Guide to the Human Genome
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Name: SLFNL1 Sequence: fasta or formatted (407aa) NCBI GI: 45267821
Description:

schlafen-like 1

Referenced in:

T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         23           2
 C cysteine            2.2          9           2
 D aspartate           3.7         15           1
 E glutamate           9.3         38           5
 F phenylalanine       2.9         12           1
 G glycine             6.4         26           2
 H histidine           3.2         13           2
 I isoleucine          2.9         12           1
 K lysine              3.7         15           1
 L leucine            12.3         50           3
 M methionine          2.0          8           2
 N asparagine          0.7          3           1
 P proline             6.9         28           1
 Q glutamine           8.1         33           3
 R arginine            6.1         25           2
 S serine              8.8         36           1
 T threonine           4.9         20           1
 V valine              7.1         29           2
 W tryptophan          1.2          5           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   schlafen-like 1 
SLFN11                0.019   schlafen family member 11 
SLFN11                0.019   schlafen family member 11 
SLFN11                0.019   schlafen family member 11 
SLFN11                0.019   schlafen family member 11 
SLFN11                0.019   schlafen family member 11 
SLFN14                0.019   schlafen family member 14 
SLFN13                0.016   schlafen family member 13 
SLFN12                0.015   schlafen family member 12 
PPARGC1B              0.011   peroxisome proliferator-activated receptor gamma, co...
HOOK2                 0.011   hook homolog 2 isoform 2 
HOOK2                 0.011   hook homolog 2 isoform 1 
SLFN12L               0.010   schlafen family member 12-like 
SORBS2                0.010   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.010   sorbin and SH3 domain containing 2 isoform 4 
TNIP3                 0.010   TNFAIP3 interacting protein 3 
TNIP3                 0.010   TNFAIP3 interacting protein 3 
AKNA                  0.010   AT-hook transcription factor 
ZNF853                0.009   zinc finger protein 853 
ZNF335                0.009   zinc finger protein 335 
AGAP2                 0.009   centaurin, gamma 1 isoform PIKE-L 
LOC100287290          0.008   PREDICTED: hypothetical protein 
LOC100287290          0.008   PREDICTED: hypothetical protein XP_002342446 
PPP1R15A              0.008   protein phosphatase 1, regulatory subunit 15A [Homo...
TAOK2                 0.008   TAO kinase 2 isoform 2 
CABIN1                0.008   calcineurin binding protein 1 
RREB1                 0.008   ras responsive element binding protein 1 isoform 2 [...
RREB1                 0.008   ras responsive element binding protein 1 isoform 1 [...
ZNF397                0.008   zinc finger protein 397 isoform 1 
ZNF397                0.008   zinc finger protein 397 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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