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Search of human proteins with 4507887
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507887 vascular endothelial growth factor B [Homo sapiens]
(207 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507887 vascular endothelial growth factor B [Homo sapiens] 427 e-120
gi|76781485 vascular endothelial growth factor A isoform f precu... 104 5e-23
gi|76781484 vascular endothelial growth factor A isoform e precu... 104 5e-23
gi|76781483 vascular endothelial growth factor A isoform d precu... 104 5e-23
gi|76781482 vascular endothelial growth factor A isoform c precu... 104 5e-23
gi|76781481 vascular endothelial growth factor A isoform b precu... 104 5e-23
gi|76781480 vascular endothelial growth factor A isoform a precu... 104 5e-23
gi|76781487 vascular endothelial growth factor A isoform g precu... 104 5e-23
gi|20149543 placental growth factor, vascular endothelial growth... 77 1e-14
gi|4758378 vascular endothelial growth factor D preproprotein [H... 60 2e-09
gi|4885653 vascular endothelial growth factor C preproprotein [H... 59 3e-09
gi|15451786 platelet-derived growth factor beta isoform 2 prepro... 52 3e-07
gi|4505681 platelet-derived growth factor beta isoform 1 preprop... 52 3e-07
gi|77695917 platelet-derived growth factor alpha isoform 1 prepr... 51 8e-07
gi|15208656 platelet-derived growth factor alpha isoform 2 prepr... 50 1e-06
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 46 3e-05
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 45 6e-05
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 45 6e-05
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 45 6e-05
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 44 1e-04
gi|24497513 homeobox A3 isoform a [Homo sapiens] 42 5e-04
gi|13562112 homeobox A3 isoform a [Homo sapiens] 42 5e-04
gi|9994187 platelet-derived growth factor C precursor [Homo sapi... 41 6e-04
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 41 8e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 41 8e-04
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 41 8e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 40 0.001
gi|19924103 synapsin II isoform IIa [Homo sapiens] 40 0.002
gi|195963410 MEF2 activating motif and SAP domain containing tra... 39 0.002
gi|32698970 MEF2 activating motif and SAP domain containing tran... 39 0.002
>gi|4507887 vascular endothelial growth factor B [Homo sapiens]
Length = 207
Score = 427 bits (1097), Expect = e-120
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MSPLLRRLLLAALLQLAPAQAPVSQPDAPGHQRKVVSWIDVYTRATCQPREVVVPLTVEL 60
MSPLLRRLLLAALLQLAPAQAPVSQPDAPGHQRKVVSWIDVYTRATCQPREVVVPLTVEL
Sbjct: 1 MSPLLRRLLLAALLQLAPAQAPVSQPDAPGHQRKVVSWIDVYTRATCQPREVVVPLTVEL 60
Query: 61 MGTVAKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIRYPSSQLGEMSLEEHS 120
MGTVAKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIRYPSSQLGEMSLEEHS
Sbjct: 61 MGTVAKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIRYPSSQLGEMSLEEHS 120
Query: 121 QCECRPKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAP 180
QCECRPKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAP
Sbjct: 121 QCECRPKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAP 180
Query: 181 STTSALTPGPAAAAADAAASSVAKGGA 207
STTSALTPGPAAAAADAAASSVAKGGA
Sbjct: 181 STTSALTPGPAAAAADAAASSVAKGGA 207
>gi|76781485 vascular endothelial growth factor A isoform f
precursor [Homo sapiens]
Length = 327
Score = 104 bits (260), Expect = 5e-23
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 10 LAALLQLAPAQAPVSQPDAPG---HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAK 66
LA LL L A+ + P A G + +VV ++DVY R+ C P E +V + E +
Sbjct: 192 LALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEY 251
Query: 67 QLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIR-YPSSQLGEMSLEEHSQCECR 125
PSCV + RCGGCC D+GLECVPT + + MQI+ I+ + +GEMS +H++CECR
Sbjct: 252 IFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECR 311
Query: 126 PKK 128
PKK
Sbjct: 312 PKK 314
>gi|76781484 vascular endothelial growth factor A isoform e
precursor [Homo sapiens]
Length = 354
Score = 104 bits (260), Expect = 5e-23
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 10 LAALLQLAPAQAPVSQPDAPG---HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAK 66
LA LL L A+ + P A G + +VV ++DVY R+ C P E +V + E +
Sbjct: 192 LALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEY 251
Query: 67 QLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIR-YPSSQLGEMSLEEHSQCECR 125
PSCV + RCGGCC D+GLECVPT + + MQI+ I+ + +GEMS +H++CECR
Sbjct: 252 IFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECR 311
Query: 126 PKK 128
PKK
Sbjct: 312 PKK 314
>gi|76781483 vascular endothelial growth factor A isoform d
precursor [Homo sapiens]
Length = 371
Score = 104 bits (260), Expect = 5e-23
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 10 LAALLQLAPAQAPVSQPDAPG---HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAK 66
LA LL L A+ + P A G + +VV ++DVY R+ C P E +V + E +
Sbjct: 192 LALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEY 251
Query: 67 QLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIR-YPSSQLGEMSLEEHSQCECR 125
PSCV + RCGGCC D+GLECVPT + + MQI+ I+ + +GEMS +H++CECR
Sbjct: 252 IFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECR 311
Query: 126 PKK 128
PKK
Sbjct: 312 PKK 314
>gi|76781482 vascular endothelial growth factor A isoform c
precursor [Homo sapiens]
Length = 389
Score = 104 bits (260), Expect = 5e-23
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 10 LAALLQLAPAQAPVSQPDAPG---HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAK 66
LA LL L A+ + P A G + +VV ++DVY R+ C P E +V + E +
Sbjct: 192 LALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEY 251
Query: 67 QLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIR-YPSSQLGEMSLEEHSQCECR 125
PSCV + RCGGCC D+GLECVPT + + MQI+ I+ + +GEMS +H++CECR
Sbjct: 252 IFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECR 311
Query: 126 PKK 128
PKK
Sbjct: 312 PKK 314
>gi|76781481 vascular endothelial growth factor A isoform b
precursor [Homo sapiens]
Length = 395
Score = 104 bits (260), Expect = 5e-23
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 10 LAALLQLAPAQAPVSQPDAPG---HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAK 66
LA LL L A+ + P A G + +VV ++DVY R+ C P E +V + E +
Sbjct: 192 LALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEY 251
Query: 67 QLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIR-YPSSQLGEMSLEEHSQCECR 125
PSCV + RCGGCC D+GLECVPT + + MQI+ I+ + +GEMS +H++CECR
Sbjct: 252 IFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECR 311
Query: 126 PKK 128
PKK
Sbjct: 312 PKK 314
>gi|76781480 vascular endothelial growth factor A isoform a
precursor [Homo sapiens]
Length = 412
Score = 104 bits (260), Expect = 5e-23
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 10 LAALLQLAPAQAPVSQPDAPG---HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAK 66
LA LL L A+ + P A G + +VV ++DVY R+ C P E +V + E +
Sbjct: 192 LALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEY 251
Query: 67 QLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIR-YPSSQLGEMSLEEHSQCECR 125
PSCV + RCGGCC D+GLECVPT + + MQI+ I+ + +GEMS +H++CECR
Sbjct: 252 IFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECR 311
Query: 126 PKK 128
PKK
Sbjct: 312 PKK 314
>gi|76781487 vascular endothelial growth factor A isoform g
precursor [Homo sapiens]
Length = 371
Score = 104 bits (260), Expect = 5e-23
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 10 LAALLQLAPAQAPVSQPDAPG---HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAK 66
LA LL L A+ + P A G + +VV ++DVY R+ C P E +V + E +
Sbjct: 192 LALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEY 251
Query: 67 QLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIR-YPSSQLGEMSLEEHSQCECR 125
PSCV + RCGGCC D+GLECVPT + + MQI+ I+ + +GEMS +H++CECR
Sbjct: 252 IFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECR 311
Query: 126 PKK 128
PKK
Sbjct: 312 PKK 314
>gi|20149543 placental growth factor, vascular endothelial growth
factor-related protein [Homo sapiens]
Length = 170
Score = 76.6 bits (187), Expect = 1e-14
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 3 PLLRRLLLAALLQLAPAQAPVSQPDAPGHQRKVVSWIDVYTRATCQPREVVVPLTVELMG 62
P +LL L P Q + +VV + +V+ R+ C+ E +V + E
Sbjct: 8 PCFLQLLAGLALPAVPPQQWALSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPS 67
Query: 63 TVAKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIRY-PSSQLGEMSLEEHSQ 121
V PSCV++ RC GCC D+ L CVP V MQ+L IR E++ +H +
Sbjct: 68 EVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVR 127
Query: 122 CECRPKKKDSAVKPDR 137
CECRP ++ +KP+R
Sbjct: 128 CECRPLRE--KMKPER 141
>gi|4758378 vascular endothelial growth factor D preproprotein [Homo
sapiens]
Length = 354
Score = 59.7 bits (143), Expect = 2e-09
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 42 YTRATCQPREVVVPLTVELMGTVAKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQI 101
+ R C PRE V + EL + P CV V RCGGCC ++ L C+ T + Q+
Sbjct: 106 WQRTQCSPRETCVEVASELGKSTNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISKQL 165
Query: 102 LMIRYPSSQLGEM---SLEEHSQCECRP 126
I P + + E+ + H+ C+C P
Sbjct: 166 FEISVPLTSVPELVPVKVANHTGCKCLP 193
>gi|4885653 vascular endothelial growth factor C preproprotein [Homo
sapiens]
Length = 419
Score = 58.9 bits (141), Expect = 3e-09
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 28 APGHQRKVVSWIDVYTRAT-CQPREVVVPLTVELMGTVAKQLVPSCVTVQRCGGCCPDDG 86
A + +++ ID R T C PREV + + E P CV+V RCGGCC +G
Sbjct: 111 AAHYNTEILKSIDNEWRKTQCMPREVCIDVGKEFGVATNTFFKPPCVSVYRCGGCCNSEG 170
Query: 87 LECVPTGQHQVRMQILMIRYPSSQLGE---MSLEEHSQCECRPK 127
L+C+ T + + I P SQ + +S H+ C C K
Sbjct: 171 LQCMNTSTSYLSKTLFEITVPLSQGPKPVTISFANHTSCRCMSK 214
>gi|15451786 platelet-derived growth factor beta isoform 2
preproprotein [Homo sapiens]
Length = 226
Score = 52.4 bits (124), Expect = 3e-07
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 45 ATCQPREVVVPLTVELMG-TVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQH----QVR 98
A C+ R V ++ L+ T A LV P CV VQRC GCC + ++C PT QVR
Sbjct: 80 AECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVR 139
Query: 99 MQILMIRYPSSQLGEMSLEEHSQCEC------RP-KKKDSAVKPDRAATPHHRPQPRSV 150
++ + P + ++LE+H C+C RP + + RA TP R R+V
Sbjct: 140 KIEIVRKKPIFKKATVTLEDHLACKCETVAAARPVTRSPGGSQEQRAKTPQTRVTIRTV 198
>gi|4505681 platelet-derived growth factor beta isoform 1
preproprotein [Homo sapiens]
Length = 241
Score = 52.4 bits (124), Expect = 3e-07
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 45 ATCQPREVVVPLTVELMG-TVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQH----QVR 98
A C+ R V ++ L+ T A LV P CV VQRC GCC + ++C PT QVR
Sbjct: 95 AECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVR 154
Query: 99 MQILMIRYPSSQLGEMSLEEHSQCEC------RP-KKKDSAVKPDRAATPHHRPQPRSV 150
++ + P + ++LE+H C+C RP + + RA TP R R+V
Sbjct: 155 KIEIVRKKPIFKKATVTLEDHLACKCETVAAARPVTRSPGGSQEQRAKTPQTRVTIRTV 213
>gi|77695917 platelet-derived growth factor alpha isoform 1
preproprotein [Homo sapiens]
Length = 211
Score = 50.8 bits (120), Expect = 8e-07
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 45 ATCQPREVVVPLT-VELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 102
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
Query: 103 MIRY----PSSQLGEMSLEEHSQCECRPKKKDSAVKPDRAATPHHRPQ 146
+ Y P + ++ LEEH +C C +++ PD RP+
Sbjct: 154 KVEYVRKKPKLKEVQVRLEEHLECAC----ATTSLNPDYREEDTGRPR 197
>gi|15208656 platelet-derived growth factor alpha isoform 2
preproprotein [Homo sapiens]
Length = 196
Score = 50.1 bits (118), Expect = 1e-06
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 45 ATCQPREVVVPLT-VELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 102
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
Query: 103 MIRY----PSSQLGEMSLEEHSQCEC 124
+ Y P + ++ LEEH +C C
Sbjct: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
sapiens]
Length = 837
Score = 45.8 bits (107), Expect = 3e-05
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 134 KPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGPAAA 193
+P +A TP QPR + SPA PTPAP P++ P+ T A P PAAA
Sbjct: 3 EPSQAPTPAPAAQPRPLQ---------SPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAA 53
Query: 194 AADAAAS---SVAKGGA 207
A + + V GGA
Sbjct: 54 PAGSTGTGGPGVGSGGA 70
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 44.7 bits (104), Expect = 6e-05
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 113 EMSLEEHSQCECRPKKKDSAVKPDRAATPHH----RPQPRSVPGWDSAPGA--------- 159
E + E E P++ S P A+TP P P P +AP A
Sbjct: 109 EPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLA 168
Query: 160 PSPADITHPTPAPGPSAHAAPSTTSALTPGPA-AAAADAAASSVAKGGA 207
P+PA P PAP P A AP+ A P PA A A DAA A+ GA
Sbjct: 169 PAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGA 217
Score = 37.0 bits (84), Expect = 0.012
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
Query: 138 AATPHHRPQPRSVPGWDSAP------------GAPSPADITHPTPAPGP----SAHAAPS 181
A +P P S+ G + AP P P + P PAP P + AAP
Sbjct: 103 AVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPV 162
Query: 182 TTSALTPGPAAAAADAAA 199
+ L P PA A A A A
Sbjct: 163 AVAVLAPAPAPAPAPAPA 180
Score = 36.6 bits (83), Expect = 0.015
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 132 AVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGPA 191
A P A P P +V AP AP+PA P AP P+ AP+ A P P
Sbjct: 148 APAPAPVAAPVAAPVAVAVLAPAPAP-APAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPD 206
Query: 192 AAAADAAASSVAKG 205
AA ++A +G
Sbjct: 207 AAPQESAEQGANQG 220
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 44.7 bits (104), Expect = 6e-05
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 113 EMSLEEHSQCECRPKKKDSAVKPDRAATPHH----RPQPRSVPGWDSAPGA--------- 159
E + E E P++ S P A+TP P P P +AP A
Sbjct: 109 EPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLA 168
Query: 160 PSPADITHPTPAPGPSAHAAPSTTSALTPGPA-AAAADAAASSVAKGGA 207
P+PA P PAP P A AP+ A P PA A A DAA A+ GA
Sbjct: 169 PAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGA 217
Score = 37.0 bits (84), Expect = 0.012
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
Query: 138 AATPHHRPQPRSVPGWDSAP------------GAPSPADITHPTPAPGP----SAHAAPS 181
A +P P S+ G + AP P P + P PAP P + AAP
Sbjct: 103 AVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPV 162
Query: 182 TTSALTPGPAAAAADAAA 199
+ L P PA A A A A
Sbjct: 163 AVAVLAPAPAPAPAPAPA 180
Score = 36.6 bits (83), Expect = 0.015
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 132 AVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGPA 191
A P A P P +V AP AP+PA P AP P+ AP+ A P P
Sbjct: 148 APAPAPVAAPVAAPVAVAVLAPAPAP-APAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPD 206
Query: 192 AAAADAAASSVAKG 205
AA ++A +G
Sbjct: 207 AAPQESAEQGANQG 220
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 44.7 bits (104), Expect = 6e-05
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 113 EMSLEEHSQCECRPKKKDSAVKPDRAATPHH----RPQPRSVPGWDSAPGA--------- 159
E + E E P++ S P A+TP P P P +AP A
Sbjct: 120 EPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLA 179
Query: 160 PSPADITHPTPAPGPSAHAAPSTTSALTPGPA-AAAADAAASSVAKGGA 207
P+PA P PAP P A AP+ A P PA A A DAA A+ GA
Sbjct: 180 PAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGA 228
Score = 37.0 bits (84), Expect = 0.012
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
Query: 138 AATPHHRPQPRSVPGWDSAP------------GAPSPADITHPTPAPGP----SAHAAPS 181
A +P P S+ G + AP P P + P PAP P + AAP
Sbjct: 114 AVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPV 173
Query: 182 TTSALTPGPAAAAADAAA 199
+ L P PA A A A A
Sbjct: 174 AVAVLAPAPAPAPAPAPA 191
Score = 36.6 bits (83), Expect = 0.015
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 132 AVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGPA 191
A P A P P +V AP AP+PA P AP P+ AP+ A P P
Sbjct: 159 APAPAPVAAPVAAPVAVAVLAPAPAP-APAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPD 217
Query: 192 AAAADAAASSVAKG 205
AA ++A +G
Sbjct: 218 AAPQESAEQGANQG 231
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 43.9 bits (102), Expect = 1e-04
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 104 IRYPSSQLGEMSLEEHSQCECRPKKKDSAVKPDRAATPHHRPQPRSVP--GWDSAPGAPS 161
I+ P++ GE+ + + +P++ D P A P +P P D+A
Sbjct: 1199 IKRPANS-GELDKMDEKRTRLQPEEADVPAYPKVATVPQSEKKPSKYPLCSADAAVSTTP 1257
Query: 162 PADITHPTPAPGPSAHAAPSTTSALTPGPAAAAADAAASSVA 203
P P P P P S+ P PA AA AAA+S A
Sbjct: 1258 PGSPPPPPPLPEPPVLKVLSSLKPAAPSPATAATTAAAASTA 1299
Score = 34.3 bits (77), Expect = 0.077
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 127 KKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPT------PAPGPSAHAAP 180
K K + PD A P +VP S PG S + HP P P H P
Sbjct: 884 KSKHDSSAPDPAPDSADEVMPEAVPEVASEPGLESAS---HPNVDRTYFPGPPGDGHPEP 940
Query: 181 STTSALTPGPAAAAADAAASSVAKG 205
S L+P PA+ + + G
Sbjct: 941 SPLEDLSPCPASCGSGVVTTVTVSG 965
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 41.6 bits (96), Expect = 5e-04
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 104 IRYPSSQLGEMSLEEHSQCECRPKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPA 163
++ PSS G E S+ R + P P H P P++ P AP P PA
Sbjct: 52 LQSPSSAGGHPKAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAP---PAPQPPQPA 108
Query: 164 -DITHPTPA-PGPSAHAAPSTTSALTPGPAAAAADAAASS 201
PTPA P P + A+P ++ P PA AA +S
Sbjct: 109 PQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNS 148
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 41.6 bits (96), Expect = 5e-04
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 104 IRYPSSQLGEMSLEEHSQCECRPKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPA 163
++ PSS G E S+ R + P P H P P++ P AP P PA
Sbjct: 52 LQSPSSAGGHPKAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAP---PAPQPPQPA 108
Query: 164 -DITHPTPA-PGPSAHAAPSTTSALTPGPAAAAADAAASS 201
PTPA P P + A+P ++ P PA AA +S
Sbjct: 109 PQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNS 148
>gi|9994187 platelet-derived growth factor C precursor [Homo
sapiens]
Length = 345
Score = 41.2 bits (95), Expect = 6e-04
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 46 TCQPREVVVPLTVELMGTVAKQLVPSCVTVQRCGG---CCPD--DGLECVPTGQHQVRMQ 100
+C PR V + EL T P C+ V+RCGG CC + +CVP+ + +
Sbjct: 249 SCTPRNFSVSIREELKRTDTI-FWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHE 307
Query: 101 ILMIRYPS------SQLGEMSLEEHSQCEC 124
+L +R + L +++LE H +C+C
Sbjct: 308 VLQLRPKTGVRGLHKSLTDVALEHHEECDC 337
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 40.8 bits (94), Expect = 8e-04
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGP 190
S+ P+ A P P P SAP + A T P P + +AP T+A+ P P
Sbjct: 205 SSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTP 264
Query: 191 AAAAADAAASS 201
+A D +++S
Sbjct: 265 SATTLDPSSAS 275
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSA 185
P S+ P+ A P P SAP + A T P P P + +AP T+A
Sbjct: 177 PAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTA 236
Query: 186 LTPGPAAAAADAAASS 201
P P+A +SS
Sbjct: 237 APPTPSATTPAPLSSS 252
Score = 39.7 bits (91), Expect = 0.002
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGP 190
+A P +AT P + P +AP P P+ + P AAP T SA TP P
Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAP 248
Query: 191 AAAAADAAASSV 202
+++A ++V
Sbjct: 249 LSSSAPPETTAV 260
Score = 37.7 bits (86), Expect = 0.007
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGP 190
+A P +AT P + P +AP PS P+ + P AAP T A TP P
Sbjct: 166 TAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP 225
Query: 191 AAAAA 195
+++A
Sbjct: 226 PSSSA 230
Score = 32.3 bits (72), Expect = 0.29
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 126 PKKKDSAVKPDRAATPHH----RPQPRSV---PGWDSAPGAPSPADITHPTPAPGPSAHA 178
P S+ P+ A P P P S P + P PS + + + P A
Sbjct: 223 PAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA 282
Query: 179 APSTTSALTPGPAAAAA 195
AP T SA TP P ++ A
Sbjct: 283 APPTPSATTPAPPSSPA 299
Score = 32.0 bits (71), Expect = 0.38
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPS---PADITHPTPAPGPSAHAAPSTTSALT 187
+A P AT P + P +AP PS PA ++ P P A P T SA T
Sbjct: 212 TAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAP---PETTAVPPTPSATT 268
Query: 188 PGPAAAAA 195
P++A+A
Sbjct: 269 LDPSSASA 276
Score = 31.6 bits (70), Expect = 0.50
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPA---PGPSAHAAPST 182
P S+ P+ A P P P + S+ AP PTP+ P P + AP
Sbjct: 246 PAPLSSSAPPETTAVP---PTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQE 302
Query: 183 TSA---LTP--GPAAAAADAAASSVA 203
T+A TP P A D + +S A
Sbjct: 303 TTAAPITTPNSSPTTLAPDTSETSAA 328
Score = 28.9 bits (63), Expect = 3.2
Identities = 20/72 (27%), Positives = 26/72 (36%)
Query: 130 DSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPG 189
+S D A P P SAP + A T P + +AP T+A P
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPT 217
Query: 190 PAAAAADAAASS 201
P A +SS
Sbjct: 218 PPATTPAPPSSS 229
Score = 28.5 bits (62), Expect = 4.2
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 141 PHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGPAAAAADAAA 199
P + P P+ P A +PA + P +A PS T+ P +A AA
Sbjct: 156 PVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 40.8 bits (94), Expect = 8e-04
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGP 190
S+ P+ A P P P SAP + A T P P + +AP T+A+ P P
Sbjct: 205 SSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTP 264
Query: 191 AAAAADAAASS 201
+A D +++S
Sbjct: 265 SATTLDPSSAS 275
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSA 185
P S+ P+ A P P SAP + A T P P P + +AP T+A
Sbjct: 177 PAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTA 236
Query: 186 LTPGPAAAAADAAASS 201
P P+A +SS
Sbjct: 237 APPTPSATTPAPLSSS 252
Score = 39.7 bits (91), Expect = 0.002
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGP 190
+A P +AT P + P +AP P P+ + P AAP T SA TP P
Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAP 248
Query: 191 AAAAADAAASSV 202
+++A ++V
Sbjct: 249 LSSSAPPETTAV 260
Score = 37.7 bits (86), Expect = 0.007
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGP 190
+A P +AT P + P +AP PS P+ + P AAP T A TP P
Sbjct: 166 TAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP 225
Query: 191 AAAAA 195
+++A
Sbjct: 226 PSSSA 230
Score = 32.3 bits (72), Expect = 0.29
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 126 PKKKDSAVKPDRAATPHH----RPQPRSV---PGWDSAPGAPSPADITHPTPAPGPSAHA 178
P S+ P+ A P P P S P + P PS + + + P A
Sbjct: 223 PAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA 282
Query: 179 APSTTSALTPGPAAAAA 195
AP T SA TP P ++ A
Sbjct: 283 APPTPSATTPAPPSSPA 299
Score = 32.0 bits (71), Expect = 0.38
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPS---PADITHPTPAPGPSAHAAPSTTSALT 187
+A P AT P + P +AP PS PA ++ P P A P T SA T
Sbjct: 212 TAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAP---PETTAVPPTPSATT 268
Query: 188 PGPAAAAA 195
P++A+A
Sbjct: 269 LDPSSASA 276
Score = 31.6 bits (70), Expect = 0.50
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPA---PGPSAHAAPST 182
P S+ P+ A P P P + S+ AP PTP+ P P + AP
Sbjct: 246 PAPLSSSAPPETTAVP---PTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQE 302
Query: 183 TSA---LTP--GPAAAAADAAASSVA 203
T+A TP P A D + +S A
Sbjct: 303 TTAAPITTPNSSPTTLAPDTSETSAA 328
Score = 28.9 bits (63), Expect = 3.2
Identities = 20/72 (27%), Positives = 26/72 (36%)
Query: 130 DSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPG 189
+S D A P P SAP + A T P + +AP T+A P
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPT 217
Query: 190 PAAAAADAAASS 201
P A +SS
Sbjct: 218 PPATTPAPPSSS 229
Score = 28.5 bits (62), Expect = 4.2
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 141 PHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGPAAAAADAAA 199
P + P P+ P A +PA + P +A PS T+ P +A AA
Sbjct: 156 PVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 40.8 bits (94), Expect = 8e-04
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGP 190
S+ P+ A P P P SAP + A T P P + +AP T+A+ P P
Sbjct: 205 SSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTP 264
Query: 191 AAAAADAAASS 201
+A D +++S
Sbjct: 265 SATTLDPSSAS 275
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSA 185
P S+ P+ A P P SAP + A T P P P + +AP T+A
Sbjct: 177 PAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTA 236
Query: 186 LTPGPAAAAADAAASS 201
P P+A +SS
Sbjct: 237 APPTPSATTPAPLSSS 252
Score = 39.7 bits (91), Expect = 0.002
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGP 190
+A P +AT P + P +AP P P+ + P AAP T SA TP P
Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAP 248
Query: 191 AAAAADAAASSV 202
+++A ++V
Sbjct: 249 LSSSAPPETTAV 260
Score = 37.7 bits (86), Expect = 0.007
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGP 190
+A P +AT P + P +AP PS P+ + P AAP T A TP P
Sbjct: 166 TAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP 225
Query: 191 AAAAA 195
+++A
Sbjct: 226 PSSSA 230
Score = 32.3 bits (72), Expect = 0.29
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 126 PKKKDSAVKPDRAATPHH----RPQPRSV---PGWDSAPGAPSPADITHPTPAPGPSAHA 178
P S+ P+ A P P P S P + P PS + + + P A
Sbjct: 223 PAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA 282
Query: 179 APSTTSALTPGPAAAAA 195
AP T SA TP P ++ A
Sbjct: 283 APPTPSATTPAPPSSPA 299
Score = 32.0 bits (71), Expect = 0.38
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPS---PADITHPTPAPGPSAHAAPSTTSALT 187
+A P AT P + P +AP PS PA ++ P P A P T SA T
Sbjct: 212 TAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAP---PETTAVPPTPSATT 268
Query: 188 PGPAAAAA 195
P++A+A
Sbjct: 269 LDPSSASA 276
Score = 31.6 bits (70), Expect = 0.50
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPA---PGPSAHAAPST 182
P S+ P+ A P P P + S+ AP PTP+ P P + AP
Sbjct: 246 PAPLSSSAPPETTAVP---PTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQE 302
Query: 183 TSA---LTP--GPAAAAADAAASSVA 203
T+A TP P A D + +S A
Sbjct: 303 TTAAPITTPNSSPTTLAPDTSETSAA 328
Score = 28.9 bits (63), Expect = 3.2
Identities = 20/72 (27%), Positives = 26/72 (36%)
Query: 130 DSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPG 189
+S D A P P SAP + A T P + +AP T+A P
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPT 217
Query: 190 PAAAAADAAASS 201
P A +SS
Sbjct: 218 PPATTPAPPSSS 229
Score = 28.5 bits (62), Expect = 4.2
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 141 PHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGPAAAAADAAA 199
P + P P+ P A +PA + P +A PS T+ P +A AA
Sbjct: 156 PVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 40.0 bits (92), Expect = 0.001
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 138 AATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTP---GPAAAA 194
AATP P P+ P S GAP+P T P+P GP A PS A TP P +
Sbjct: 967 AATP---PSPKGGPATPSPKGAPTPPAATPPSPKGGP---ATPSPKGAPTPPAVTPPSPK 1020
Query: 195 ADAAASSVAKGGA 207
AA+ KG +
Sbjct: 1021 GSPAATPFPKGAS 1033
Score = 39.7 bits (91), Expect = 0.002
Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPG---PSAHAAPST 182
P K + P AATP P P+ P S GAP P T P+P G P AP+T
Sbjct: 1074 PSLKGAPTPP--AATP---PSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTT 1128
Query: 183 TSALTPGPAAAAA 195
+A P P A
Sbjct: 1129 PAATPPSPKGGLA 1141
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTS- 184
P K + P AATP P P+ P S GAP+P +T P+P P+A P S
Sbjct: 980 PSPKGAPTPP--AATP---PSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAST 1034
Query: 185 -------------ALTPGPAAAAADAAASSVA-KGG 206
A TP P A AA+ + KGG
Sbjct: 1035 PPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGG 1070
Score = 38.5 bits (88), Expect = 0.004
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 138 AATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALTPGPAAAAA-- 195
AATP P P+ PG GAP+P +T P+P P+ P+TT + GP ++
Sbjct: 1314 AATP---PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPT---LPATTPSSKGGPTTPSSKE 1367
Query: 196 ---DAAASSVAKGG 206
AA+ KGG
Sbjct: 1368 GPTPPAATPSHKGG 1381
Score = 38.1 bits (87), Expect = 0.005
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 145 PQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHA---APSTTSALTPGPAAAAA 195
P P+ +P S GAP+P T P+P GP+ + AP+ +A P P A
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPA 978
Score = 37.7 bits (86), Expect = 0.007
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGP---SAHAAPST 182
P K + P AATP P P+ P S AP+P T P+P GP S AP+
Sbjct: 934 PSPKGAPTPP--AATP---PSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTP 988
Query: 183 TSALTPGPAAAAA 195
+A P P A
Sbjct: 989 PAATPPSPKGGPA 1001
Score = 37.7 bits (86), Expect = 0.007
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 13/81 (16%)
Query: 139 ATPHHR----------PQPRSVPGWDSAPGAPSPADITHPTP--APG-PSAHAAPSTTSA 185
ATP H+ P P+ P GAP+P T P+P +PG P AP+ +
Sbjct: 1279 ATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAV 1338
Query: 186 LTPGPAAAAADAAASSVAKGG 206
P P A + +KGG
Sbjct: 1339 TPPSPKGTPTLPATTPSSKGG 1359
Score = 36.6 bits (83), Expect = 0.015
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 145 PQPRSVPGWDSAPGAPSPADITHPTPAPG---PSAHAAPSTTSALTPGPAAAAA 195
P P+ P S GAP+P T P+P G PS AP +A P P A
Sbjct: 1065 PSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLA 1118
Score = 36.6 bits (83), Expect = 0.015
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAP--GAPSPADITHPTPAPGPSA---HAAP 180
PK + P A TP P G + P GAP+PA +T P+P GP+ AP
Sbjct: 1251 PKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAP 1310
Query: 181 STTSALTPGP 190
+ +A P P
Sbjct: 1311 TPPAATPPSP 1320
Score = 36.2 bits (82), Expect = 0.020
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPG---PSAHAAPST 182
P K + P AATP P P+ S GAP+ T P+P G PS AP+T
Sbjct: 1189 PSPKGAPTTP--AATP---PSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1243
Query: 183 TSALTPGPAAAAA 195
+A P P A
Sbjct: 1244 PAATPPSPKGGPA 1256
Score = 35.8 bits (81), Expect = 0.026
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPG---PSAHAAPST 182
P K + P AATP P P+ S GAP+ T P+P G PS AP+T
Sbjct: 1166 PPPKGAPTTP--AATP---PSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1220
Query: 183 TSALTPGPAAAAA 195
+A P P A
Sbjct: 1221 PAATPPSPKGGLA 1233
Score = 33.9 bits (76), Expect = 0.100
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPG---PSAHAAPST 182
P K + P AATP P P+ GAP+ T P+P G PS AP+T
Sbjct: 1143 PPPKGAPTTP--AATP---PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1197
Query: 183 TSALTPGPAAAAA 195
+A P P A
Sbjct: 1198 PAATPPSPKGGLA 1210
Score = 32.3 bits (72), Expect = 0.29
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPG---PSAHAAPST 182
P K + + P AATP P P+ GAP+ T P+P G P AP+T
Sbjct: 1097 PSPKGAPMPP--AATP---PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTT 1151
Query: 183 TSALTPGPAAAAA 195
+A P P A
Sbjct: 1152 PAATPPSPKGGLA 1164
Score = 32.3 bits (72), Expect = 0.29
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 126 PKKKDSAVKPDRAATPHH---RPQPRS--VPGWDSAPG---APSPADITHPTPAPGPSAH 177
P K+++ P A TP P P+ +P ++P AP+P +T P+P GP+
Sbjct: 1574 PSSKEASSPP--AVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATP 1631
Query: 178 AAPSTTSA--LTPGPAAAAADAAASSVAKGGA 207
A T ++ +TP + + AS K GA
Sbjct: 1632 APKGTPTSPPVTPSSLKDSPTSPASVTCKMGA 1663
Score = 32.0 bits (71), Expect = 0.38
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPG---PSAHAAPST 182
P K + P AATP P P+ GAP+ T P+P G P AP+T
Sbjct: 1120 PPHKGAPTTP--AATP---PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTT 1174
Query: 183 TSALTPGPAAAAA 195
+A P P A
Sbjct: 1175 PAATPPSPKGGLA 1187
Score = 32.0 bits (71), Expect = 0.38
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAP--GAPSPADITHPTPAPGPSAHAAPSTT 183
PKK + P A + S P + GAPSP ++ P PS AP+
Sbjct: 1558 PKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPP 1617
Query: 184 SALTPGPAAAAADAA 198
+ P P A A
Sbjct: 1618 AVTPPSPEKGPATPA 1632
Score = 30.4 bits (67), Expect = 1.1
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 126 PKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPG---PSAHAAPST 182
P K + P AATP P P+ P GAP+P T P+ G P AP+
Sbjct: 1235 PSPKGAPTTP--AATP---PSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNP 1289
Query: 183 TSALTPGPAAAAA 195
P P A
Sbjct: 1290 AVVTPPSPKGGPA 1302
Score = 28.5 bits (62), Expect = 4.2
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 133 VKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPT----PAPGPSAHAAPSTTSALTP 188
+ D ++T P RSV P PS ++ T P PS PST S++T
Sbjct: 339 ISVDHSSTGASYPSQRSV-----IPPLPSRNEVVPATVAAFPVVAPSVDKGPSTISSITC 393
Query: 189 GPAAAAADAAASSVA 203
P+ + A + S++
Sbjct: 394 SPSGSLNVATSFSLS 408
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 39.7 bits (91), Expect = 0.002
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 93 GQHQVRMQILMIRYPSSQLGEMSLEEHSQCECRP-----KKKDSAVKPDRAATPHHRPQP 147
G+HQV + L+ S++ ++ + RP + + PD + TP RP P
Sbjct: 396 GEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPP 455
Query: 148 RSVPGWDSA---PGAPSPADITHPTPAPGPSAHAAPSTTSAL--TPGPAAAAADAAASS 201
+ PG PG P P P+ PS+ ++ S++S+ PG DA +SS
Sbjct: 456 QGGPGQPQGMQPPGKVLPPRRLPPGPSLPPSSSSSSSSSSSAPQRPGGPTTHGDAPSSS 514
Score = 35.0 bits (79), Expect = 0.045
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 135 PDRAATPHHRPQPRSVPGWDS-APGAPSPADITHPTPAPGPSAHAAPSTTSALTPGPAAA 193
P+ T RP+P+ P PGA S A PT +PGP P++ A P P +
Sbjct: 19 PNGYMTDLQRPEPQQPPPPPPPGPGAAS-ASAAPPTASPGPERRPPPASAPAPQPAPTPS 77
Query: 194 AADAAASSVAK 204
+ SS+++
Sbjct: 78 VGSSFFSSLSQ 88
Score = 31.6 bits (70), Expect = 0.50
Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 20/77 (25%)
Query: 131 SAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPS-----AHAAPSTTSA 185
SA P + P RP P S P AP PA PTP+ G S + A T ++
Sbjct: 48 SAAPPTASPGPERRPPPASAP-------APQPA----PTPSVGSSFFSSLSQAVKQTAAS 96
Query: 186 L----TPGPAAAAADAA 198
P PA AAA A
Sbjct: 97 AGLVDAPAPAPAAARKA 113
Score = 28.5 bits (62), Expect = 4.2
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 145 PQPRSVPGWDSAPGAP---SPADITHPTPAPGPSAHAA--PSTTSALTPGPAAAAADAAA 199
P P PG SA AP SP P PA P+ A PS S+ + A AA
Sbjct: 36 PPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAA 95
Query: 200 SS 201
S+
Sbjct: 96 SA 97
>gi|195963410 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 1 [Homo sapiens]
Length = 415
Score = 39.3 bits (90), Expect = 0.002
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 96 QVRMQILMIRYPSSQLGEMSLEEHSQCECRPKKKDSAVKPDRAATPHHRPQPRSVPGWDS 155
++R Q+ + P S M LE + P+++ KP R +P P PR P +
Sbjct: 179 ELRQQLRLRGLPVSGTKSMLLER-MRGGAPPRERP---KPRREDSPAGAPWPRLKPKALA 234
Query: 156 AP---GAPSPADITHPTPAPGPSAHAAPSTTSALTPGPAAAAADAAASSVAKGGA 207
A G+ P+ +H P P A P T A TP PA AAA A S G A
Sbjct: 235 AARRQGSVKPSAASHRPPLP--RAADTPGTAPAPTPTPAPAAAPALTPSSGPGSA 287
Score = 35.0 bits (79), Expect = 0.045
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 128 KKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALT 187
++ +VKP A+ H P PR+ PG T P P P P+ AAP+ T +
Sbjct: 237 RRQGSVKPSAAS--HRPPLPRAA----DTPG-------TAPAPTPTPAPAAAPALTPSSG 283
Query: 188 PGPAA 192
PG AA
Sbjct: 284 PGSAA 288
>gi|32698970 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 2 [Homo sapiens]
Length = 312
Score = 39.3 bits (90), Expect = 0.002
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 96 QVRMQILMIRYPSSQLGEMSLEEHSQCECRPKKKDSAVKPDRAATPHHRPQPRSVPGWDS 155
++R Q+ + P S M LE + P+++ KP R +P P PR P +
Sbjct: 76 ELRQQLRLRGLPVSGTKSMLLER-MRGGAPPRERP---KPRREDSPAGAPWPRLKPKALA 131
Query: 156 AP---GAPSPADITHPTPAPGPSAHAAPSTTSALTPGPAAAAADAAASSVAKGGA 207
A G+ P+ +H P P A P T A TP PA AAA A S G A
Sbjct: 132 AARRQGSVKPSAASHRPPLP--RAADTPGTAPAPTPTPAPAAAPALTPSSGPGSA 184
Score = 35.0 bits (79), Expect = 0.045
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 128 KKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPSTTSALT 187
++ +VKP A+ H P PR+ PG T P P P P+ AAP+ T +
Sbjct: 134 RRQGSVKPSAAS--HRPPLPRAA----DTPG-------TAPAPTPTPAPAAAPALTPSSG 180
Query: 188 PGPAA 192
PG AA
Sbjct: 181 PGSAA 185
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,586,787
Number of Sequences: 37866
Number of extensions: 657596
Number of successful extensions: 11576
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 682
Number of HSP's that attempted gapping in prelim test: 6981
Number of HSP's gapped (non-prelim): 4356
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.