-20
gi|22538442 cathepsin Z preproprotein [Homo sapiens]                   96   4e-20
gi|22538437 cathepsin B preproprotein [Homo sapiens]                   89   4e-18
gi|22538435 cathepsin B preproprotein [Homo sapiens]                   89   4e-18
gi|22538433 cathepsin B preproprotein [Homo sapiens]                   89   4e-18
gi|22538431 cathepsin B preproprotein [Homo sapiens]                   89   4e-18
gi|4503139 cathepsin B preproprotein [Homo sapiens]                    89   4e-18
gi|224586907 tubulointerstitial nephritis antigen [Homo sapiens]       73   3e-13
gi|11545918 tubulointerstitial nephritis antigen-like 1 [Homo sa...    64   2e-10
gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 ...    30   2.2  
gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 K...    30   2.2  
gi|115305569 adenosine A1 receptor [Homo sapiens]                      30   2.9  
gi|4501947 adenosine A1 receptor [Homo sapiens]                        30   2.9  
gi|4505579 furin preproprotein [Homo sapiens]                          29   4.9  
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re...    29   4.9  
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re...    29   4.9  
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r...    29   4.9  
gi|157785649 leucine-rich repeats and IQ motif containing 3 [Hom...    29   6.4  
gi|21389491 family with sequence similarity 82, member A1 [Homo ...    28   8.4  
gi|14861858 hypothetical protein LOC85411 [Homo sapiens]               28   8.4  

>gi|4557501 cathepsin O preproprotein [Homo sapiens]
          Length = 321

 Score =  675 bits (1742), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MDVRALPWLPWLLWLLCRGGGDADSRAPFTPTWPRSREREAAAFRESLNRHRYLNSLFPS 60
           MDVRALPWLPWLLWLLCRGGGDADSRAPFTPTWPRSREREAAAFRESLNRHRYLNSLFPS
Sbjct: 1   MDVRALPWLPWLLWLLCRGGGDADSRAPFTPTWPRSREREAAAFRESLNRHRYLNSLFPS 60

Query: 61  ENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVV 120
           ENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVV
Sbjct: 61  ENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVV 120

Query: 121 TQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALN 180
           TQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALN
Sbjct: 121 TQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALN 180

Query: 181 WLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGP 240
           WLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGP
Sbjct: 181 WLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGP 240

Query: 241 LVVIVDAVSWQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGY 300
           LVVIVDAVSWQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGY
Sbjct: 241 LVVIVDAVSWQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGY 300

Query: 301 AHVKMGSNVCGIADSVSSIFV 321
           AHVKMGSNVCGIADSVSSIFV
Sbjct: 301 AHVKMGSNVCGIADSVSSIFV 321


>gi|6042196 cathepsin F [Homo sapiens]
          Length = 484

 Score =  158 bits (399), Expect = 7e-39
 Identities = 99/299 (33%), Positives = 153/299 (51%), Gaps = 11/299 (3%)

Query: 29  FTPTWPRSRE-REAAAFRESL--NRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYL 85
           F  T+ R+ E +E A +R S+  N       +   +  TA YG+ +FS L  EEF+ IYL
Sbjct: 190 FVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYL 249

Query: 86  RSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAY 145
            +   K P    +   S+ +++ P  +DWR K  VT+V++Q MCG CWAFSV G VE  +
Sbjct: 250 NTLLRKEPGNKMKQAKSVGDLAPP-EWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQW 308

Query: 146 AIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCH 205
            +    L  LS Q+++DC   +  C GG   NA + +  +   L  + +Y ++     C+
Sbjct: 309 FLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLG-GLETEDDYSYQGHMQSCN 367

Query: 206 YFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVSWQDYLGGI---IQHHC 262
            FS   +   I    + + S  E ++A  L   GP+ V ++A   Q Y  GI   ++  C
Sbjct: 368 -FSAEKAKVYIN--DSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLC 424

Query: 263 SSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGIADSVSSIFV 321
           S    +HAVL+ G+      P+W ++NSWG+ WG  GY ++  GS  CG+    SS  V
Sbjct: 425 SPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 483


>gi|23110957 cathepsin H isoform b precursor [Homo sapiens]
          Length = 323

 Score =  147 bits (370), Expect = 2e-35
 Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 20/267 (7%)

Query: 62  NSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDK-QVV 120
           N T    +NQFS +   E K  YL S+P       +           P   DWR K   V
Sbjct: 60  NHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTG--PYPPSVDWRKKGNFV 117

Query: 121 TQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCS--YNNYGCNGGSTLNA 178
           + V+NQ  CG CW FS  GA+ESA AI    +  L+ QQ++DC+  +NN+GC GG    A
Sbjct: 118 SPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQA 177

Query: 179 LNWL--NKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGF--SIKGYSAYDFSDQEDEMAKA 234
             ++  NK    ++ +  YP++ ++G C +  G   GF   +   + YD    E+ M +A
Sbjct: 178 FEYILYNK---GIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYD----EEAMVEA 230

Query: 235 LLTFGPLVVIVDAVS-WQDYLGGIIQH---HCSSGEANHAVLITGFDKTGSTPYWIVRNS 290
           +  + P+    +    +  Y  GI      H +  + NHAVL  G+ +    PYWIV+NS
Sbjct: 231 VALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNS 290

Query: 291 WGSSWGVDGYAHVKMGSNVCGIADSVS 317
           WG  WG++GY  ++ G N+CG+A   S
Sbjct: 291 WGPQWGMNGYFLIERGKNMCGLAACAS 317


>gi|23110955 cathepsin H isoform a preproprotein [Homo sapiens]
          Length = 335

 Score =  147 bits (370), Expect = 2e-35
 Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 20/267 (7%)

Query: 62  NSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDK-QVV 120
           N T    +NQFS +   E K  YL S+P       +           P   DWR K   V
Sbjct: 72  NHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTG--PYPPSVDWRKKGNFV 129

Query: 121 TQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCS--YNNYGCNGGSTLNA 178
           + V+NQ  CG CW FS  GA+ESA AI    +  L+ QQ++DC+  +NN+GC GG    A
Sbjct: 130 SPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQA 189

Query: 179 LNWL--NKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGF--SIKGYSAYDFSDQEDEMAKA 234
             ++  NK    ++ +  YP++ ++G C +  G   GF   +   + YD    E+ M +A
Sbjct: 190 FEYILYNK---GIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYD----EEAMVEA 242

Query: 235 LLTFGPLVVIVDAVS-WQDYLGGIIQH---HCSSGEANHAVLITGFDKTGSTPYWIVRNS 290
           +  + P+    +    +  Y  GI      H +  + NHAVL  G+ +    PYWIV+NS
Sbjct: 243 VALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNS 302

Query: 291 WGSSWGVDGYAHVKMGSNVCGIADSVS 317
           WG  WG++GY  ++ G N+CG+A   S
Sbjct: 303 WGPQWGMNGYFLIERGKNMCGLAACAS 329


>gi|23110962 cathepsin S preproprotein [Homo sapiens]
          Length = 331

 Score =  141 bits (355), Expect = 9e-34
 Identities = 90/255 (35%), Positives = 133/255 (52%), Gaps = 16/255 (6%)

Query: 68  GINQFSYLFPEEFKAIYLRSK-PSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQ 126
           G+N    +  EE  ++    + PS++ R     + S PN  LP   DWR+K  VT+V+ Q
Sbjct: 76  GMNHLGDMTSEEVMSLMSSLRVPSQWQRNIT--YKSNPNRILPDSVDWREKGCVTEVKYQ 133

Query: 127 QMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCS---YNNYGCNGGSTLNALNWL- 182
             CG CWAFS VGA+E+   +K   L  LS Q ++DCS   Y N GCNGG    A  ++ 
Sbjct: 134 GSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYII 193

Query: 183 -NKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPL 241
            NK    +  D+ YP+KA +  C Y S  +   +   Y+   +  +ED + +A+   GP+
Sbjct: 194 DNK---GIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYG-REDVLKEAVANKGPV 248

Query: 242 VVIVDA--VSWQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDG 299
            V VDA   S+  Y  G+      +   NH VL+ G+       YW+V+NSWG ++G +G
Sbjct: 249 SVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEG 308

Query: 300 YAHV-KMGSNVCGIA 313
           Y  + +   N CGIA
Sbjct: 309 YIRMARNKGNHCGIA 323


>gi|23110960 cathepsin L2 preproprotein [Homo sapiens]
          Length = 334

 Score =  141 bits (355), Expect = 9e-34
 Identities = 93/263 (35%), Positives = 134/263 (50%), Gaps = 23/263 (8%)

Query: 69  INQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQM 128
           +N F  +  EEF+ +    +  KF +   +V      + LP   DWR K  VT V+NQ+ 
Sbjct: 77  MNAFGDMTNEEFRQMMGCFRNQKFRK--GKVFREPLFLDLPKSVDWRKKGYVTPVKNQKQ 134

Query: 129 CGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCS--YNNYGCNGGSTLNALNWLNKMQ 186
           CG CWAFS  GA+E     K   L  LS Q ++DCS    N GCNGG    A  ++ K  
Sbjct: 135 CGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYV-KEN 193

Query: 187 VKLVKDSEYPFKAQNGLCHY----FSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLV 242
             L  +  YP+ A + +C Y       + +GF++          +E  + KA+ T GP+ 
Sbjct: 194 GGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVA------PGKEKALMKAVATVGPIS 247

Query: 243 VIVDA--VSWQDYLGGI-IQHHCSSGEANHAVLITGFDKTG----STPYWIVRNSWGSSW 295
           V +DA   S+Q Y  GI  +  CSS   +H VL+ G+   G    ++ YW+V+NSWG  W
Sbjct: 248 VAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEW 307

Query: 296 GVDGYAHV-KMGSNVCGIADSVS 317
           G +GY  + K  +N CGIA + S
Sbjct: 308 GSNGYVKIAKDKNNHCGIATAAS 330


>gi|22202619 cathepsin L1 preproprotein [Homo sapiens]
          Length = 333

 Score =  136 bits (342), Expect = 3e-32
 Identities = 90/263 (34%), Positives = 130/263 (49%), Gaps = 24/263 (9%)

Query: 69  INQFSYLFPEEFKAI---YLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRN 125
           +N F  +  EEF+ +   +   KP K   +   +    P        DWR+K  VT V+N
Sbjct: 77  MNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPR-----SVDWREKGYVTPVKN 131

Query: 126 QQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCS--YNNYGCNGGSTLNALNWLN 183
           Q  CG CWAFS  GA+E     K   L  LS Q ++DCS    N GCNGG    A  ++ 
Sbjct: 132 QGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQ 191

Query: 184 KMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAY-DFSDQEDEMAKALLTFGPLV 242
                L  +  YP++A    C Y    +  +S+   + + D   QE  + KA+ T GP+ 
Sbjct: 192 D-NGGLDSEESYPYEATEESCKY----NPKYSVANDTGFVDIPKQEKALMKAVATVGPIS 246

Query: 243 VIVDA--VSWQDYLGGI-IQHHCSSGEANHAVLITGF----DKTGSTPYWIVRNSWGSSW 295
           V +DA   S+  Y  GI  +  CSS + +H VL+ G+     ++ +  YW+V+NSWG  W
Sbjct: 247 VAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEW 306

Query: 296 GVDGYAHV-KMGSNVCGIADSVS 317
           G+ GY  + K   N CGIA + S
Sbjct: 307 GMGGYVKMAKDRRNHCGIASAAS 329


>gi|4503155 cathepsin L1 preproprotein [Homo sapiens]
          Length = 333

 Score =  136 bits (342), Expect = 3e-32
 Identities = 90/263 (34%), Positives = 130/263 (49%), Gaps = 24/263 (9%)

Query: 69  INQFSYLFPEEFKAI---YLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRN 125
           +N F  +  EEF+ +   +   KP K   +   +    P        DWR+K  VT V+N
Sbjct: 77  MNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPR-----SVDWREKGYVTPVKN 131

Query: 126 QQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCS--YNNYGCNGGSTLNALNWLN 183
           Q  CG CWAFS  GA+E     K   L  LS Q ++DCS    N GCNGG    A  ++ 
Sbjct: 132 QGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQ 191

Query: 184 KMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAY-DFSDQEDEMAKALLTFGPLV 242
                L  +  YP++A    C Y    +  +S+   + + D   QE  + KA+ T GP+ 
Sbjct: 192 D-NGGLDSEESYPYEATEESCKY----NPKYSVANDTGFVDIPKQEKALMKAVATVGPIS 246

Query: 243 VIVDA--VSWQDYLGGI-IQHHCSSGEANHAVLITGF----DKTGSTPYWIVRNSWGSSW 295
           V +DA   S+  Y  GI  +  CSS + +H VL+ G+     ++ +  YW+V+NSWG  W
Sbjct: 247 VAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEW 306

Query: 296 GVDGYAHV-KMGSNVCGIADSVS 317
           G+ GY  + K   N CGIA + S
Sbjct: 307 GMGGYVKMAKDRRNHCGIASAAS 329


>gi|4503151 cathepsin K preproprotein [Homo sapiens]
          Length = 329

 Score =  129 bits (325), Expect = 3e-30
 Identities = 77/213 (36%), Positives = 108/213 (50%), Gaps = 7/213 (3%)

Query: 109 PLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNNY 168
           P   D+R K  VT V+NQ  CG CWAFS VGA+E     K   L +LS Q ++DC   N 
Sbjct: 116 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 175

Query: 169 GCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQE 228
           GC GG   NA  ++ K +  +  +  YP+  Q   C Y + +      +GY        E
Sbjct: 176 GCGGGYMTNAFQYVQKNR-GIDSEDAYPYVGQEESCMY-NPTGKAAKCRGYREIP-EGNE 232

Query: 229 DEMAKALLTFGPLVVIVDA--VSWQDYLGGI-IQHHCSSGEANHAVLITGFDKTGSTPYW 285
             + +A+   GP+ V +DA   S+Q Y  G+     C+S   NHAVL  G+       +W
Sbjct: 233 KALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHW 292

Query: 286 IVRNSWGSSWGVDGY-AHVKMGSNVCGIADSVS 317
           I++NSWG +WG  GY    +  +N CGIA+  S
Sbjct: 293 IIKNSWGENWGNKGYILMARNKNNACGIANLAS 325


>gi|23110964 cathepsin W preproprotein [Homo sapiens]
          Length = 376

 Score =  128 bits (321), Expect = 8e-30
 Identities = 84/278 (30%), Positives = 126/278 (45%), Gaps = 35/278 (12%)

Query: 64  TAFYGINQFSYLFPEEFKAIY-LRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQ-VVT 121
           TA +G+  FS L  EEF  +Y  R      P    E+    P  S+P   DWR     ++
Sbjct: 83  TAEFGVTPFSDLTEEEFGQLYGYRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAIS 142

Query: 122 QVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNA-LN 180
            +++Q+ C  CWA +  G +E+ + I      D+SVQ+++DC     GC+GG   +A + 
Sbjct: 143 PIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFIT 202

Query: 181 WLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDF---SDQEDEMAKALLT 237
            LN   +   KD  +  K +   CH        +        DF    + E  +A+ L T
Sbjct: 203 VLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAW------IQDFIMLQNNEHRIAQYLAT 256

Query: 238 FGPLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGS------------- 281
           +GP+ V ++    Q Y  G+I+     C     +H+VL+ GF    S             
Sbjct: 257 YGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQS 316

Query: 282 -------TPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312
                  TPYWI++NSWG+ WG  GY  +  GSN CGI
Sbjct: 317 QPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGI 354


>gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens]
          Length = 463

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 24/244 (9%)

Query: 86  RSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQ---VVTQVRNQQMCGGCWAFSVVGAVE 142
           R KP+     +AE+   I  + LP  +DWR+      V+ VRNQ  CG C++F+ +G +E
Sbjct: 214 RPKPAPL---TAEIQQKI--LHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLE 268

Query: 143 SAYAI--KGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQ 200
           +   I         LS Q+V+ CS    GC GG     +         LV+++ +P+   
Sbjct: 269 ARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPY-LIAGKYAQDFGLVEEACFPYTGT 327

Query: 201 NGLCHYFSGSHSGFSIKGYSAYDFSDQEDE--MAKALLTFGPLVVIVDAVS-WQDYLGGI 257
           +  C         +S + +    F    +E  M   L+  GP+ V  +    +  Y  GI
Sbjct: 328 DSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGI 387

Query: 258 IQHHCSSGE-------ANHAVLITGF--DKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSN 308
             HH    +        NHAVL+ G+  D      YWIV+NSWG+ WG +GY  ++ G++
Sbjct: 388 Y-HHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTD 446

Query: 309 VCGI 312
            C I
Sbjct: 447 ECAI 450


>gi|22538442 cathepsin Z preproprotein [Homo sapiens]
          Length = 303

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 73/236 (30%), Positives = 104/236 (44%), Gaps = 30/236 (12%)

Query: 90  SKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQV---RNQ---QMCGGCWAFSVVGAVES 143
           S +PR     H  +    LP  +DWR+   V      RNQ   Q CG CWA +   A+  
Sbjct: 48  STYPR----PHEYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMAD 103

Query: 144 AYAIKGK---PLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVK-------LVKDS 193
              IK K   P   LSVQ VIDC  N   C GG+ L+  ++ ++  +          KD 
Sbjct: 104 RINIKRKGAWPSTLLSVQNVIDCG-NAGSCEGGNDLSVWDYAHQHGIPDETCNNYQAKDQ 162

Query: 194 EYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQ-----EDEMAKALLTFGPLVVIVDAV 248
           E     Q G C+ F   H+   I+ Y+ +   D       ++M   +   GP+   + A 
Sbjct: 163 ECDKFNQCGTCNEFKECHA---IRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMAT 219

Query: 249 S-WQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHV 303
               +Y GGI   +  +   NH V + G+  +  T YWIVRNSWG  WG  G+  +
Sbjct: 220 ERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRI 275


>gi|22538437 cathepsin B preproprotein [Homo sapiens]
          Length = 339

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 37/253 (14%)

Query: 101 MSIPNVSLPLRFD----WRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAI--KGKPLED 154
           M   ++ LP  FD    W     + ++R+Q  CG CWAF  V A+     I        +
Sbjct: 73  MFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVE 132

Query: 155 LSVQQVIDC--SYNNYGCNGGSTLNALN-WLNKMQVK--------------------LVK 191
           +S + ++ C  S    GCNGG    A N W  K  V                      V 
Sbjct: 133 VSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVN 192

Query: 192 DSEYPFKAQNG------LCHY-FSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVI 244
            S  P   +        +C   +S ++      GY++Y  S+ E ++   +   GP+   
Sbjct: 193 GSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGA 252

Query: 245 VDAVS-WQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHV 303
               S +  Y  G+ QH        HA+ I G+     TPYW+V NSW + WG +G+  +
Sbjct: 253 FSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKI 312

Query: 304 KMGSNVCGIADSV 316
             G + CGI   V
Sbjct: 313 LRGQDHCGIESEV 325


>gi|22538435 cathepsin B preproprotein [Homo sapiens]
          Length = 339

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 37/253 (14%)

Query: 101 MSIPNVSLPLRFD----WRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAI--KGKPLED 154
           M   ++ LP  FD    W     + ++R+Q  CG CWAF  V A+     I        +
Sbjct: 73  MFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVE 132

Query: 155 LSVQQVIDC--SYNNYGCNGGSTLNALN-WLNKMQVK--------------------LVK 191
           +S + ++ C  S    GCNGG    A N W  K  V                      V 
Sbjct: 133 VSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVN 192

Query: 192 DSEYPFKAQNG------LCHY-FSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVI 244
            S  P   +        +C   +S ++      GY++Y  S+ E ++   +   GP+   
Sbjct: 193 GSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGA 252

Query: 245 VDAVS-WQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHV 303
               S +  Y  G+ QH        HA+ I G+     TPYW+V NSW + WG +G+  +
Sbjct: 253 FSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKI 312

Query: 304 KMGSNVCGIADSV 316
             G + CGI   V
Sbjct: 313 LRGQDHCGIESEV 325


>gi|22538433 cathepsin B preproprotein [Homo sapiens]
          Length = 339

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 37/253 (14%)

Query: 101 MSIPNVSLPLRFD----WRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAI--KGKPLED 154
           M   ++ LP  FD    W     + ++R+Q  CG CWAF  V A+     I        +
Sbjct: 73  MFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVE 132

Query: 155 LSVQQVIDC--SYNNYGCNGGSTLNALN-WLNKMQVK--------------------LVK 191
           +S + ++ C  S    GCNGG    A N W  K  V                      V 
Sbjct: 133 VSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVN 192

Query: 192 DSEYPFKAQNG------LCHY-FSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVI 244
            S  P   +        +C   +S ++      GY++Y  S+ E ++   +   GP+   
Sbjct: 193 GSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGA 252

Query: 245 VDAVS-WQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHV 303
               S +  Y  G+ QH        HA+ I G+     TPYW+V NSW + WG +G+  +
Sbjct: 253 FSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKI 312

Query: 304 KMGSNVCGIADSV 316
             G + CGI   V
Sbjct: 313 LRGQDHCGIESEV 325


>gi|22538431 cathepsin B preproprotein [Homo sapiens]
          Length = 339

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 37/253 (14%)

Query: 101 MSIPNVSLPLRFD----WRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAI--KGKPLED 154
           M   ++ LP  FD    W     + ++R+Q  CG CWAF  V A+     I        +
Sbjct: 73  MFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVE 132

Query: 155 LSVQQVIDC--SYNNYGCNGGSTLNALN-WLNKMQVK--------------------LVK 191
           +S + ++ C  S    GCNGG    A N W  K  V                      V 
Sbjct: 133 VSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVN 192

Query: 192 DSEYPFKAQNG------LCHY-FSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVI 244
            S  P   +        +C   +S ++      GY++Y  S+ E ++   +   GP+   
Sbjct: 193 GSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGA 252

Query: 245 VDAVS-WQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHV 303
               S +  Y  G+ QH        HA+ I G+     TPYW+V NSW + WG +G+  +
Sbjct: 253 FSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKI 312

Query: 304 KMGSNVCGIADSV 316
             G + CGI   V
Sbjct: 313 LRGQDHCGIESEV 325


>gi|4503139 cathepsin B preproprotein [Homo sapiens]
          Length = 339

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 37/253 (14%)

Query: 101 MSIPNVSLPLRFD----WRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAI--KGKPLED 154
           M   ++ LP  FD    W     + ++R+Q  CG CWAF  V A+     I        +
Sbjct: 73  MFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVE 132

Query: 155 LSVQQVIDC--SYNNYGCNGGSTLNALN-WLNKMQVK--------------------LVK 191
           +S + ++ C  S    GCNGG    A N W  K  V                      V 
Sbjct: 133 VSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVN 192

Query: 192 DSEYPFKAQNG------LCHY-FSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVI 244
            S  P   +        +C   +S ++      GY++Y  S+ E ++   +   GP+   
Sbjct: 193 GSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGA 252

Query: 245 VDAVS-WQDYLGGIIQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHV 303
               S +  Y  G+ QH        HA+ I G+     TPYW+V NSW + WG +G+  +
Sbjct: 253 FSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKI 312

Query: 304 KMGSNVCGIADSV 316
             G + CGI   V
Sbjct: 313 LRGQDHCGIESEV 325


>gi|224586907 tubulointerstitial nephritis antigen [Homo sapiens]
          Length = 476

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 67/222 (30%), Positives = 92/222 (41%), Gaps = 40/222 (18%)

Query: 125 NQQMCGGCWAFSVVGAVESAYAI--KGKPLEDLSVQQVIDC-SYNNYGCNGGSTLNALNW 181
           +Q+ C   WAFS         AI  KG+   +LS Q +I C + N +GCN GS   A  +
Sbjct: 236 DQKNCAASWAFSTASVAADRIAIQSKGRYTANLSPQNLISCCAKNRHGCNSGSIDRAWWY 295

Query: 182 LNKMQVKLVKDSEYP-FKAQNGL---CHYFSGSH-----------------SGFSIKGYS 220
           L K    LV  + YP FK QN     C   S S                  S    +   
Sbjct: 296 LRKRG--LVSHACYPLFKDQNATNNGCAMASRSDGRGKRHATKPCPNNVEKSNRIYQCSP 353

Query: 221 AYDFSDQEDEMAKALLTFGPLVVIVDA-VSWQDYLGGIIQHHCSSGEAN--------HAV 271
            Y  S  E E+ K ++  GP+  I+     +  Y  GI +H  S+ + +        HAV
Sbjct: 354 PYRVSSNETEIMKEIMQNGPVQAIMQVREDFFHYKTGIYRHVTSTNKESEKYRKLQTHAV 413

Query: 272 LITGFDKTGSTP-----YWIVRNSWGSSWGVDGYAHVKMGSN 308
            +TG+            +WI  NSWG SWG +GY  +  G N
Sbjct: 414 KLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGVN 455


>gi|11545918 tubulointerstitial nephritis antigen-like 1 [Homo
           sapiens]
          Length = 467

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 66/260 (25%), Positives = 99/260 (38%), Gaps = 45/260 (17%)

Query: 104 PNVSLPLRFDWRDK--QVVTQVRNQQMCGGCWAFSVVGAVESAYAIK--GKPLEDLSVQQ 159
           P   LP  F+  +K   ++ +  +Q  C G WAFS         +I   G     LS Q 
Sbjct: 199 PGEVLPTAFEASEKWPNLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPVLSPQN 258

Query: 160 VIDC-SYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQN----------------- 201
           ++ C ++   GC GG    A  +L +  V  V D  YPF  +                  
Sbjct: 259 LLSCDTHQQQGCRGGRLDGAWWFLRRRGV--VSDHCYPFSGRERDEAGPAPPCMMHSRAM 316

Query: 202 GLCHYFSGSHSGFSIKGYS-------AYDFSDQEDEMAKALLTFGPLVVIVDA-VSWQDY 253
           G     + +H   S    +        Y     + E+ K L+  GP+  +++    +  Y
Sbjct: 317 GRGKRQATAHCPNSYVNNNDIYQVTPVYRLGSNDKEIMKELMENGPVQALMEVHEDFFLY 376

Query: 254 LGGIIQHHCSS--------GEANHAVLITGFDKT----GST-PYWIVRNSWGSSWGVDGY 300
            GGI  H   S            H+V ITG+ +     G T  YW   NSWG +WG  G+
Sbjct: 377 KGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGH 436

Query: 301 AHVKMGSNVCGIADSVSSIF 320
             +  G N C I   V  ++
Sbjct: 437 FRIVRGVNECDIESFVLGVW 456


>gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
           isoform 1 [Homo sapiens]
          Length = 953

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 20  GGDADSRAPFTPTWPRSREREAAAFRESLNRHRYLN 55
           G D  S+ P TP  P S + E A  R SL R  YL+
Sbjct: 476 GNDERSKKPGTPGTPGSHDLETALRRLSLRRENYLS 511


>gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
           isoform 2 [Homo sapiens]
          Length = 686

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 20  GGDADSRAPFTPTWPRSREREAAAFRESLNRHRYLN 55
           G D  S+ P TP  P S + E A  R SL R  YL+
Sbjct: 418 GNDERSKKPGTPGTPGSHDLETALRRLSLRRENYLS 453


>gi|115305569 adenosine A1 receptor [Homo sapiens]
          Length = 326

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 19/78 (24%)

Query: 106 VSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVV------------GAVESAYAIK---GK 150
           V +PLR+    K VVT  R      GCW  S V             AVE A+A     G+
Sbjct: 109 VKIPLRY----KMVVTPRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGE 164

Query: 151 PLEDLSVQQVIDCSYNNY 168
           P+     ++VI   Y  Y
Sbjct: 165 PVIKCEFEKVISMEYMVY 182


>gi|4501947 adenosine A1 receptor [Homo sapiens]
          Length = 326

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 19/78 (24%)

Query: 106 VSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVV------------GAVESAYAIK---GK 150
           V +PLR+    K VVT  R      GCW  S V             AVE A+A     G+
Sbjct: 109 VKIPLRY----KMVVTPRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGE 164

Query: 151 PLEDLSVQQVIDCSYNNY 168
           P+     ++VI   Y  Y
Sbjct: 165 PVIKCEFEKVISMEYMVY 182


>gi|4505579 furin preproprotein [Homo sapiens]
          Length = 794

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 6/52 (11%)

Query: 10 PWLLWLLCRGG------GDADSRAPFTPTWPRSREREAAAFRESLNRHRYLN 55
          PWLLW++   G       DA  +  FT TW        A       +H +LN
Sbjct: 5  PWLLWVVAATGTLVLLAADAQGQKVFTNTWAVRIPGGPAVANSVARKHGFLN 56


>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin c2 isoform b [Homo sapiens]
          Length = 1130

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 182 LNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSD 226
           L K+ +K   D    FKA   LCH  + ++   S +G+  YDF +
Sbjct: 73  LTKLPIKCFLD----FKAGGSLCHILAAAYKFKSDQGWRRYDFQN 113


>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin c2 isoform a [Homo sapiens]
          Length = 1214

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 182 LNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSD 226
           L K+ +K   D    FKA   LCH  + ++   S +G+  YDF +
Sbjct: 73  LTKLPIKCFLD----FKAGGSLCHILAAAYKFKSDQGWRRYDFQN 113


>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin c2 isoform c [Homo sapiens]
          Length = 1152

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 182 LNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSD 226
           L K+ +K   D    FKA   LCH  + ++   S +G+  YDF +
Sbjct: 73  LTKLPIKCFLD----FKAGGSLCHILAAAYKFKSDQGWRRYDFQN 113


>gi|157785649 leucine-rich repeats and IQ motif containing 3 [Homo
           sapiens]
          Length = 624

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 36  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGI------NQFSYL-FPEEFKAIYLRSK 88
           +RER   A  E LN+ +Y       EN             N+F+YL    E KA++L+ K
Sbjct: 449 ARERVRVAVNEHLNQKKYATQKLIEENKETIQNSLRQVWQNRFNYLEKARERKALFLKEK 508

Query: 89  PSK 91
             K
Sbjct: 509 SQK 511


>gi|21389491 family with sequence similarity 82, member A1 [Homo
           sapiens]
          Length = 573

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 272 LITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCG 311
           L  GF K  ++PYW    +   S    G+  +K  S+ CG
Sbjct: 79  LFVGFQKRNASPYWQQSRANFDSEEDTGFTDIKSSSDHCG 118


>gi|14861858 hypothetical protein LOC85411 [Homo sapiens]
          Length = 136

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 285 WIVRNSWGSSWGVDGYAH 302
           +I R  WGS W + GY H
Sbjct: 31  FIARRCWGSQWDITGYIH 48


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,446,862
Number of Sequences: 37866
Number of extensions: 529345
Number of successful extensions: 1129
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1062
Number of HSP's gapped (non-prelim): 36
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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