Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PTGER3 Sequence: fasta or formatted (374aa) NCBI GI: 38505182
Description:

prostaglandin E receptor 3, subtype EP3 isoform 6

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [425aa] prostaglandin E receptor 3, subtype EP3 isoform 1
alt prot [393aa] prostaglandin E receptor 3, subtype EP3 isoform 3
alt prot [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [388aa] prostaglandin E receptor 3, subtype EP3 isoform 5
alt prot [365aa] prostaglandin E receptor 3, subtype EP3 isoform 7
alt prot [418aa] prostaglandin E receptor 3, subtype EP3 isoform 8
alt prot [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [402aa] prostaglandin E receptor 3, subtype EP3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         33           1
 C cysteine            3.2         12           1
 D aspartate           1.3          5           1
 E glutamate           3.7         14           2
 F phenylalanine       5.3         20           2
 G glycine             7.5         28           2
 H histidine           1.9          7           1
 I isoleucine          4.3         16           1
 K lysine              4.0         15           2
 L leucine            13.1         49           3
 M methionine          3.5         13           2
 N asparagine          2.9         11           1
 P proline             3.2         12           2
 Q glutamine           3.2         12           1
 R arginine            7.2         27           3
 S serine              7.8         29           3
 T threonine           7.5         28           2
 V valine              6.4         24           2
 W tryptophan          3.2         12           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prostaglandin E receptor 3, subtype EP3 isoform 6 [H... 
PTGER3                0.982   prostaglandin E receptor 3, subtype EP3 isoform 2 [H...
PTGER3                0.980   prostaglandin E receptor 3, subtype EP3 isoform 8 [H...
PTGER3                0.980   prostaglandin E receptor 3, subtype EP3 isoform 1 [H...
PTGER3                0.966   prostaglandin E receptor 3, subtype EP3 isoform 7 [H...
PTGER3                0.959   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.959   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.959   prostaglandin E receptor 3, subtype EP3 isoform 4 [...
PTGER3                0.956   prostaglandin E receptor 3, subtype EP3 isoform 5 [H...
PTGER3                0.956   prostaglandin E receptor 3, subtype EP3 isoform 3 [H...
PTGFR                 0.234   prostaglandin F receptor isoform a precursor 
TBXA2R                0.207   thromboxane A2 receptor 
PTGER1                0.186   prostaglandin E receptor 1, subtype EP1 
PTGFR                 0.184   prostaglandin F receptor isoform b precursor 
PTGER2                0.143   prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom...
PTGER4                0.143   prostaglandin E receptor 4, subtype EP4 
PTGIR                 0.140   prostaglandin I2 (prostacyclin) receptor (IP) 
PTGDR                 0.110   prostaglandin D2 receptor 
OPN4                  0.049   opsin 4 isoform 1 
OPN4                  0.045   opsin 4 isoform 2 
RRH                   0.042   peropsin 
GPR152                0.038   G protein-coupled receptor 152 
SSTR1                 0.037   somatostatin receptor 1 
SSTR2                 0.037   somatostatin receptor 2 
SSTR4                 0.037   somatostatin receptor 4 
GPR61                 0.037   G protein-coupled receptor 61 
GPR34                 0.035   G protein-coupled receptor 34 
GPR34                 0.035   G protein-coupled receptor 34 
OPRK1                 0.035   opioid receptor, kappa 1 
CYSLTR1               0.034   cysteinyl leukotriene receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press