Guide to the Human Genome
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Name: PTGER3 Sequence: fasta or formatted (393aa) NCBI GI: 38505176
Description:

prostaglandin E receptor 3, subtype EP3 isoform 3

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [425aa] prostaglandin E receptor 3, subtype EP3 isoform 1
alt prot [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [388aa] prostaglandin E receptor 3, subtype EP3 isoform 5
alt prot [374aa] prostaglandin E receptor 3, subtype EP3 isoform 6
alt prot [365aa] prostaglandin E receptor 3, subtype EP3 isoform 7
alt prot [418aa] prostaglandin E receptor 3, subtype EP3 isoform 8
alt prot [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [402aa] prostaglandin E receptor 3, subtype EP3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         34           1
 C cysteine            4.1         16           1
 D aspartate           1.8          7           1
 E glutamate           3.3         13           1
 F phenylalanine       5.1         20           2
 G glycine             7.4         29           2
 H histidine           2.3          9           1
 I isoleucine          4.1         16           1
 K lysine              3.6         14           2
 L leucine            12.5         49           3
 M methionine          3.3         13           2
 N asparagine          2.5         10           1
 P proline             3.8         15           2
 Q glutamine           3.3         13           1
 R arginine            6.9         27           3
 S serine              8.4         33           3
 T threonine           7.4         29           2
 V valine              6.6         26           2
 W tryptophan          3.3         13           1
 Y tyrosine            1.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prostaglandin E receptor 3, subtype EP3 isoform 3 [H... 
PTGER3                0.990   prostaglandin E receptor 3, subtype EP3 isoform 2 [H...
PTGER3                0.900   prostaglandin E receptor 3, subtype EP3 isoform 7 [H...
PTGER3                0.900   prostaglandin E receptor 3, subtype EP3 isoform 1 [H...
PTGER3                0.898   prostaglandin E receptor 3, subtype EP3 isoform 5 [H...
PTGER3                0.898   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.898   prostaglandin E receptor 3, subtype EP3 isoform 8 [H...
PTGER3                0.898   prostaglandin E receptor 3, subtype EP3 isoform 6 [H...
PTGER3                0.898   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.898   prostaglandin E receptor 3, subtype EP3 isoform 4 [...
PTGFR                 0.220   prostaglandin F receptor isoform a precursor 
TBXA2R                0.194   thromboxane A2 receptor 
PTGER1                0.176   prostaglandin E receptor 1, subtype EP1 
PTGFR                 0.172   prostaglandin F receptor isoform b precursor 
PTGIR                 0.137   prostaglandin I2 (prostacyclin) receptor (IP) 
PTGER4                0.134   prostaglandin E receptor 4, subtype EP4 
PTGER2                0.134   prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom...
PTGDR                 0.103   prostaglandin D2 receptor 
OPN4                  0.046   opsin 4 isoform 1 
OPN4                  0.042   opsin 4 isoform 2 
RRH                   0.038   peropsin 
SSTR1                 0.036   somatostatin receptor 1 
GPR152                0.036   G protein-coupled receptor 152 
SSTR2                 0.034   somatostatin receptor 2 
SSTR4                 0.034   somatostatin receptor 4 
GPR61                 0.034   G protein-coupled receptor 61 
OR4S2                 0.032   olfactory receptor, family 4, subfamily S, member 2...
MC2R                  0.031   melanocortin 2 receptor 
GPR17                 0.031   G protein-coupled receptor 17 isoform a 
GPR17                 0.031   G protein-coupled receptor 17 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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