Guide to the Human Genome
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Name: PTGER3 Sequence: fasta or formatted (402aa) NCBI GI: 89276764
Description:

prostaglandin E receptor 3, subtype EP3 isoform 2

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [425aa] prostaglandin E receptor 3, subtype EP3 isoform 1
alt prot [393aa] prostaglandin E receptor 3, subtype EP3 isoform 3
alt prot [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [388aa] prostaglandin E receptor 3, subtype EP3 isoform 5
alt prot [374aa] prostaglandin E receptor 3, subtype EP3 isoform 6
alt prot [365aa] prostaglandin E receptor 3, subtype EP3 isoform 7
alt prot [418aa] prostaglandin E receptor 3, subtype EP3 isoform 8
alt prot [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         34           1
 C cysteine            4.0         16           1
 D aspartate           1.7          7           1
 E glutamate           3.5         14           1
 F phenylalanine       5.0         20           2
 G glycine             7.2         29           2
 H histidine           2.2          9           1
 I isoleucine          4.0         16           1
 K lysine              3.7         15           2
 L leucine            12.4         50           3
 M methionine          3.5         14           2
 N asparagine          2.5         10           1
 P proline             3.7         15           2
 Q glutamine           3.5         14           1
 R arginine            7.7         31           3
 S serine              8.2         33           3
 T threonine           7.2         29           2
 V valine              6.5         26           2
 W tryptophan          3.2         13           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prostaglandin E receptor 3, subtype EP3 isoform 2 [H... 
PTGER3                0.969   prostaglandin E receptor 3, subtype EP3 isoform 3 [H...
PTGER3                0.904   prostaglandin E receptor 3, subtype EP3 isoform 1 [H...
PTGER3                0.902   prostaglandin E receptor 3, subtype EP3 isoform 6 [H...
PTGER3                0.900   prostaglandin E receptor 3, subtype EP3 isoform 8 [H...
PTGER3                0.881   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.881   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.881   prostaglandin E receptor 3, subtype EP3 isoform 4 [...
PTGER3                0.879   prostaglandin E receptor 3, subtype EP3 isoform 5 [H...
PTGER3                0.879   prostaglandin E receptor 3, subtype EP3 isoform 7 [H...
PTGFR                 0.215   prostaglandin F receptor isoform a precursor 
TBXA2R                0.193   thromboxane A2 receptor 
PTGER1                0.171   prostaglandin E receptor 1, subtype EP1 
PTGFR                 0.169   prostaglandin F receptor isoform b precursor 
PTGER2                0.131   prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom...
PTGER4                0.131   prostaglandin E receptor 4, subtype EP4 
PTGIR                 0.129   prostaglandin I2 (prostacyclin) receptor (IP) 
PTGDR                 0.101   prostaglandin D2 receptor 
OPN4                  0.045   opsin 4 isoform 1 
OPN4                  0.041   opsin 4 isoform 2 
RRH                   0.039   peropsin 
GPR152                0.035   G protein-coupled receptor 152 
SSTR1                 0.034   somatostatin receptor 1 
SSTR2                 0.034   somatostatin receptor 2 
SSTR4                 0.034   somatostatin receptor 4 
GPR61                 0.034   G protein-coupled receptor 61 
GPR34                 0.033   G protein-coupled receptor 34 
GPR34                 0.033   G protein-coupled receptor 34 
OPRK1                 0.033   opioid receptor, kappa 1 
CYSLTR1               0.031   cysteinyl leukotriene receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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