Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACCS Sequence: fasta or formatted (501aa) NCBI GI: 14211921
Description:

1-aminocyclopropane-1-carboxylate synthase homolog

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt mRNA [501aa] 1-aminocyclopropane-1-carboxylate synthase homolog
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         28           2
 C cysteine            2.0         10           1
 D aspartate           5.4         27           1
 E glutamate           7.4         37           3
 F phenylalanine       4.8         24           2
 G glycine             6.8         34           2
 H histidine           2.4         12           1
 I isoleucine          2.6         13           2
 K lysine              4.2         21           1
 L leucine            12.6         63           2
 M methionine          2.6         13           1
 N asparagine          2.2         11           1
 P proline             5.0         25           1
 Q glutamine           4.8         24           2
 R arginine            7.2         36           2
 S serine              7.6         38           2
 T threonine           4.0         20           2
 V valine              7.0         35           3
 W tryptophan          1.8          9           1
 Y tyrosine            4.2         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   1-aminocyclopropane-1-carboxylate synthase homolog [... 
ACCS                  1.000   1-aminocyclopropane-1-carboxylate synthase homolog ...
ACCSL                 0.473   1-aminocyclopropane-1-carboxylate synthase homolog ...
GPT                   0.042   glutamic pyruvate transaminase 
GPT2                  0.037   glutamic pyruvate transaminase 2 isoform 2 
GPT2                  0.037   glutamic pyruvate transaminase 2 isoform 1 
TAT                   0.034   tyrosine aminotransferase 
CCBL2                 0.029   kynurenine aminotransferase III isoform 1 
CCBL2                 0.029   kynurenine aminotransferase III isoform 2 
CCBL1                 0.027   kynurenine aminotransferase I isoform a 
CCBL1                 0.027   kynurenine aminotransferase I isoform a 
CCBL1                 0.024   kynurenine aminotransferase I isoform b 
RGS9                  0.007   regulator of G-protein signaling 9 isoform 2 
RGS9                  0.007   regulator of G-protein signaling 9 isoform 1 
ARAP3                 0.006   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press