Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GPT2 Sequence: fasta or formatted (423aa) NCBI GI: 215599424
Description:

glutamic pyruvate transaminase 2 isoform 2

Referenced in:

Amino Acid Catabolism
Amino Acid Biosynthesis and Selected Derivatives
Proteins Measured in Common Diagnostic Tests

Other entries for this name:
alt prot [523aa] glutamic pyruvate transaminase 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         31           2
 C cysteine            3.1         13           1
 D aspartate           4.5         19           1
 E glutamate           6.9         29           2
 F phenylalanine       4.0         17           1
 G glycine             7.6         32           3
 H histidine           2.1          9           1
 I isoleucine          5.9         25           2
 K lysine              5.7         24           2
 L leucine             8.5         36           2
 M methionine          2.8         12           1
 N asparagine          4.3         18           1
 P proline             6.4         27           2
 Q glutamine           4.7         20           2
 R arginine            4.3         18           2
 S serine              6.1         26           2
 T threonine           3.3         14           2
 V valine              7.6         32           2
 W tryptophan          0.5          2           1
 Y tyrosine            4.5         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamic pyruvate transaminase 2 isoform 2 
GPT2                  1.000   glutamic pyruvate transaminase 2 isoform 1 
GPT                   0.713   glutamic pyruvate transaminase 
TAT                   0.068   tyrosine aminotransferase 
ACCS                  0.044   1-aminocyclopropane-1-carboxylate synthase homolog ...
ACCS                  0.044   1-aminocyclopropane-1-carboxylate synthase homolog [...
ACCSL                 0.036   1-aminocyclopropane-1-carboxylate synthase homolog ...
CCBL2                 0.018   kynurenine aminotransferase III isoform 1 
CCBL2                 0.018   kynurenine aminotransferase III isoform 2 
CCBL1                 0.015   kynurenine aminotransferase I isoform a 
CCBL1                 0.015   kynurenine aminotransferase I isoform a 
CCBL1                 0.012   kynurenine aminotransferase I isoform b 
ACOT2                 0.006   acyl-CoA thioesterase 2 
ACOT1                 0.006   acyl-CoA thioesterase 1 
UACA                  0.006   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.006   uveal autoantigen with coiled-coil domains and ankyr...
RASAL2                0.006   RAS protein activator like 2 isoform 2 
RASAL2                0.006   RAS protein activator like 2 isoform 1 
LOC100130097          0.005   PREDICTED: similar to Kinesin-Like Protein family m...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press