Guide to the Human Genome
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Name: CCBL2 Sequence: fasta or formatted (420aa) NCBI GI: 56713256
Description:

kynurenine aminotransferase III isoform 2

Referenced in:

Amino Acid Catabolism

Other entries for this name:
alt prot [454aa] kynurenine aminotransferase III isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         24           2
 C cysteine            1.7          7           1
 D aspartate           6.0         25           2
 E glutamate           6.2         26           2
 F phenylalanine       4.5         19           1
 G glycine             5.0         21           2
 H histidine           1.4          6           1
 I isoleucine          7.6         32           2
 K lysine              8.8         37           2
 L leucine             9.3         39           2
 M methionine          1.9          8           1
 N asparagine          4.0         17           2
 P proline             5.5         23           2
 Q glutamine           3.3         14           2
 R arginine            2.9         12           1
 S serine              7.6         32           3
 T threonine           5.5         23           1
 V valine              6.4         27           2
 W tryptophan          2.4         10           1
 Y tyrosine            4.3         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kynurenine aminotransferase III isoform 2 
CCBL2                 1.000   kynurenine aminotransferase III isoform 1 
CCBL1                 0.529   kynurenine aminotransferase I isoform a 
CCBL1                 0.529   kynurenine aminotransferase I isoform a 
CCBL1                 0.439   kynurenine aminotransferase I isoform b 
TAT                   0.065   tyrosine aminotransferase 
AADAT                 0.035   kynurenine aminotransferase II 
AADAT                 0.035   kynurenine aminotransferase II 
ACCS                  0.035   1-aminocyclopropane-1-carboxylate synthase homolog ...
ACCS                  0.035   1-aminocyclopropane-1-carboxylate synthase homolog [...
ACCSL                 0.030   1-aminocyclopropane-1-carboxylate synthase homolog ...
GPT                   0.019   glutamic pyruvate transaminase 
GPT2                  0.018   glutamic pyruvate transaminase 2 isoform 2 
GPT2                  0.018   glutamic pyruvate transaminase 2 isoform 1 
NCOA7                 0.008   nuclear receptor coactivator 7 isoform 2 
TTN                   0.006   titin isoform N2-A 
TTN                   0.006   titin isoform novex-2 
TTN                   0.006   titin isoform novex-1 
TTN                   0.006   titin isoform N2-B 
TPK1                  0.005   thiamin pyrophosphokinase 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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