Guide to the Human Genome
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Name: PDP2 Sequence: fasta or formatted (529aa) NCBI GI: 41349497
Description:

pyruvate dehydrogenase phosphatase isoenzyme 2

Referenced in:

Serine / Threonine Protein Phosphatases
TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         40           2
 C cysteine            1.5          8           1
 D aspartate           5.5         29           2
 E glutamate           7.4         39           2
 F phenylalanine       2.6         14           1
 G glycine             5.9         31           2
 H histidine           4.3         23           1
 I isoleucine          4.0         21           2
 K lysine              2.6         14           1
 L leucine            12.9         68           3
 M methionine          3.2         17           1
 N asparagine          4.3         23           2
 P proline             4.0         21           2
 Q glutamine           4.0         21           1
 R arginine            6.8         36           2
 S serine              7.6         40           2
 T threonine           4.9         26           2
 V valine              5.7         30           2
 W tryptophan          1.7          9           1
 Y tyrosine            3.6         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo... 
PDP1                  0.458   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP1                  0.458   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.458   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.458   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.458   pyruvate dehyrogenase phosphatase catalytic subunit...
PPM1L                 0.037   protein phosphatase 1 (formerly 2C)-like 
PPM1G                 0.035   protein phosphatase 1G 
PPM1G                 0.035   protein phosphatase 1G 
PPM1B                 0.031   protein phosphatase 1B isoform 5 
PPM1B                 0.031   protein phosphatase 1B isoform 4 
PPM1B                 0.031   protein phosphatase 1B isoform 2 
PPM1B                 0.031   protein phosphatase 1B isoform 1 
ILKAP                 0.031   integrin-linked kinase-associated protein phosphatas...
PPM1D                 0.028   protein phosphatase 1D 
PPM1J                 0.024   protein phosphatase 1J (PP2C domain containing) [Hom...
FLJ40125              0.023   protein phosphatase 1B-like 
PPM1H                 0.022   protein phosphatase 1H (PP2C domain containing) [Ho...
PPM1A                 0.022   protein phosphatase 1A isoform 1 
PPM1A                 0.022   protein phosphatase 1A isoform 2 
PPM1A                 0.022   protein phosphatase 1A isoform 3 
PPM1F                 0.021   protein phosphatase 1F 
PHLPP1                0.018   PH domain and leucine rich repeat protein phosphatas...
PPM1M                 0.018   protein phosphatase 1M isoform a 
PPM1M                 0.018   protein phosphatase 1M isoform b 
PPM1K                 0.014   protein phosphatase 1K (PP2C domain containing) [Ho...
CAMK1                 0.011   calcium/calmodulin-dependent protein kinase I 
MAP3K7IP1             0.011   mitogen-activated protein kinase kinase kinase 7 inte...
MAP3K7IP1             0.011   mitogen-activated protein kinase kinase kinase 7 int...
PPM1E                 0.008   protein phosphatase 1E 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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