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Search of human proteins with 4507363
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
(331 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 671 0.0
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 142 3e-34
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 108 7e-24
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 68 1e-11
gi|226498192 atonal homolog 8 [Homo sapiens] 67 3e-11
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 65 6e-11
gi|31077092 neurogenin 2 [Homo sapiens] 63 3e-10
gi|161484632 nescient helix loop helix 2 [Homo sapiens] 63 4e-10
gi|5031945 nescient helix loop helix 2 [Homo sapiens] 63 4e-10
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 63 4e-10
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 62 9e-10
gi|21553337 atonal homolog 7 [Homo sapiens] 61 1e-09
gi|17981708 twist homolog 2 [Homo sapiens] 61 2e-09
gi|4507741 twist [Homo sapiens] 60 2e-09
gi|4885075 atonal homolog 1 [Homo sapiens] 60 2e-09
gi|38202237 transcription factor 21 [Homo sapiens] 59 6e-09
gi|38202239 transcription factor 21 [Homo sapiens] 59 6e-09
gi|148922889 scleraxis homolog B [Homo sapiens] 58 1e-08
gi|186972126 scleraxis homolog A [Homo sapiens] 58 1e-08
gi|4758506 basic helix-loop-helix transcription factor HAND1 [Ho... 55 7e-08
gi|23097242 nephew of atonal 3 [Homo sapiens] 54 2e-07
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 54 3e-07
gi|116805332 musculin [Homo sapiens] 53 4e-07
gi|116517330 factor in the germline alpha [Homo sapiens] 52 7e-07
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 52 7e-07
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 52 7e-07
gi|38455396 neurogenin 1 [Homo sapiens] 51 1e-06
gi|10190680 ASCL3 [Homo sapiens] 51 1e-06
gi|18765727 myogenin [Homo sapiens] 51 2e-06
gi|239749439 PREDICTED: similar to transcription factor 23 [Homo... 51 2e-06
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 671 bits (1731), Expect = 0.0
Identities = 331/331 (100%), Positives = 331/331 (100%)
Query: 1 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP 60
MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP
Sbjct: 1 MTERPPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGP 60
Query: 61 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ 120
GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ
Sbjct: 61 GGGPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAPAPAPASVTAELPGDGRMVQ 120
Query: 121 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD 180
LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD
Sbjct: 121 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD 180
Query: 181 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA 240
GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA
Sbjct: 181 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA 240
Query: 241 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS 300
KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS
Sbjct: 241 KLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAAS 300
Query: 301 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR 331
PDSYTEEPAPKHTARSLHPAMLPAADGAGPR
Sbjct: 301 PDSYTEEPAPKHTARSLHPAMLPAADGAGPR 331
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 142 bits (359), Expect = 3e-34
Identities = 119/305 (39%), Positives = 143/305 (46%), Gaps = 48/305 (15%)
Query: 5 PPSEAARSDPQLEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGG--PGG 62
PP A P + + AE AP A A+ P V E+G RGG P
Sbjct: 3 PPQAQAEVGPTMT--EKAEMVCAPSP-----APAPPPKPASPGPPQVEEVGHRGGSSPPR 55
Query: 63 GPAGGGGAARDLKGRDAATAEARHRVPTTEL--CRPPGPAPAPAPASVTAELPGDGRMVQ 120
P G VP L RPPG A P T P ++Q
Sbjct: 56 LPPG---------------------VPVISLGHSRPPGVA-MPTTELGTLRPP----LLQ 89
Query: 121 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD 180
LS A P AL Y P L S + G F +F ++ R+KRRPS E+++ +
Sbjct: 90 LSTLGTAPPTL---ALHY---HPHPFLNSVYIGPAGPFSIFPSS-RLKRRPSHCELDLAE 142
Query: 181 GPHT-KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFL 239
G KV RR+FTNSRERWRQQNVNGAFAELRKL+PTHPPD+KLSKNE+LRLAMKYI FL
Sbjct: 143 GHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFL 202
Query: 240 AKLLNDQE---EEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLD 296
+LL DQ G K PV G G G + + +P + S
Sbjct: 203 VRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPG 262
Query: 297 GAASP 301
GAA P
Sbjct: 263 GAARP 267
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 108 bits (270), Expect = 7e-24
Identities = 52/72 (72%), Positives = 60/72 (83%)
Query: 186 VVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLND 245
+ R+IFTN+RERWRQQNVN AFA+LRKLIPTHPPDKKLSKNE LRLAM+YINFL K+L +
Sbjct: 1 MTRKIFTNTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGE 60
Query: 246 QEEEGTQRAKTG 257
Q + T A G
Sbjct: 61 QSLQQTGVAAQG 72
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 68.2 bits (165), Expect = 1e-11
Identities = 45/93 (48%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 181 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA 240
GP V +R N+RER R Q+VN AF LR LIPT P D+KLSK E LRLA YI LA
Sbjct: 66 GPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLA 125
Query: 241 K--LLNDQEEEGT---QRAKTGKDPVVGAGGGG 268
LL D ++G + A + K V A GG
Sbjct: 126 NVLLLGDSADDGQPCFRAAGSAKGAVPAAADGG 158
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 66.6 bits (161), Expect = 3e-11
Identities = 69/238 (28%), Positives = 97/238 (40%), Gaps = 28/238 (11%)
Query: 29 PHLVLLNGVAKETSRAAAAEPPVIELGARGGPGGGPAGGGGAARDLKG-RDAATAEARHR 87
P V NG+ T R PV + P P GG A + G R ++AR R
Sbjct: 52 PRAVATNGLRDRTHRLQPVPVPV-PVPVPVAPAVPPRGGTDTAGERGGSRAPEVSDARKR 110
Query: 88 VPTTELCRP----PGPAPAPAPASVTAELPGDG------------RMVQLSPPALAAPAA 131
P P P P PAP S + PG R++ +PPA AP+A
Sbjct: 111 CFALGAVGPGLPTPPPPPPPAPQS---QAPGGPEAQPFREPGLRPRILLCAPPARPAPSA 167
Query: 132 PGR--ALLYSLSQPLASLGSGFFGEPDAFPMFTTNNR-----VKRRPSPYEMEITDGPHT 184
P A S +P G + N++ ++RP ++
Sbjct: 168 PPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASSEIKAL 227
Query: 185 KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKL 242
+ RR+ N+RER R ++ AF LRK +P + +KLSK ILR+A YI LA+L
Sbjct: 228 QQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARL 285
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 65.5 bits (158), Expect = 6e-11
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 12/83 (14%)
Query: 193 NSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLN-DQEEEGT 251
N RER R Q++N AF LR IPT P +K+LSK + LRLA+ YINFL++L+ D G
Sbjct: 169 NVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQADLPLRGG 228
Query: 252 QRAKTGKDPVVGAGGGGGGGGGG 274
GAGG GG GGGG
Sbjct: 229 -----------GAGGCGGPGGGG 240
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 63.2 bits (152), Expect = 3e-10
Identities = 54/158 (34%), Positives = 71/158 (44%), Gaps = 25/158 (15%)
Query: 168 KRRPSPYEMEITDGPHT-------KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPD 220
KRRPS ++ G T K RR+ N+RER R N+N A LR+++PT P D
Sbjct: 87 KRRPSRARA-VSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPED 145
Query: 221 KKLSKNEILRLAMKYINFLAKLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDL 280
KL+K E LR A YI L + L + GGGGGG G + +
Sbjct: 146 AKLTKIETLRFAHNYIWALTETLRLADH---------------CGGGGGGLPGALFSEAV 190
Query: 281 LQDVLSPNSSCGSSLD--GAASPDSYTEEPAPKHTARS 316
L +++ SS D AS S T PAP + S
Sbjct: 191 LLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSS 228
>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 62.8 bits (151), Expect = 4e-10
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 194 SRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLN 244
+RER R + N AFAELRKL+PT PPDKKLSK EILRLA+ YI++L +L+
Sbjct: 84 TRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 134
>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 62.8 bits (151), Expect = 4e-10
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 194 SRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLN 244
+RER R + N AFAELRKL+PT PPDKKLSK EILRLA+ YI++L +L+
Sbjct: 84 TRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 134
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 62.8 bits (151), Expect = 4e-10
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 194 SRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLN 244
+RER R + N AFAELRKL+PT PPDKKLSK EILRLA+ YI++L +L+
Sbjct: 82 TRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 132
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 61.6 bits (148), Expect = 9e-10
Identities = 34/69 (49%), Positives = 42/69 (60%)
Query: 186 VVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLND 245
V RR N +ER R Q++N AFAELR+ IP P D KLSK + LRLA YI +L LL
Sbjct: 98 VKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
Query: 246 QEEEGTQRA 254
++ G A
Sbjct: 158 DDQNGEAEA 166
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 61.2 bits (147), Expect = 1e-09
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQE 247
RR+ N+RER R Q +N AF LR+++P DKKLSK E L++A+ YI L ++L + E
Sbjct: 41 RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAE 100
Query: 248 EEGTQRAKTG 257
G++R G
Sbjct: 101 RFGSERDWVG 110
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 60.8 bits (146), Expect = 2e-09
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQE 247
+RI N RER R Q++N AFA LRK+IPT P D KLSK + L+LA +YI+FL ++L E
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 125
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 60.5 bits (145), Expect = 2e-09
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQE 247
+R+ N RER R Q++N AFA LRK+IPT P D KLSK + L+LA +YI+FL ++L E
Sbjct: 109 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 167
Score = 30.0 bits (66), Expect = 3.0
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 19/54 (35%)
Query: 253 RAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSSLDGAASPDSYTE 306
+ K GK GGGG GGGGG S G SP SY E
Sbjct: 71 QGKRGKKSAGCGGGGGAGGGGG-------------------SSSGGGSPQSYEE 105
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 60.5 bits (145), Expect = 2e-09
Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 98 GPAPAPAPASVTAELPGDGRMVQLSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDA 157
G + A AP E+ G G +V+ S ++ +PG + + L L G
Sbjct: 88 GASEAAAPRD---EVDGRGELVRRSSGGASSSKSPGPV---KVREQLCKLKGG------- 134
Query: 158 FPMFTTNNRVKRRPSPYEMEITDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTH 217
+ R+ +P ++ + RR+ N+RER R +N AF +LR +IP+
Sbjct: 135 --VVVDELGCSRQRAPSSKQVNG---VQKQRRLAANARERRRMHGLNHAFDQLRNVIPSF 189
Query: 218 PPDKKLSKNEILRLAMKYINFLAKLL-----NDQEEEGTQRAKTGKDPVVGA----GGGG 268
DKKLSK E L++A YIN L++LL +Q K+ + A GG G
Sbjct: 190 NNDKKLSKYETLQMAQIYINALSELLQTPSGGEQPPPPPASCKSDHHHLRTAASYEGGAG 249
Query: 269 GGGGGGAPPDDLLQDVLSPNSSCGSSLDGAASPDSYT 305
GA +P SC + AS Y+
Sbjct: 250 NATAAGAQQASGGSQRPTPPGSCRTRFSAPASAGGYS 286
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 58.9 bits (141), Expect = 6e-09
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 168 KRRPSPYEMEITDG--PHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSK 225
KRR +P + G K V+R N+RER R + ++ AF+ L+ +P PPD KLSK
Sbjct: 58 KRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSK 117
Query: 226 NEILRLAMKYINFLAKLL-NDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDV 284
+ LRLA YI L ++L ND+ E G P + AG P+ L++V
Sbjct: 118 LDTLRLASSYIAHLRQILANDKYENGYIHPVNLTWPFMVAG----------KPESDLKEV 167
Query: 285 LSPNSSCGSS 294
++ + CG++
Sbjct: 168 VTASRLCGTT 177
>gi|38202239 transcription factor 21 [Homo sapiens]
Length = 179
Score = 58.9 bits (141), Expect = 6e-09
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 168 KRRPSPYEMEITDG--PHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSK 225
KRR +P + G K V+R N+RER R + ++ AF+ L+ +P PPD KLSK
Sbjct: 58 KRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSK 117
Query: 226 NEILRLAMKYINFLAKLL-NDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDV 284
+ LRLA YI L ++L ND+ E G P + AG P+ L++V
Sbjct: 118 LDTLRLASSYIAHLRQILANDKYENGYIHPVNLTWPFMVAG----------KPESDLKEV 167
Query: 285 LSPNSSCGSS 294
++ + CG++
Sbjct: 168 VTASRLCGTT 177
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 57.8 bits (138), Expect = 1e-08
Identities = 31/56 (55%), Positives = 37/56 (66%)
Query: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLL 243
+R N+RER R +VN AF LR LIPT P D+KLSK E LRLA YI+ L +L
Sbjct: 76 QRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 131
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 57.8 bits (138), Expect = 1e-08
Identities = 31/56 (55%), Positives = 37/56 (66%)
Query: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLL 243
+R N+RER R +VN AF LR LIPT P D+KLSK E LRLA YI+ L +L
Sbjct: 76 QRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 131
>gi|4758506 basic helix-loop-helix transcription factor HAND1 [Homo
sapiens]
Length = 215
Score = 55.5 bits (132), Expect = 7e-08
Identities = 47/134 (35%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 121 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD 180
L PA AAP P P A+ + +G PDA P SP +E
Sbjct: 46 LLSPADAAPDFPAGG-----PPPAAAAAATAYG-PDARP----------GQSPGRLEALG 89
Query: 181 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA 240
G + R+ +ER R +++N AFAELR+ IP P D KLSK + LRLA YI +L
Sbjct: 90 GRLGR--RKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLM 147
Query: 241 KLLNDQEEEGTQRA 254
+L + G A
Sbjct: 148 DVLAKDAQSGDPEA 161
>gi|23097242 nephew of atonal 3 [Homo sapiens]
Length = 166
Score = 53.9 bits (128), Expect = 2e-07
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQE 247
+R N RER R N+N AF +LR+ +PT +K+LS+ E LRLA+ YI+F+ +LL E
Sbjct: 102 QRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCE 161
Query: 248 EE 249
++
Sbjct: 162 KK 163
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 53.5 bits (127), Expect = 3e-07
Identities = 45/127 (35%), Positives = 53/127 (41%), Gaps = 16/127 (12%)
Query: 123 PPALAAP-----AAPGRALLY-SLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEM 176
PP AP A PG SL P G P +RRP P
Sbjct: 7 PPRRRAPVQDTEATPGEGTPDGSLPNPGPEPAKGLRSRPARAAARAPGEGRRRRPGP--- 63
Query: 177 EITDGP----HTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLA 232
GP + + RR+ +N RER R +N AF LR++IP DKKLSK E L LA
Sbjct: 64 ---SGPGGRRDSSIQRRLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLA 120
Query: 233 MKYINFL 239
YI L
Sbjct: 121 KNYIKSL 127
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 52.8 bits (125), Expect = 4e-07
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 185 KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLL- 243
K +R N+RER R + ++ AF+ L+ +P PPD KLSK + LRLA YI L +LL
Sbjct: 105 KQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQ 164
Query: 244 NDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSCGSS 294
D+ E G P V +G PD ++V + N CG++
Sbjct: 165 EDRYENGYVHPVNLTWPFVVSG----------RPDSDTKEVSAANRLCGTT 205
>gi|116517330 factor in the germline alpha [Homo sapiens]
Length = 219
Score = 52.0 bits (123), Expect = 7e-07
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 122 SPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITDG 181
+P L AAP L ++ L + FG P R+KR PS T+
Sbjct: 4 APGVLDPRAAPPALLGTPQAEVLEDVLREQFGP---LPQLAAVCRLKRLPSG-GYSSTEN 59
Query: 182 PHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAK 241
+ RR N++ER R +N+N FA L+ L+P P +K SK +IL+ A +YI L+
Sbjct: 60 LQLVLERRRVANAKERERIKNLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVLSD 119
Query: 242 LLNDQEEEGTQ 252
LL ++ Q
Sbjct: 120 LLEGAKDSKKQ 130
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 52.0 bits (123), Expect = 7e-07
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 96 PPGPAPAPAPASVTAELPGDGRMVQLSPPALAAPAAPGR------ALLYSLSQPLASLGS 149
PP P PAP P + PG PA AA P R A L + + G
Sbjct: 37 PPPPPPAPGPGA-----PG---------PARAAKPVPLRGEEGTEATLAEVKEEGELGGE 82
Query: 150 GFFGEPDAFPMFTTNNRVKRRPSPYEMEITDGP-HTKVVRRIFTNSRERWRQQNVNGAFA 208
E + + ++ P + ++T +RR N+RER R ++N A
Sbjct: 83 EEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALD 142
Query: 209 ELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLL 243
LRK++P + +KLSK E LRLA YI L+++L
Sbjct: 143 NLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL 177
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 52.0 bits (123), Expect = 7e-07
Identities = 49/152 (32%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 168 KRRPSPYEMEITDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNE 227
+RRP+ E T G V RR N RER R + VN F LR+ +P KKLSK E
Sbjct: 37 RRRPATAE---TGGGAAAVARR---NERERNRVKLVNLGFQALRQHVPHGGASKKLSKVE 90
Query: 228 ILRLAMKYINFLAKLLNDQE---------------EEGTQRAKTGKDPVVGA---GGGGG 269
LR A++YI L +LL + + R G PV +
Sbjct: 91 TLRSAVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSAPRGPPGTTPVAASPSRASSSP 150
Query: 270 GGGGGAPPDDLLQDVLSPNSSCGSSLDGAASP 301
G GG + P S +S C +GA SP
Sbjct: 151 GRGGSSEPGSPRSAYSSDDSGC----EGALSP 178
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 51.2 bits (121), Expect = 1e-06
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLL 243
RR+ N RER R N+N A LR ++P+ P D KL+K E LR A YI LA+ L
Sbjct: 93 RRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETL 148
>gi|10190680 ASCL3 [Homo sapiens]
Length = 181
Score = 51.2 bits (121), Expect = 1e-06
Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 127 AAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYE----MEITDGP 182
A ++P L L P SL G + EP F P PY E + GP
Sbjct: 43 APVSSPYSEELPRLPFPSDSLILGNYSEPCPFSF----------PMPYPNYRGCEYSYGP 92
Query: 183 HTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKL 242
R N RER R + VN +A+LR +P +K+LSK E LR A+KYIN+L L
Sbjct: 93 AFTRKR----NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSL 148
Query: 243 LNDQEEE 249
L + E
Sbjct: 149 LYPDKAE 155
>gi|18765727 myogenin [Homo sapiens]
Length = 224
Score = 50.8 bits (120), Expect = 2e-06
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 173 PYEMEITDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLA 232
P+ ++ V RR RE+ R + VN AF L++ +P +++L K EILR A
Sbjct: 67 PWACKVCKRKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNP-NQRLPKVEILRSA 125
Query: 233 MKYINFLAKLLND-QEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDLLQDVLSPNSSC 291
++YI L LL+ +EE R + GGGG P + S +
Sbjct: 126 IQYIERLQALLSSLNQEERDLRYR------------GGGGPQPGVPSECSSHSASCSPEW 173
Query: 292 GSSLDGAASPDSY--TEEPAPKHTARSL 317
GS+L+ +A+P + T +P H SL
Sbjct: 174 GSALEFSANPGDHLLTADPTDAHNLHSL 201
>gi|239749439 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 50.8 bits (120), Expect = 2e-06
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 194 SRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQEE 248
+RER R Q + AF EL++ +P+ PPD KLSK ++L LA YI L + L D E
Sbjct: 56 ARERSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDAE 110
Score = 35.0 bits (79), Expect = 0.093
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 44 AAAAEPPVIELGAR----GGPGGGPAGGGGAARDLKGRDAATAEARHR 87
+A+AEP + R G G GPAG GG +R GR AA AR R
Sbjct: 12 SASAEPAPLAAAIRDSRPGRTGPGPAGPGGGSRSGSGRPAAANAARER 59
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,255,830
Number of Sequences: 37866
Number of extensions: 1074266
Number of successful extensions: 16963
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 642
Number of HSP's that attempted gapping in prelim test: 9898
Number of HSP's gapped (non-prelim): 5722
length of query: 331
length of database: 18,247,518
effective HSP length: 103
effective length of query: 228
effective length of database: 14,347,320
effective search space: 3271188960
effective search space used: 3271188960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.