Guide to the Human Genome
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Name: PTGER3 Sequence: fasta or formatted (390aa) NCBI GI: 186659506
Description:

prostaglandin E receptor 3, subtype EP3 isoform 4

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [425aa] prostaglandin E receptor 3, subtype EP3 isoform 1
alt prot [393aa] prostaglandin E receptor 3, subtype EP3 isoform 3
alt mRNA [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [388aa] prostaglandin E receptor 3, subtype EP3 isoform 5
alt prot [374aa] prostaglandin E receptor 3, subtype EP3 isoform 6
alt prot [365aa] prostaglandin E receptor 3, subtype EP3 isoform 7
alt prot [418aa] prostaglandin E receptor 3, subtype EP3 isoform 8
alt mRNA [390aa] prostaglandin E receptor 3, subtype EP3 isoform 4
alt prot [402aa] prostaglandin E receptor 3, subtype EP3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         34           1
 C cysteine            3.6         14           1
 D aspartate           1.5          6           1
 E glutamate           3.1         12           1
 F phenylalanine       4.9         19           2
 G glycine             6.9         27           2
 H histidine           2.3          9           1
 I isoleucine          4.4         17           1
 K lysine              3.6         14           2
 L leucine            13.1         51           3
 M methionine          3.3         13           2
 N asparagine          3.1         12           2
 P proline             3.3         13           2
 Q glutamine           3.1         12           1
 R arginine            6.4         25           3
 S serine              9.2         36           3
 T threonine           7.9         31           2
 V valine              6.2         24           2
 W tryptophan          3.1         12           1
 Y tyrosine            2.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prostaglandin E receptor 3, subtype EP3 isoform 4 [... 
PTGER3                1.000   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                1.000   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.917   prostaglandin E receptor 3, subtype EP3 isoform 2 [H...
PTGER3                0.917   prostaglandin E receptor 3, subtype EP3 isoform 8 [H...
PTGER3                0.917   prostaglandin E receptor 3, subtype EP3 isoform 6 [H...
PTGER3                0.917   prostaglandin E receptor 3, subtype EP3 isoform 1 [H...
PTGER3                0.915   prostaglandin E receptor 3, subtype EP3 isoform 5 [H...
PTGER3                0.915   prostaglandin E receptor 3, subtype EP3 isoform 7 [H...
PTGER3                0.914   prostaglandin E receptor 3, subtype EP3 isoform 3 [H...
PTGFR                 0.224   prostaglandin F receptor isoform a precursor 
TBXA2R                0.198   thromboxane A2 receptor 
PTGER1                0.178   prostaglandin E receptor 1, subtype EP1 
PTGFR                 0.176   prostaglandin F receptor isoform b precursor 
PTGER2                0.140   prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom...
PTGER4                0.137   prostaglandin E receptor 4, subtype EP4 
PTGIR                 0.134   prostaglandin I2 (prostacyclin) receptor (IP) 
PTGDR                 0.105   prostaglandin D2 receptor 
OPN4                  0.047   opsin 4 isoform 1 
OPN4                  0.043   opsin 4 isoform 2 
RRH                   0.039   peropsin 
SSTR1                 0.036   somatostatin receptor 1 
GPR152                0.036   G protein-coupled receptor 152 
SSTR2                 0.035   somatostatin receptor 2 
SSTR4                 0.035   somatostatin receptor 4 
GPR61                 0.035   G protein-coupled receptor 61 
CYSLTR1               0.033   cysteinyl leukotriene receptor 1 
GPR34                 0.033   G protein-coupled receptor 34 
GPR34                 0.033   G protein-coupled receptor 34 
OR4S2                 0.033   olfactory receptor, family 4, subfamily S, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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