Guide to the Human Genome
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Name: CCBL1 Sequence: fasta or formatted (422aa) NCBI GI: 169881279
Description:

kynurenine aminotransferase I isoform a

Referenced in:

Amino Acid Catabolism
Xenobiotic Pathways

Other entries for this name:
alt prot [372aa] kynurenine aminotransferase I isoform b
alt mRNA [422aa] kynurenine aminotransferase I isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         25           2
 C cysteine            1.4          6           1
 D aspartate           5.7         24           1
 E glutamate           5.5         23           2
 F phenylalanine       6.9         29           2
 G glycine             6.9         29           2
 H histidine           3.1         13           1
 I isoleucine          5.0         21           3
 K lysine              5.2         22           1
 L leucine             8.8         37           2
 M methionine          3.3         14           2
 N asparagine          2.6         11           2
 P proline             6.6         28           3
 Q glutamine           5.9         25           2
 R arginine            4.3         18           2
 S serine              5.9         25           3
 T threonine           4.3         18           1
 V valine              8.1         34           2
 W tryptophan          1.9          8           1
 Y tyrosine            2.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kynurenine aminotransferase I isoform a 
CCBL1                 1.000   kynurenine aminotransferase I isoform a 
CCBL1                 0.855   kynurenine aminotransferase I isoform b 
CCBL2                 0.521   kynurenine aminotransferase III isoform 1 
CCBL2                 0.521   kynurenine aminotransferase III isoform 2 
TAT                   0.070   tyrosine aminotransferase 
ACCS                  0.032   1-aminocyclopropane-1-carboxylate synthase homolog ...
ACCS                  0.032   1-aminocyclopropane-1-carboxylate synthase homolog [...
ACCSL                 0.031   1-aminocyclopropane-1-carboxylate synthase homolog ...
AADAT                 0.026   kynurenine aminotransferase II 
AADAT                 0.026   kynurenine aminotransferase II 
GPT                   0.020   glutamic pyruvate transaminase 
GPT2                  0.015   glutamic pyruvate transaminase 2 isoform 2 
GPT2                  0.015   glutamic pyruvate transaminase 2 isoform 1 
NCOA7                 0.006   nuclear receptor coactivator 7 isoform 2 
CTH                   0.005   cystathionase isoform 1 
PPM1K                 0.005   protein phosphatase 1K (PP2C domain containing) [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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