Search of human proteins with 4557361

Search of human proteins with 4557361

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4557361 BH3 interacting domain death agonist isoform 2 [Homo
sapiens]
         (195 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|37574726 BH3 interacting domain death agonist isoform 1 [Homo...   387   e-108
gi|4557361 BH3 interacting domain death agonist isoform 2 [Homo ...   387   e-108
gi|37574728 BH3 interacting domain death agonist isoform 3 [Homo...   194   5e-50
gi|41349497 pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...    31   0.58 
gi|73611906 phosphorylase kinase, beta isoform b [Homo sapiens]        31   0.58 
gi|154354966 inner membrane protein, mitochondrial isoform 3 [Ho...    31   0.58 
gi|154354962 inner membrane protein, mitochondrial isoform 2 [Ho...    31   0.58 
gi|154354964 inner membrane protein, mitochondrial isoform 1 [Ho...    31   0.58 
gi|22749297 oncoprotein-induced transcript 3 [Homo sapiens]            30   1.00 
gi|24308111 FGFR1 oncogene partner 2 [Homo sapiens]                    30   1.3  
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]             30   1.7  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     30   1.7  
gi|208022661 hypothetical protein LOC57701 [Homo sapiens]              29   2.2  
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora...    29   2.9  
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora...    29   2.9  
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora...    29   2.9  
gi|31657094 anillin, actin binding protein [Homo sapiens]              29   2.9  
gi|4507943 exportin 1 [Homo sapiens]                                   28   3.8  
gi|92091575 coiled-coil domain containing 57 [Homo sapiens]            28   3.8  
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa...    28   4.9  
gi|16262452 cingulin [Homo sapiens]                                    28   4.9  
gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens]         28   6.5  
gi|81295809 pericentrin [Homo sapiens]                                 28   6.5  
gi|31542634 filamin A interacting protein 1 [Homo sapiens]             28   6.5  
gi|39753961 IQ motif containing GTPase activating protein 3 [Hom...    28   6.5  
gi|17975763 myelin transcription factor 1 [Homo sapiens]               27   8.4  
gi|45237195 Janus kinase and microtubule interacting protein 2 [...    27   8.4  
gi|45356151 non-SMC condensin II complex, subunit D3 [Homo sapiens]    27   8.4  
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa...    27   8.4  
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap...    27   8.4  

>gi|37574726 BH3 interacting domain death agonist isoform 1 [Homo
           sapiens]
          Length = 241

 Score =  387 bits (994), Expect = e-108
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MDCEVNNGSSLRDECITNLLVFGFLQSCSDNSFRRELDALGHELPVLAPQWEGYDELQTD 60
           MDCEVNNGSSLRDECITNLLVFGFLQSCSDNSFRRELDALGHELPVLAPQWEGYDELQTD
Sbjct: 47  MDCEVNNGSSLRDECITNLLVFGFLQSCSDNSFRRELDALGHELPVLAPQWEGYDELQTD 106

Query: 61  GNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLVNGLALQLRNTSRSE 120
           GNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLVNGLALQLRNTSRSE
Sbjct: 107 GNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLVNGLALQLRNTSRSE 166

Query: 121 EDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFINQ 180
           EDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFINQ
Sbjct: 167 EDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFINQ 226

Query: 181 NLRTYVRSLARNGMD 195
           NLRTYVRSLARNGMD
Sbjct: 227 NLRTYVRSLARNGMD 241


>gi|4557361 BH3 interacting domain death agonist isoform 2 [Homo
           sapiens]
          Length = 195

 Score =  387 bits (994), Expect = e-108
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MDCEVNNGSSLRDECITNLLVFGFLQSCSDNSFRRELDALGHELPVLAPQWEGYDELQTD 60
           MDCEVNNGSSLRDECITNLLVFGFLQSCSDNSFRRELDALGHELPVLAPQWEGYDELQTD
Sbjct: 1   MDCEVNNGSSLRDECITNLLVFGFLQSCSDNSFRRELDALGHELPVLAPQWEGYDELQTD 60

Query: 61  GNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLVNGLALQLRNTSRSE 120
           GNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLVNGLALQLRNTSRSE
Sbjct: 61  GNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLVNGLALQLRNTSRSE 120

Query: 121 EDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFINQ 180
           EDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFINQ
Sbjct: 121 EDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFINQ 180

Query: 181 NLRTYVRSLARNGMD 195
           NLRTYVRSLARNGMD
Sbjct: 181 NLRTYVRSLARNGMD 195


>gi|37574728 BH3 interacting domain death agonist isoform 3 [Homo
           sapiens]
          Length = 99

 Score =  194 bits (492), Expect = 5e-50
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 97  MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA 156
           MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA
Sbjct: 1   MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLA 60

Query: 157 KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD 195
           KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD
Sbjct: 61  KKVASHTPSLLRDVFHTTVNFINQNLRTYVRSLARNGMD 99


>gi|41349497 pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo
           sapiens]
          Length = 529

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 75  DSESQEDIIRNIARHLAQVG----DSMDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATA 130
           D  S ED++R +  HLA+      D   R    GL+  L LQ + +   E D+N   AT 
Sbjct: 416 DMLSNEDVVRLVVGHLAEADWHKTDLAQRPANLGLMQSLLLQRKASGLHEADQN--AATR 473

Query: 131 LEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFIN 179
           L +         E E   L   L L + +A     + RD    TV + N
Sbjct: 474 LIRHAIGNNEYGEMEAERLAAMLTLPEDLA----RMYRDDITVTVVYFN 518


>gi|73611906 phosphorylase kinase, beta isoform b [Homo sapiens]
          Length = 1086

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 2/129 (1%)

Query: 52  EGYDELQTDGNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLVNGLAL 111
           EG + +  +G  S H       A S+    ++R  A  L++V DS+  SI   LV G  +
Sbjct: 744 EGPNFITKEGTVSDHIERVYRRAGSQKLWSVVRRAASLLSKVVDSLAPSITNVLVQGKQV 803

Query: 112 QLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAK--KVASHTPSLLRD 169
            L      EE  +  L+  + Q +  Y  +   E+  ++   L+     + S+ P L   
Sbjct: 804 TLGAFGHEEEVISNPLSPRVIQNIIYYKCNTHDEREAVIQQELVIHIGWIISNNPELFSG 863

Query: 170 VFHTTVNFI 178
           +    + +I
Sbjct: 864 MLKIRIGWI 872


>gi|154354966 inner membrane protein, mitochondrial isoform 3 [Homo
           sapiens]
          Length = 747

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 40/144 (27%)

Query: 31  NSFRRELDALGHELPVLAPQWEGY------DELQTDGNRS----SHSRLGRIEADSESQE 80
           + F+RELD++    P + P W+G       D+L TD   S    +H R+ ++  +   Q+
Sbjct: 356 DDFKRELDSI---TPEVLPGWKGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELAEQK 412

Query: 81  D------------------------IIRNIARHLAQVGDSMDRSIPP---GLVNGLALQL 113
                                    + + +  H +++    DR I      + N +  QL
Sbjct: 413 ATEKQHITLALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMRTQL 472

Query: 114 RNTSRSEEDRNRDLATALEQLLQA 137
           R  + +  D  RD+    EQ L++
Sbjct: 473 RRQAAAHTDHLRDVLRVQEQELKS 496


>gi|154354962 inner membrane protein, mitochondrial isoform 2 [Homo
           sapiens]
          Length = 757

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 40/144 (27%)

Query: 31  NSFRRELDALGHELPVLAPQWEGY------DELQTDGNRS----SHSRLGRIEADSESQE 80
           + F+RELD++    P + P W+G       D+L TD   S    +H R+ ++  +   Q+
Sbjct: 366 DDFKRELDSI---TPEVLPGWKGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELAEQK 422

Query: 81  D------------------------IIRNIARHLAQVGDSMDRSIPP---GLVNGLALQL 113
                                    + + +  H +++    DR I      + N +  QL
Sbjct: 423 ATEKQHITLALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMRTQL 482

Query: 114 RNTSRSEEDRNRDLATALEQLLQA 137
           R  + +  D  RD+    EQ L++
Sbjct: 483 RRQAAAHTDHLRDVLRVQEQELKS 506


>gi|154354964 inner membrane protein, mitochondrial isoform 1 [Homo
           sapiens]
          Length = 758

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 40/144 (27%)

Query: 31  NSFRRELDALGHELPVLAPQWEGY------DELQTDGNRS----SHSRLGRIEADSESQE 80
           + F+RELD++    P + P W+G       D+L TD   S    +H R+ ++  +   Q+
Sbjct: 367 DDFKRELDSI---TPEVLPGWKGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELAEQK 423

Query: 81  D------------------------IIRNIARHLAQVGDSMDRSIPP---GLVNGLALQL 113
                                    + + +  H +++    DR I      + N +  QL
Sbjct: 424 ATEKQHITLALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMRTQL 483

Query: 114 RNTSRSEEDRNRDLATALEQLLQA 137
           R  + +  D  RD+    EQ L++
Sbjct: 484 RRQAAAHTDHLRDVLRVQEQELKS 507


>gi|22749297 oncoprotein-induced transcript 3 [Homo sapiens]
          Length = 545

 Score = 30.4 bits (67), Expect = 1.00
 Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 19/122 (15%)

Query: 2   DCEVNNGSSLRDECITNLLVFGFLQSCSDNSFRRELDALGHELPVLAPQWEGYDELQTDG 61
           +CE NNG     E   NL           NS+R E   +G  L       E  +    + 
Sbjct: 185 ECEQNNGGC--SEICVNL----------KNSYRCEC-GVGRVLRSDGKTCEDVEGCHNNN 231

Query: 62  NRSSHSRLGRIEA-DSESQEDIIRNIARHLAQV-----GDSMDRSIPPGLVNGLALQLRN 115
              SHS LG  +    E    ++ +   H  QV      ++++ +IP  LV GL L L N
Sbjct: 232 GGCSHSCLGSEKGYQCECPRGLVLSEDNHTCQVPVLCKSNAIEVNIPRELVGGLELFLTN 291

Query: 116 TS 117
           TS
Sbjct: 292 TS 293


>gi|24308111 FGFR1 oncogene partner 2 [Homo sapiens]
          Length = 253

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 14/113 (12%)

Query: 71  RIEADSESQEDI--IRNIARHLAQVGDSMDRSIPPGLVNGLALQLRNTSRSEEDRNRDLA 128
           R+EA  + QE+I  +  +ARH  +            LV G+  + R   R  +  N++L 
Sbjct: 39  RVEAMKQYQEEIQELNEVARHRPR----------STLVMGIQQENRQI-RELQQENKELR 87

Query: 129 TALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFINQN 181
           T+LE+   A    M K +  +   L+ +KK        L++  H+ ++ +++N
Sbjct: 88  TSLEEHQSALELIMSKYREQMFRLLMASKKDDPGIIMKLKEQ-HSKIDMVHRN 139


>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
          Length = 340

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 7/121 (5%)

Query: 49  PQWEGYDELQTDGNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLVNG 108
           P  E  DE + D       +  R   D+ +Q++ I+N A +L   G S     PP  V+G
Sbjct: 169 PAAECLDEYEDD----EAGQKERKREDAITQQNTIQNEAVNLLDPGSSYLLQEPPRTVSG 224

Query: 109 LALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLR 168
                  TS SEED +   +         Y RD     T LV +  L KK+      ++R
Sbjct: 225 --RYKSTTSVSEEDVSSRYSRTDRSGFPRYNRDANVSGT-LVSSSTLEKKIEDLEKEVVR 281

Query: 169 D 169
           +
Sbjct: 282 E 282


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 8/73 (10%)

Query: 125  RDLATALEQLLQAYPRDMEKEK-------TMLVLALLLAKKVASHTPSLLRD-VFHTTVN 176
            RDL T LE+L + Y + +E+E+       T++ L   LA+K    + S L++  F   ++
Sbjct: 2075 RDLQTQLEELQKKYQQKLEQEENPGNDNVTIMELQTQLAQKTTLISDSKLKEQEFREQIH 2134

Query: 177  FINQNLRTYVRSL 189
             +   L+ Y +++
Sbjct: 2135 NLEDRLKKYEKNV 2147


>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
          Length = 1334

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 94  GDSMDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLAL 153
           G+  D S+ PG    L  +LR      E  N  LA A E   + Y R +++    +V AL
Sbjct: 18  GEGDDGSMEPGTCQELLHRLREL----EAENSALAQANENQRETYERCLDEVANHVVQAL 73

Query: 154 LLAKKVASHTPSLLRDVF 171
           L  K +      L + VF
Sbjct: 74  LNQKDLREECIKLKKRVF 91


>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 1 [Homo
            sapiens]
          Length = 1834

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 50   QWEGYDE---LQTDGNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLV 106
            QW  Y+E   + TD N SS +      +  E +ED    + RH  ++  +MDR     + 
Sbjct: 1247 QWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERH--RIEAAMDRKSDSDMW 1304

Query: 107  NGLALQLRNTSRSEEDRN 124
               +  L +++ S+E  N
Sbjct: 1305 INQSSSLDSSTSSQEHLN 1322


>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 2 [Homo
            sapiens]
          Length = 1651

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 50   QWEGYDE---LQTDGNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLV 106
            QW  Y+E   + TD N SS +      +  E +ED    + RH  ++  +MDR     + 
Sbjct: 1248 QWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERH--RIEAAMDRKSDSDMW 1305

Query: 107  NGLALQLRNTSRSEEDRN 124
               +  L +++ S+E  N
Sbjct: 1306 INQSSSLDSSTSSQEHLN 1323


>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 3 [Homo
            sapiens]
          Length = 1612

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 50   QWEGYDE---LQTDGNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLV 106
            QW  Y+E   + TD N SS +      +  E +ED    + RH  ++  +MDR     + 
Sbjct: 1232 QWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERH--RIEAAMDRKSDSDMW 1289

Query: 107  NGLALQLRNTSRSEEDRN 124
               +  L +++ S+E  N
Sbjct: 1290 INQSSSLDSSTSSQEHLN 1307


>gi|31657094 anillin, actin binding protein [Homo sapiens]
          Length = 1124

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 55  DELQTDGNRSSHSRLGRIEADSESQEDIIRNIARH--LAQVGDSMDRSIPPGLVNGLALQ 112
           +E + D  +S       +   SE QED + NI+    LA +  ++    P  LV+   L+
Sbjct: 574 EEGELDMEKSQEEMDQALAESSEEQEDAL-NISSMSLLAPLAQTVGVVSPESLVSTPRLE 632

Query: 113 LRNTSRSEE 121
           L++TSRS+E
Sbjct: 633 LKDTSRSDE 641


>gi|4507943 exportin 1 [Homo sapiens]
          Length = 1071

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 140 RDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFINQNLRTY 185
           R+ E   TM ++   L   + +  P +   VF  T+N IN++   Y
Sbjct: 796 REPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEY 841


>gi|92091575 coiled-coil domain containing 57 [Homo sapiens]
          Length = 915

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 34  RRELDALGHEL-PVLAPQWEGYDELQTD----GNRSSHSRLGRIEADSESQEDIIRNIAR 88
           R+E++AL H++ P +    E  D  Q D    G+ ++   +  +EA+  + +   + + +
Sbjct: 539 RKEMEALSHQIPPPIQTAAESTDANQPDPEAGGDAATPDYVLALEAEIRTLKHKFKTLEK 598

Query: 89  HLAQVGDSMDRSIP 102
           HL  V D +  S P
Sbjct: 599 HLEDVLDPLKMSSP 612


>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
           sapiens]
          Length = 631

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 5/119 (4%)

Query: 57  LQTDGNRSSHSRLGRIEADSESQEDIIRNIARH----LAQVGDSMDRSIPP-GLVNGLAL 111
           LQ +G  S H  L +   +   Q +  R         L Q+ +  +R +    L+     
Sbjct: 313 LQAEGKTSLHKDLKQKRREQREQRERRRAAKEEELLRLQQLQEEKERKLQELELLQEAQR 372

Query: 112 QLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDV 170
           Q     + EE+R R     L+Q L+   R+ E+ +  +   + L ++ A+     ++++
Sbjct: 373 QAERLLQEEEERRRSQHRELQQALEGQLREAEQARASMQAEMELKEEEAARQRQRIKEL 431


>gi|16262452 cingulin [Homo sapiens]
          Length = 1203

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 97  MDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVL 151
           +D+ +    + GL  +  N  RS++DR R L   LE+ +     ++++EK  + L
Sbjct: 934 LDKELLAQRLQGLEQEAENKKRSQDDRARQL-KGLEEKVSRLETELDEEKNTVEL 987


>gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens]
          Length = 728

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 10/134 (7%)

Query: 51  WEGYDELQTD-GNRSSHSRLGRIEADSESQEDIIRNIARHLAQVGDSMDRSIPPGLVNGL 109
           W  Y  L  D   +   +RLGR   D + + D      R + +V      SI P   +  
Sbjct: 281 WRAYILLSQDYTGKEEQARLGRCLDDVKEKFDYGNKYKRRVPRVSSEPPASIRPKTDDTS 340

Query: 110 ALQLRNTSRSEEDRN----RDLATALEQLLQA-YPRD-MEKEKTMLVLALLLAKKVASHT 163
           +   ++ + SE+D+     R LA +  + L   +PR  +   +          K+++ H 
Sbjct: 341 S---QSPAPSEKDKPSSWLRTLAGSSNKSLGCVHPRQRLSAFRPWSPAVSASEKELSPHL 397

Query: 164 PSLLRDVFHTTVNF 177
           P+L+RD F++  +F
Sbjct: 398 PALIRDSFYSYKSF 411


>gi|81295809 pericentrin [Homo sapiens]
          Length = 3336

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 40/137 (29%), Positives = 54/137 (39%), Gaps = 16/137 (11%)

Query: 23   GFLQSCSDNSFRRELDALGHELPVLAPQWEGYDELQTDGNRSSHSRLGRIEADSESQEDI 82
            G L      +F +E +  G EL    P+  G D     G  SS   L R+E     Q D+
Sbjct: 2451 GDLLQVVQEAFEKEQEMQGVELQ---PRLSGSDL----GGHSS--LLERLEKIIREQGDL 2501

Query: 83   IRNIARHLAQVGDSMDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQLLQAYPRDM 142
                  HL       DRS     +  L  QLR T    +++ + L TA   L  A  R  
Sbjct: 2502 QEKSLEHLRLP----DRSSLLSEIQALRAQLRMTHLQNQEKLQHLRTA---LTSAEARGS 2554

Query: 143  EKEKTMLVLALLLAKKV 159
            ++E  +     LLA KV
Sbjct: 2555 QQEHQLRRQVELLAYKV 2571


>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
          Length = 1213

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 71  RIEADSESQEDIIRNIARHLAQVGDSM--DRSIPPGLVNGLALQLRNTSRSEEDRNRDLA 128
           ++E    +++D    +++ L ++   +  +++I  G V     +LR+  R EE ++RDL 
Sbjct: 662 QLEQKFRTEQDKANFLSQQLEEIKHQIAKNKAIEKGEVVSQEAELRHRFRLEEAKSRDLK 721

Query: 129 TALEQLLQAYPRDMEKE 145
             ++ L +     M KE
Sbjct: 722 AEVQALKEKIHELMNKE 738


>gi|39753961 IQ motif containing GTPase activating protein 3 [Homo
            sapiens]
          Length = 1631

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 76   SESQEDIIRNIARHLAQVGDSMDRSIPPGLVNGLALQLRNTSRSEEDRNRDL 127
            +E Q  ++RN+ R L  +G    R+   GLV+ LA  +RN  R    R  +L
Sbjct: 1434 AEKQRRVLRNL-RRLEALGLVSARNGYQGLVDELAKDIRNQHRHRHRRKAEL 1484


>gi|17975763 myelin transcription factor 1 [Homo sapiens]
          Length = 1121

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 24  FLQSCSDNSFRRELDALGHELPVLAPQWEGYDELQTDGNR--SSHSRLGRIEADSESQED 81
           F +  S  S ++  +  G E P   P++    E+++D ++   +HSR   +  +SE Q+ 
Sbjct: 313 FQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDESEMQDM 372

Query: 82  IIRN--------IARHLAQVGDSMDRSIPPGLVNGLAL 111
           + R         IA    QV    +   PP   + L L
Sbjct: 373 MTRGNLGLLEQAIALKAEQVRTVCEPGCPPAEQSQLGL 410


>gi|45237195 Janus kinase and microtubule interacting protein 2
           [Homo sapiens]
          Length = 810

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 16/149 (10%)

Query: 32  SFRRELDALGHELPVLAPQWEGYDEL-----QTDGNRSSHSRL--GRIEADSE--SQEDI 82
           S  +EL+     +  L  Q E  DE      + + N SS  R   GR    SE  S  D+
Sbjct: 222 SLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDL 281

Query: 83  IRN---IARHLAQVGDSMDRSIPPGLV-NGLALQLRNTSRSEE---DRNRDLATALEQLL 135
            RN   IA   A +    DR+   G   N L  ++R T +  +   +RN+ LA   ++L+
Sbjct: 282 RRNQKRIAELNATIRKLEDRNTLLGDERNELLKRVRETEKQCKPLLERNKCLAKRNDELM 341

Query: 136 QAYPRDMEKEKTMLVLALLLAKKVASHTP 164
            +  R  EK K +      + +K+ SH P
Sbjct: 342 VSLQRMEEKLKAVTKENSEMREKITSHPP 370


>gi|45356151 non-SMC condensin II complex, subunit D3 [Homo sapiens]
          Length = 1498

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 68  RLGRIEADSESQEDIIRNIARHLAQV-GDSMDRSIPPGLVNGLALQLRNTSRSEEDRNRD 126
           RL R  A++ ++E  +      L QV GD +  S     ++ + L+   T   +ED    
Sbjct: 804 RLCRASAETPAEEQEL------LTQVCGDVL--STCEHRLSNIVLKENGTGNMDEDLLVK 855

Query: 127 LATALEQLLQAYPRDMEKEKTMLVLALLLAKKVASHTPS 165
               L  + Q  P  +EK   +L+ ++L +   A H+PS
Sbjct: 856 YIFTLGDIAQLCPARVEKRIFLLIQSVLASSADADHSPS 894


>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
           sapiens]
          Length = 1185

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 118 RSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVAS 161
           R  ED+NR L   LE   Q   + + K +T+  +   LA++VA+
Sbjct: 358 RQTEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAA 401


>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo
           sapiens]
          Length = 1202

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 118 RSEEDRNRDLATALEQLLQAYPRDMEKEKTMLVLALLLAKKVAS 161
           R  ED+NR L   LE   Q   + + K +T+  +   LA++VA+
Sbjct: 358 RQTEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAA 401


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,853,773
Number of Sequences: 37866
Number of extensions: 268101
Number of successful extensions: 842
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 831
Number of HSP's gapped (non-prelim): 32
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.