Guide to the Human Genome
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Name: ACCSL Sequence: fasta or formatted (568aa) NCBI GI: 149944424
Description:

1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         31           2
 C cysteine            3.0         17           2
 D aspartate           5.3         30           1
 E glutamate           7.4         42           3
 F phenylalanine       4.6         26           1
 G glycine             4.9         28           2
 H histidine           3.0         17           1
 I isoleucine          4.9         28           2
 K lysine              4.6         26           2
 L leucine            13.2         75           3
 M methionine          2.3         13           1
 N asparagine          3.5         20           1
 P proline             4.6         26           1
 Q glutamine           4.6         26           2
 R arginine            6.5         37           2
 S serine              7.0         40           2
 T threonine           4.6         26           1
 V valine              5.5         31           3
 W tryptophan          0.9          5           1
 Y tyrosine            4.2         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   1-aminocyclopropane-1-carboxylate synthase homolog ... 
ACCS                  0.418   1-aminocyclopropane-1-carboxylate synthase homolog ...
ACCS                  0.418   1-aminocyclopropane-1-carboxylate synthase homolog [...
TAT                   0.033   tyrosine aminotransferase 
GPT                   0.027   glutamic pyruvate transaminase 
GPT2                  0.027   glutamic pyruvate transaminase 2 isoform 2 
GPT2                  0.027   glutamic pyruvate transaminase 2 isoform 1 
CCBL1                 0.023   kynurenine aminotransferase I isoform a 
CCBL1                 0.023   kynurenine aminotransferase I isoform a 
CCBL2                 0.022   kynurenine aminotransferase III isoform 1 
CCBL2                 0.022   kynurenine aminotransferase III isoform 2 
CCBL1                 0.021   kynurenine aminotransferase I isoform b 
C2orf51               0.006   chromosome 2 open reading frame 51 
AADAT                 0.006   kynurenine aminotransferase II 
AADAT                 0.006   kynurenine aminotransferase II 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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