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Search of human proteins with 4507339
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507339 transcription factor T [Homo sapiens]
(435 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507339 transcription factor T [Homo sapiens] 906 0.0
gi|4827024 T-box 19 [Homo sapiens] 464 e-131
gi|18201894 T-box 5 isoform 3 [Homo sapiens] 209 3e-54
gi|18201892 T-box 5 isoform 1 [Homo sapiens] 209 3e-54
gi|31652232 T-box 5 isoform 1 [Homo sapiens] 209 3e-54
gi|18201896 T-box 5 isoform 2 [Homo sapiens] 206 3e-53
gi|18129690 T-box 4 [Homo sapiens] 203 2e-52
gi|197333868 T-box 2 [Homo sapiens] 199 5e-51
gi|18201900 T-box 6 [Homo sapiens] 196 3e-50
gi|5730081 T-box, brain, 1 [Homo sapiens] 192 5e-49
gi|47419905 T-box 3 protein isoform 1 [Homo sapiens] 190 2e-48
gi|122937456 T-box 18 [Homo sapiens] 190 2e-48
gi|117676399 T-box transcription factor TBX20 [Homo sapiens] 186 4e-47
gi|47419907 T-box 3 protein isoform 2 [Homo sapiens] 186 5e-47
gi|7019549 T-box 21 [Homo sapiens] 184 1e-46
gi|55770860 T-box 15 [Homo sapiens] 177 2e-44
gi|5174711 T-box 1 isoform B [Homo sapiens] 172 5e-43
gi|18104952 T-box 1 isoform C [Homo sapiens] 172 5e-43
gi|18104950 T-box 1 isoform A [Homo sapiens] 172 5e-43
gi|32567784 T-box 10 [Homo sapiens] 172 5e-43
gi|122937388 MAX gene associated [Homo sapiens] 172 5e-43
gi|22538470 eomesodermin [Homo sapiens] 172 7e-43
gi|158187509 T-box 22 isoform 1 [Homo sapiens] 167 2e-41
gi|18375603 T-box 22 isoform 1 [Homo sapiens] 167 2e-41
gi|158187511 T-box 22 isoform 2 [Homo sapiens] 132 6e-31
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 44 3e-04
gi|154426272 hypothetical protein LOC54540 [Homo sapiens] 44 4e-04
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 41 0.002
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 41 0.002
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 41 0.002
>gi|4507339 transcription factor T [Homo sapiens]
Length = 435
Score = 906 bits (2342), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MSSPGTESAGKSLQYRVDHLLSAVENELQAGSEKGDPTERELRVGLEESELWLRFKELTN 60
MSSPGTESAGKSLQYRVDHLLSAVENELQAGSEKGDPTERELRVGLEESELWLRFKELTN
Sbjct: 1 MSSPGTESAGKSLQYRVDHLLSAVENELQAGSEKGDPTERELRVGLEESELWLRFKELTN 60
Query: 61 EMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAP 120
EMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAP
Sbjct: 61 EMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAP 120
Query: 121 SCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQR 180
SCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQR
Sbjct: 121 SCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQR 180
Query: 181 MITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERSDHKEMMEEPGDSQQPG 240
MITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERSDHKEMMEEPGDSQQPG
Sbjct: 181 MITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERSDHKEMMEEPGDSQQPG 240
Query: 241 YSQWGWLLPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNS 300
YSQWGWLLPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNS
Sbjct: 241 YSQWGWLLPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNS 300
Query: 301 PTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTP 360
PTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTP
Sbjct: 301 PTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTP 360
Query: 361 GSQAAAVSNGLGAQFFRGSPAHYTPLTHPVSAPSSSGSPLYEGAAAATDIVDSQYDAAAQ 420
GSQAAAVSNGLGAQFFRGSPAHYTPLTHPVSAPSSSGSPLYEGAAAATDIVDSQYDAAAQ
Sbjct: 361 GSQAAAVSNGLGAQFFRGSPAHYTPLTHPVSAPSSSGSPLYEGAAAATDIVDSQYDAAAQ 420
Query: 421 GRLIASWTPVSPPSM 435
GRLIASWTPVSPPSM
Sbjct: 421 GRLIASWTPVSPPSM 435
>gi|4827024 T-box 19 [Homo sapiens]
Length = 448
Score = 464 bits (1194), Expect = e-131
Identities = 243/427 (56%), Positives = 293/427 (68%), Gaps = 12/427 (2%)
Query: 1 MSSPGTESAGKSLQYRVDHLLSAVENELQAGSEKGDPTERELRVGLEESELWLRFKELTN 60
MS GT K V HLL+ VE+ELQAG EKGDPTE++L++ LE++ LW RFKE+TN
Sbjct: 3 MSELGTR---KPSDGTVSHLLNVVESELQAGREKGDPTEKQLQIILEDAPLWQRFKEVTN 59
Query: 61 EMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAP 120
EMIVTKNGRRMFPVLK++V+GLDPNAMYS LLDFV D+HRWKYVNGEWVP GKPE +
Sbjct: 60 EMIVTKNGRRMFPVLKISVTGLDPNAMYSLLLDFVPTDSHRWKYVNGEWVPAGKPEVSSH 119
Query: 121 SCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQR 180
SCVYIHPDSPNFGAHWMKAP+SFSKVKLTNKLNGGGQIMLNSLHKYEP++HIVRVG R
Sbjct: 120 SCVYIHPDSPNFGAHWMKAPISFSKVKLTNKLNGGGQIMLNSLHKYEPQVHIVRVGSAHR 179
Query: 181 MITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERSDHKEMMEEPGDSQQPG 240
M+T+ FPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKER+ +++ E +SQ
Sbjct: 180 MVTNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNHLRDVPEAISESQHVT 239
Query: 241 YSQ-WGWLLPGTSTLCPPANPHPQFGGALSLPSTHS---CDRYPTLRSHRSSPYPSPYAH 296
YS GW+ +C N + Q+ L LP+ H+ C+ Y LR HR +PYPS Y H
Sbjct: 240 YSHLGGWIFSNPDGVCTAGNSNYQYAAPLPLPAPHTHHGCEHYSGLRGHRQAPYPSAYMH 299
Query: 297 RNNSPTYS--DNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASP-PTSSSQYPSLWSV 353
RN+SP+ + ++S L + D+W+SL H S+L V H P S YP LW++
Sbjct: 300 RNHSPSVNLIESSSNNLQVFSGPDSWTSLSSTPHASILSVPHTNGPINPGPSPYPCLWTI 359
Query: 354 SNGAVTPGSQAAAVSNGLGAQFFRGSPAHYT-PLTHPVSAPSSSGSPLYEGAAAATDIVD 412
SNGA P V F G+PA + P AP+S+G + G + T I
Sbjct: 360 SNGAGGPSGPGPEVHASTPGAFLLGNPAVTSPPSVLSTQAPTSAGVEVL-GEPSLTSIAV 418
Query: 413 SQYDAAA 419
S + A A
Sbjct: 419 STWTAVA 425
>gi|18201894 T-box 5 isoform 3 [Homo sapiens]
Length = 468
Score = 209 bits (533), Expect = 3e-54
Identities = 135/381 (35%), Positives = 187/381 (49%), Gaps = 34/381 (8%)
Query: 42 LRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHR 101
++V L E ELWL+F E+ EMI+TK GRRMFP KV V+GL+P Y L+D V AD+HR
Sbjct: 4 IKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHR 63
Query: 102 WKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIML 160
+K+ + +W GK EP P +Y+HPDSP GAHWM+ VSF K+KLTN L+ G I+L
Sbjct: 64 YKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIIL 123
Query: 161 NSLHKYEPRIHIVRV------GGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFA 214
NS+HKY+PR+HIV+ G +H FPET FIAVT+YQN +IT LKI+ NPFA
Sbjct: 124 NSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFA 183
Query: 215 KAFLDAKERSDHKEMMEEPGDSQQPGYSQWGWLLPGTSTLCPPANPHPQFGG---ALS-- 269
K F + + H+ M + P ++P ++ A+ H F ALS
Sbjct: 184 KGFRGSDDMELHR--MSRMQSKEYP-------VVPRSTVRQKVASNHSPFSSESRALSTS 234
Query: 270 --LPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSPTYSDNSPACLSMLQSHDNWSSLGMPA 327
L S + C+ + S P P+PY P ++S + + S+ P
Sbjct: 235 SNLGSQYQCENGVSGPSQDLLPPPNPY------PLPQEHSQIYHCTKRKEEECSTTDHPY 288
Query: 328 HPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGSQAAAVSNGLGAQFFRGSPAHYTPLT 387
+ S + S YP + T +Q A A P+ P
Sbjct: 289 KKPYMETSPSEEDSFYRSSYPQQQGLGASYRTESAQRQACMYASSA-----PPSEPVPSL 343
Query: 388 HPVSAPSSSGSPLYEGAAAAT 408
+S + P Y T
Sbjct: 344 EDISCNTWPSMPSYSSCTVTT 364
>gi|18201892 T-box 5 isoform 1 [Homo sapiens]
Length = 518
Score = 209 bits (533), Expect = 3e-54
Identities = 135/381 (35%), Positives = 187/381 (49%), Gaps = 34/381 (8%)
Query: 42 LRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHR 101
++V L E ELWL+F E+ EMI+TK GRRMFP KV V+GL+P Y L+D V AD+HR
Sbjct: 54 IKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHR 113
Query: 102 WKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIML 160
+K+ + +W GK EP P +Y+HPDSP GAHWM+ VSF K+KLTN L+ G I+L
Sbjct: 114 YKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIIL 173
Query: 161 NSLHKYEPRIHIVRV------GGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFA 214
NS+HKY+PR+HIV+ G +H FPET FIAVT+YQN +IT LKI+ NPFA
Sbjct: 174 NSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFA 233
Query: 215 KAFLDAKERSDHKEMMEEPGDSQQPGYSQWGWLLPGTSTLCPPANPHPQFGG---ALS-- 269
K F + + H+ M + P ++P ++ A+ H F ALS
Sbjct: 234 KGFRGSDDMELHR--MSRMQSKEYP-------VVPRSTVRQKVASNHSPFSSESRALSTS 284
Query: 270 --LPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSPTYSDNSPACLSMLQSHDNWSSLGMPA 327
L S + C+ + S P P+PY P ++S + + S+ P
Sbjct: 285 SNLGSQYQCENGVSGPSQDLLPPPNPY------PLPQEHSQIYHCTKRKEEECSTTDHPY 338
Query: 328 HPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGSQAAAVSNGLGAQFFRGSPAHYTPLT 387
+ S + S YP + T +Q A A P+ P
Sbjct: 339 KKPYMETSPSEEDSFYRSSYPQQQGLGASYRTESAQRQACMYASSA-----PPSEPVPSL 393
Query: 388 HPVSAPSSSGSPLYEGAAAAT 408
+S + P Y T
Sbjct: 394 EDISCNTWPSMPSYSSCTVTT 414
>gi|31652232 T-box 5 isoform 1 [Homo sapiens]
Length = 518
Score = 209 bits (533), Expect = 3e-54
Identities = 135/381 (35%), Positives = 187/381 (49%), Gaps = 34/381 (8%)
Query: 42 LRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHR 101
++V L E ELWL+F E+ EMI+TK GRRMFP KV V+GL+P Y L+D V AD+HR
Sbjct: 54 IKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHR 113
Query: 102 WKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIML 160
+K+ + +W GK EP P +Y+HPDSP GAHWM+ VSF K+KLTN L+ G I+L
Sbjct: 114 YKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIIL 173
Query: 161 NSLHKYEPRIHIVRV------GGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFA 214
NS+HKY+PR+HIV+ G +H FPET FIAVT+YQN +IT LKI+ NPFA
Sbjct: 174 NSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFA 233
Query: 215 KAFLDAKERSDHKEMMEEPGDSQQPGYSQWGWLLPGTSTLCPPANPHPQFGG---ALS-- 269
K F + + H+ M + P ++P ++ A+ H F ALS
Sbjct: 234 KGFRGSDDMELHR--MSRMQSKEYP-------VVPRSTVRQKVASNHSPFSSESRALSTS 284
Query: 270 --LPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSPTYSDNSPACLSMLQSHDNWSSLGMPA 327
L S + C+ + S P P+PY P ++S + + S+ P
Sbjct: 285 SNLGSQYQCENGVSGPSQDLLPPPNPY------PLPQEHSQIYHCTKRKEEECSTTDHPY 338
Query: 328 HPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGSQAAAVSNGLGAQFFRGSPAHYTPLT 387
+ S + S YP + T +Q A A P+ P
Sbjct: 339 KKPYMETSPSEEDSFYRSSYPQQQGLGASYRTESAQRQACMYASSA-----PPSEPVPSL 393
Query: 388 HPVSAPSSSGSPLYEGAAAAT 408
+S + P Y T
Sbjct: 394 EDISCNTWPSMPSYSSCTVTT 414
>gi|18201896 T-box 5 isoform 2 [Homo sapiens]
Length = 349
Score = 206 bits (525), Expect = 3e-53
Identities = 117/267 (43%), Positives = 157/267 (58%), Gaps = 23/267 (8%)
Query: 42 LRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHR 101
++V L E ELWL+F E+ EMI+TK GRRMFP KV V+GL+P Y L+D V AD+HR
Sbjct: 54 IKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHR 113
Query: 102 WKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIML 160
+K+ + +W GK EP P +Y+HPDSP GAHWM+ VSF K+KLTN L+ G I+L
Sbjct: 114 YKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIIL 173
Query: 161 NSLHKYEPRIHIVRV------GGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFA 214
NS+HKY+PR+HIV+ G +H FPET FIAVT+YQN +IT LKI+ NPFA
Sbjct: 174 NSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFA 233
Query: 215 KAFLDAKERSDHKEMMEEPGDSQQPGYSQWGWLLPGTSTLCPPANPHPQFGG---ALS-- 269
K F + + H+ M + P ++P ++ A+ H F ALS
Sbjct: 234 KGFRGSDDMELHR--MSRMQSKEYP-------VVPRSTVRQKVASNHSPFSSESRALSTS 284
Query: 270 --LPSTHSCDRYPTLRSHRSSPYPSPY 294
L S + C+ + S P P+PY
Sbjct: 285 SNLGSQYQCENGVSGPSQDLLPPPNPY 311
>gi|18129690 T-box 4 [Homo sapiens]
Length = 545
Score = 203 bits (517), Expect = 2e-52
Identities = 98/189 (51%), Positives = 128/189 (67%), Gaps = 7/189 (3%)
Query: 36 DPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFV 95
+ T ++VGL E ELW +F E EMI+TK GRRMFP KV V+G++P Y L+D V
Sbjct: 61 EQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILLIDIV 120
Query: 96 AADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNG 154
AD+HR+K+ + +W+ GK EP P +Y+HPDSP GAHWM+ VSF K+KLTN L+
Sbjct: 121 PADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDP 180
Query: 155 GGQIMLNSLHKYEPRIHIVRV------GGPQRMITSHCFPETQFIAVTAYQNEEITALKI 208
G I+LNS+HKY+PR+HIV+ G +H FPET FI+VT+YQN +IT LKI
Sbjct: 181 FGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKI 240
Query: 209 KYNPFAKAF 217
+ NPFAK F
Sbjct: 241 ENNPFAKGF 249
>gi|197333868 T-box 2 [Homo sapiens]
Length = 712
Score = 199 bits (505), Expect = 5e-51
Identities = 101/192 (52%), Positives = 127/192 (66%), Gaps = 5/192 (2%)
Query: 33 EKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLL 92
E D E + +V LE ELW +F +L EM++TK+GRRMFP KV VSGLD A Y L+
Sbjct: 96 EPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLM 155
Query: 93 DFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKL 152
D VAAD+ R+K+ N W+ GK +P+ P +YIHPDSP G WM PV+F K+KLTN +
Sbjct: 156 DIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNI 215
Query: 153 NG-GGQIMLNSLHKYEPRIHIVRVGG----PQRMITSHCFPETQFIAVTAYQNEEITALK 207
+ G +LNS+HKY+PR HIVR P ++ FPET FIAVTAYQN++IT LK
Sbjct: 216 SDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLK 275
Query: 208 IKYNPFAKAFLD 219
I NPFAK F D
Sbjct: 276 IDNNPFAKGFRD 287
>gi|18201900 T-box 6 [Homo sapiens]
Length = 436
Score = 196 bits (499), Expect = 3e-50
Identities = 131/356 (36%), Positives = 172/356 (48%), Gaps = 51/356 (14%)
Query: 44 VGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWK 103
+ LE ELW F + EMI+TK GRRMFP +V+V+GLDP A Y FLLD + D R++
Sbjct: 93 LSLENRELWKEFSSVGTEMIITKAGRRMFPACRVSVTGLDPEARYLFLLDVIPVDGARYR 152
Query: 104 YVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIMLNS 162
+ W P GK EP+ P VYIHPDSP GAHWM+ PVSF +VKLTN L+ G ++L+S
Sbjct: 153 WQGRRWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVSFHRVKLTNSTLDPHGHLILHS 212
Query: 163 LHKYEPRIHIVRV--------GGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFA 214
+HKY+PRIH+VR GG + S FPET FI+VTAYQN +IT LKI NPFA
Sbjct: 213 MHKYQPRIHLVRAAQLCSQHWGG----MASFRFPETTFISVTAYQNPQITQLKIAANPFA 268
Query: 215 KAF--------------LDAKERSDHKEMMEEPGDSQQPGYSQWGWL------------- 247
K F + K R E G PG L
Sbjct: 269 KGFRENGRNCKRERDARVKRKLRGPEPAATEAYGSGDTPGGPCDSTLGGDIRESDPEQAP 328
Query: 248 LPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSPTYSDNS 307
PG +T A P P GG PS + +P S P+ +P ++
Sbjct: 329 APGEAT----AAPAPLCGG----PSAEAYLLHPAAFHGAPSHLPTRSPSFPEAPDSGRSA 380
Query: 308 PACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGSQ 363
P + L+ G PA P +P + + +P ++ G + GS+
Sbjct: 381 PYSAAFLELPHGSGGSGYPAAPPAVPFAPHF---LQGGPFPLPYTAPGGYLDVGSK 433
>gi|5730081 T-box, brain, 1 [Homo sapiens]
Length = 682
Score = 192 bits (488), Expect = 5e-49
Identities = 153/456 (33%), Positives = 212/456 (46%), Gaps = 89/456 (19%)
Query: 51 LWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWV 110
LWL+F EMI+TK GRRMFP L N+SGLDP A Y+ +D + AD + W++ G+WV
Sbjct: 213 LWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWV 272
Query: 111 PGGKPEPQAP-SCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKL----NGGGQIMLNSLHK 165
P GK + + VY+HPDSPN GAHWM+ +SF K+KLTN N G ++L SLHK
Sbjct: 273 PCGKADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHK 332
Query: 166 YEPRIHIVRVGGPQRMITSH-------CFPETQFIAVTAYQNEEITALKIKYNPFAKAFL 218
Y+PR+H+V V TS FPETQFIAVTAYQN +IT LKI +NPFAK F
Sbjct: 333 YQPRLHVVEVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFR 392
Query: 219 DAKER----SDHKEMMEEPGDSQQ----PG--YSQWGWLLP-------GTSTLCPPANPH 261
D + D + P DS + PG Y+ G L + P A
Sbjct: 393 DNYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAGAG 452
Query: 262 PQFGGALSLPSTHSCDRYPTLRSHRSSPYP-----SPYAHR--------NNSPTYSDNSP 308
P G S+P T+ P +P P +P +R + + ++ N+
Sbjct: 453 PGPGTDRSVPHTNGL-LSPQQAEDPGAPSPQRWFVTPANNRLDFAASAYDTATDFAGNAA 511
Query: 309 ACLSMLQSHDNWSSLGMPAHPSML------PVSHNASPPTSSSQYPSLW-SVSNGAVTP- 360
LS +++ G+ A P P+ + A P ++ P + +G+V P
Sbjct: 512 TLLS-------YAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGTKSGSVLPC 564
Query: 361 -GSQAAAVSNGLGAQFFRGSPAHYTPLTHPVSAPSSSGSPLYEGA---AAATDIVDSQ-- 414
+ AAA + GA + G A ++ SPL GA A D+ DS
Sbjct: 565 WPNSAAAAARMAGANPYLGEEA---------EGLAAERSPLPPGAAEDAKPKDLSDSSWI 615
Query: 415 ----------------YDAAAQGRLIASWTPVSPPS 434
Y+ A + R+ + TPVS S
Sbjct: 616 ETPSSIKSIDSSDSGIYEQAKRRRISPADTPVSESS 651
>gi|47419905 T-box 3 protein isoform 1 [Homo sapiens]
Length = 723
Score = 190 bits (483), Expect = 2e-48
Identities = 96/192 (50%), Positives = 125/192 (65%), Gaps = 5/192 (2%)
Query: 33 EKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLL 92
E + E + +V LE ELW +F + EM++TK+GRRMFP KV SGLD A Y L+
Sbjct: 94 EPEEEVEDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLM 153
Query: 93 DFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKL 152
D +AAD+ R+K+ N W+ GK +P+ P +YIHPDSP G WM V+F K+KLTN +
Sbjct: 154 DIIAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNI 213
Query: 153 NG-GGQIMLNSLHKYEPRIHIVRVGG----PQRMITSHCFPETQFIAVTAYQNEEITALK 207
+ G +LNS+HKY+PR HIVR P ++ FPET+FIAVTAYQN++IT LK
Sbjct: 214 SDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYLFPETEFIAVTAYQNDKITQLK 273
Query: 208 IKYNPFAKAFLD 219
I NPFAK F D
Sbjct: 274 IDNNPFAKGFRD 285
>gi|122937456 T-box 18 [Homo sapiens]
Length = 607
Score = 190 bits (483), Expect = 2e-48
Identities = 110/269 (40%), Positives = 150/269 (55%), Gaps = 32/269 (11%)
Query: 37 PTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVA 96
P+ + RV L+ +ELW RF E+ EMI+TK GRRMFP ++V +SGLDP+ Y +D V
Sbjct: 134 PSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLDPHQQYYIAMDIVP 193
Query: 97 ADNHRWKYV--NGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLT-NKLN 153
DN R++YV + +W+ G + P VYIHPDSP G WM+ +SF K+KLT N+L+
Sbjct: 194 VDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLKLTNNELD 253
Query: 154 GGGQIMLNSLHKYEPRIHIVRVG-----GPQRMITS------HCFPETQFIAVTAYQNEE 202
G I+L+S+HKY+PR+H++R P + + S FPET F VTAYQN++
Sbjct: 254 DQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPETVFTTVTAYQNQQ 313
Query: 203 ITALKIKYNPFAKAFLDAKERSDHKEMMEE-----------------PGDSQQPGYSQWG 245
IT LKI NPFAK F D+ E + E PG +Q G +
Sbjct: 314 ITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDIPGIPKQ-GNASSS 372
Query: 246 WLLPGTSTLCPPANPHPQFGGALSLPSTH 274
LL GT P +PH G + S P+ H
Sbjct: 373 TLLQGTGNGVPATHPHLLSGSSCSSPAFH 401
>gi|117676399 T-box transcription factor TBX20 [Homo sapiens]
Length = 447
Score = 186 bits (472), Expect = 4e-47
Identities = 123/332 (37%), Positives = 174/332 (52%), Gaps = 32/332 (9%)
Query: 37 PTERELRVG--LEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDF 94
P+E ++ LE ELW +F EL EMI+TK+GRRMFP ++V+ SG+DP A Y L+D
Sbjct: 93 PSEEMAKIACSLETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPEAKYIVLMDI 152
Query: 95 VAADNHRWKYV--NGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLT-NK 151
V DN R++Y W+ GK +P P+ +Y+HPDSP G +K VSF KVKLT N+
Sbjct: 153 VPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNE 212
Query: 152 LNGGGQIMLNSLHKYEPRIHIVR--------VGGPQRMITSHCFPETQFIAVTAYQNEEI 203
L+ G I+LNS+HKY+PR+HI++ + + FPET F AVTAYQN+ I
Sbjct: 213 LDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAVTAYQNQLI 272
Query: 204 TALKIKYNPFAKAFLDAK-----ERSDHKEMMEEPGDSQQPGYSQWGWLLPGTSTLCPPA 258
T LKI NPFAK F D+ ER + ++++ ++ P + G L +
Sbjct: 273 TKLKIDSNPFAKGFRDSSRLTDIERESVESLIQKHSYARSPIRTYGG----EEDVLGDES 328
Query: 259 NPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNN-----SPTYSDNSPACLSM 313
P G A + S + + SS +P + H + + T S +P +
Sbjct: 329 QTTPNRGSAFTTSDNLSLSSWVS----SSSSFPG-FQHPQSLTALGTSTASIATPIPHPI 383
Query: 314 LQSHDNWSSLGMPAHPSMLPVSHNASPPTSSS 345
S +S LGMP PS + S S PT S
Sbjct: 384 QGSLPPYSRLGMPLTPSAIASSMQGSGPTFPS 415
>gi|47419907 T-box 3 protein isoform 2 [Homo sapiens]
Length = 743
Score = 186 bits (471), Expect = 5e-47
Identities = 97/212 (45%), Positives = 126/212 (59%), Gaps = 25/212 (11%)
Query: 33 EKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLL 92
E + E + +V LE ELW +F + EM++TK+GRRMFP KV SGLD A Y L+
Sbjct: 94 EPEEEVEDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLM 153
Query: 93 DFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKL 152
D +AAD+ R+K+ N W+ GK +P+ P +YIHPDSP G WM V+F K+KLTN +
Sbjct: 154 DIIAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNI 213
Query: 153 NG---------------------GGQIMLNSLHKYEPRIHIVRVGG----PQRMITSHCF 187
+ G Q +LNS+HKY+PR HIVR P ++ F
Sbjct: 214 SDKHGFTLAFPSDHATWQGNYSFGTQTILNSMHKYQPRFHIVRANDILKLPYSTFRTYLF 273
Query: 188 PETQFIAVTAYQNEEITALKIKYNPFAKAFLD 219
PET+FIAVTAYQN++IT LKI NPFAK F D
Sbjct: 274 PETEFIAVTAYQNDKITQLKIDNNPFAKGFRD 305
>gi|7019549 T-box 21 [Homo sapiens]
Length = 535
Score = 184 bits (468), Expect = 1e-46
Identities = 97/189 (51%), Positives = 118/189 (62%), Gaps = 12/189 (6%)
Query: 41 ELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNH 100
+LRV L LW +F + EMI+TK GRRMFP L V+GL+P + Y +D V D H
Sbjct: 136 KLRVALNNHLLWSKFNQHQTEMIITKQGRRMFPFLSFTVAGLEPTSHYRMFVDVVLVDQH 195
Query: 101 RWKYVNGEWVPGGKPEPQAP-SCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGG--- 156
W+Y +G+WV GK E P + +Y+HPDSPN GAHWM+ VSF K+KLTN
Sbjct: 196 HWRYQSGKWVQCGKAEGSMPGNRLYVHPDSPNTGAHWMRQEVSFGKLKLTNNKGASNNVT 255
Query: 157 -QIMLNSLHKYEPRIHIVRV--GGPQRMITS-----HCFPETQFIAVTAYQNEEITALKI 208
I+L SLHKY+PR+HIV V G P+ + F ETQFIAVTAYQN EIT LKI
Sbjct: 256 QMIVLQSLHKYQPRLHIVEVNDGEPEAACNASNTHIFTFQETQFIAVTAYQNAEITQLKI 315
Query: 209 KYNPFAKAF 217
NPFAK F
Sbjct: 316 DNNPFAKGF 324
>gi|55770860 T-box 15 [Homo sapiens]
Length = 496
Score = 177 bits (449), Expect = 2e-44
Identities = 129/393 (32%), Positives = 194/393 (49%), Gaps = 45/393 (11%)
Query: 41 ELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNH 100
E++V L+ ++LW RF ++ EMI+TK GRRMFP ++V ++GLDP+ Y +D V DN
Sbjct: 6 EIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYYIAMDIVPVDNK 65
Query: 101 RWKYV--NGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLT-NKLNGGGQ 157
R++YV + +W+ G + P VYIHPDS G WM+ VSF K+KLT N+L+ G
Sbjct: 66 RYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDKLKLTNNELDDQGH 125
Query: 158 IMLNSLHKYEPRIHIVRVGGPQRM-----------ITSHCFPETQFIAVTAYQNEEITAL 206
I+L+S+HKY+PR+H++R + + + FPET F VTAYQN++IT L
Sbjct: 126 IILHSMHKYQPRVHVIRKDFSSDLSPTKPVPVGDGVKTFNFPETVFTTVTAYQNQQITRL 185
Query: 207 KIKYNPFAKAFLDA-KERSDHKEMMEEPGDSQQPGYSQWGWLLPGTSTLC--PPANPHPQ 263
KI NPFAK F D+ + R+ + +ME Y+ W P TL Q
Sbjct: 186 KIDRNPFAKGFRDSGRNRTGLEAIMET--------YAFW---RPPVRTLTFEDFTTMQKQ 234
Query: 264 FGGAL-SLPSTHSCDR-YPTLRSHRSSPYPSPYAHRNNSPTY--------------SDNS 307
GG+ + P+T S P+ SH SP SP T+ SD
Sbjct: 235 QGGSTGTSPTTSSTGTPSPSASSHLLSPSCSPPTFHLAPNTFNVGCRESQLCNLNLSDYP 294
Query: 308 PACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGS-QAAA 366
P S + + ++ L + + + +A+ P+ + S+ +G TP S +
Sbjct: 295 PCARSNMAALQSYPGLSDSGYNRLQSGTTSATQPSETFMPQRTPSLISGIPTPPSLPGNS 354
Query: 367 VSNGLGAQFFRGSPAHYTPLTHPVSAPSSSGSP 399
G Q + + + +A SSS SP
Sbjct: 355 KMEAYGGQLGSFPTSQFQYVMQAGNAASSSSSP 387
>gi|5174711 T-box 1 isoform B [Homo sapiens]
Length = 372
Score = 172 bits (436), Expect = 5e-43
Identities = 92/186 (49%), Positives = 114/186 (61%), Gaps = 10/186 (5%)
Query: 44 VGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWK 103
V LE LW F +L EMIVTK GRRMFP +V + G+DP A Y L+DFV D+ R++
Sbjct: 112 VQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYR 171
Query: 104 YV--NGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIML 160
Y + W+ GK +P P V+ HPDSP GA WMK VSF K+KLTN L+ G I+L
Sbjct: 172 YAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIIL 231
Query: 161 NSLHKYEPRIHIVRVGG-------PQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPF 213
NS+H+Y+PR H+V V + + F ET+F AVTAYQN IT LKI NPF
Sbjct: 232 NSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPF 291
Query: 214 AKAFLD 219
AK F D
Sbjct: 292 AKGFRD 297
>gi|18104952 T-box 1 isoform C [Homo sapiens]
Length = 495
Score = 172 bits (436), Expect = 5e-43
Identities = 92/186 (49%), Positives = 114/186 (61%), Gaps = 10/186 (5%)
Query: 44 VGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWK 103
V LE LW F +L EMIVTK GRRMFP +V + G+DP A Y L+DFV D+ R++
Sbjct: 112 VQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYR 171
Query: 104 YV--NGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIML 160
Y + W+ GK +P P V+ HPDSP GA WMK VSF K+KLTN L+ G I+L
Sbjct: 172 YAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIIL 231
Query: 161 NSLHKYEPRIHIVRVGG-------PQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPF 213
NS+H+Y+PR H+V V + + F ET+F AVTAYQN IT LKI NPF
Sbjct: 232 NSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPF 291
Query: 214 AKAFLD 219
AK F D
Sbjct: 292 AKGFRD 297
>gi|18104950 T-box 1 isoform A [Homo sapiens]
Length = 398
Score = 172 bits (436), Expect = 5e-43
Identities = 92/186 (49%), Positives = 114/186 (61%), Gaps = 10/186 (5%)
Query: 44 VGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWK 103
V LE LW F +L EMIVTK GRRMFP +V + G+DP A Y L+DFV D+ R++
Sbjct: 112 VQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYR 171
Query: 104 YV--NGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNGGGQIML 160
Y + W+ GK +P P V+ HPDSP GA WMK VSF K+KLTN L+ G I+L
Sbjct: 172 YAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIIL 231
Query: 161 NSLHKYEPRIHIVRVGG-------PQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPF 213
NS+H+Y+PR H+V V + + F ET+F AVTAYQN IT LKI NPF
Sbjct: 232 NSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPF 291
Query: 214 AKAFLD 219
AK F D
Sbjct: 292 AKGFRD 297
>gi|32567784 T-box 10 [Homo sapiens]
Length = 385
Score = 172 bits (436), Expect = 5e-43
Identities = 93/200 (46%), Positives = 119/200 (59%), Gaps = 10/200 (5%)
Query: 31 GSEKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSF 90
G +P + V LE LW F +L EMIVTK GRRMFP +V + G+D A Y+
Sbjct: 54 GQGPKNPRVSRVTVQLEMKPLWEEFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYAL 113
Query: 91 LLDFVAADNHRWKYV--NGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKL 148
L+DF+ D+ R++Y + W+ GK +P P V+ HPDSP GA WM+ VSF K+KL
Sbjct: 114 LMDFIPLDDKRYRYAFHSSAWLVAGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKL 173
Query: 149 TNK-LNGGGQIMLNSLHKYEPRIHIVRVGG-------PQRMITSHCFPETQFIAVTAYQN 200
TN L+ G I+LNS+H+Y+PR H+V V Q S F ETQF AVTAYQN
Sbjct: 174 TNNLLDDNGHIILNSMHRYQPRFHVVFVDPRKDSERYAQENFKSFIFTETQFTAVTAYQN 233
Query: 201 EEITALKIKYNPFAKAFLDA 220
IT LKI NPFAK F ++
Sbjct: 234 HRITQLKIASNPFAKGFRES 253
>gi|122937388 MAX gene associated [Homo sapiens]
Length = 3114
Score = 172 bits (436), Expect = 5e-43
Identities = 91/215 (42%), Positives = 128/215 (59%), Gaps = 12/215 (5%)
Query: 36 DPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFV 95
D T + V L+ + +W F + EMI+TK GRRMFP + ++GLD N Y ++D
Sbjct: 69 DCTVGGITVTLDNNSMWNEFYHRSTEMILTKQGRRMFPYCRYWITGLDSNLKYILVMDIS 128
Query: 96 AADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNK-LNG 154
DNHR+K+ W P GK EP V+IHP+SP+ G +WM PVSF K+KLTN L+
Sbjct: 129 PVDNHRYKWNGRWWEPSGKAEPHVLGRVFIHPESPSTGHYWMHQPVSFYKLKLTNNTLDQ 188
Query: 155 GGQIMLNSLHKYEPRIH---------IVRVGGPQRMITSHCFPETQFIAVTAYQNEEITA 205
G I+L+S+H+Y PR+H ++++ GP + + FP+T+F AVTAYQN +IT
Sbjct: 189 EGHIILHSMHRYLPRLHLVPAEKAVEVIQLNGPG--VHTFTFPQTEFFAVTAYQNIQITQ 246
Query: 206 LKIKYNPFAKAFLDAKERSDHKEMMEEPGDSQQPG 240
LKI YNPFAK F D + + ++ S Q G
Sbjct: 247 LKIDYNPFAKGFRDDGLNNKPQRDGKQKNSSDQEG 281
>gi|22538470 eomesodermin [Homo sapiens]
Length = 686
Score = 172 bits (435), Expect = 7e-43
Identities = 90/187 (48%), Positives = 118/187 (63%), Gaps = 14/187 (7%)
Query: 51 LWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWV 110
LWL+F EMI+TK GRRMFP L N++GL+P A Y+ ++ V AD + W++ G+WV
Sbjct: 276 LWLKFHRHQTEMIITKQGRRMFPFLSFNINGLNPTAHYNVFVEVVLADPNHWRFQGGKWV 335
Query: 111 PGGKPEPQAP-SCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKL----NGGGQIMLNSLHK 165
GK + + +Y+HP+SPN G+HWM+ +SF K+KLTN N I+L SLHK
Sbjct: 336 TCGKADNNMQGNKMYVHPESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQMIVLQSLHK 395
Query: 166 YEPRIHIVRV--------GGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAF 217
Y+PR+HIV V P + T F ETQFIAVTAYQN +IT LKI +NPFAK F
Sbjct: 396 YQPRLHIVEVTEDGVEDLNEPSKTQT-FTFSETQFIAVTAYQNTDITQLKIDHNPFAKGF 454
Query: 218 LDAKERS 224
D + S
Sbjct: 455 RDNYDSS 461
>gi|158187509 T-box 22 isoform 1 [Homo sapiens]
Length = 520
Score = 167 bits (423), Expect = 2e-41
Identities = 120/357 (33%), Positives = 174/357 (48%), Gaps = 57/357 (15%)
Query: 31 GSEKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSF 90
G+ E+++++ L+ SELW RF ++ EMI+TK GRRMFP ++V V GLDP Y
Sbjct: 81 GNSSESLEEKDIQMELQGSELWKRFHDIGTEMIITKAGRRMFPSVRVKVKGLDPGKQYHV 140
Query: 91 LLDFVAADNHRWKYV--NGEWVPGGKPEPQAPSCV----YIHPDSPNFGAHWMKAPVSFS 144
+D V D+ R++YV + +W+ G + C+ Y+HPDSP G WM+ +SF
Sbjct: 141 AIDVVPVDSKRYRYVYHSSQWMVAGNTD---HLCIIPRFYVHPDSPCSGETWMRQIISFD 197
Query: 145 KVKLT-NKLNGGGQIMLNSLHKYEPRIHIVRVGG----------PQRMITSHCFPETQFI 193
++KLT N+++ G I+L S+HKY+PR+H++ G P + + F ET+F
Sbjct: 198 RMKLTNNEMDDKGHIILQSMHKYKPRVHVIEQGSSVDLSQIQSLPTEGVKTFSFKETEFT 257
Query: 194 AVTAYQNEEITALKIKYNPFAKAFLD-AKERSDHKEMMEEPGDSQQPGYSQWGWLLPGTS 252
VTAYQN++IT LKI+ NPFAK F D + R ++E + W P +
Sbjct: 258 TVTAYQNQQITKLKIERNPFAKGFRDTGRNRGVLDGLLE-----------TYPW-RPSFT 305
Query: 253 TLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSPTYSDNSPACLS 312
Q G + S P T S +P SP S SP C S
Sbjct: 306 LDFKTFGADTQSGSSGSSPVT----------SSGGAP----------SPLNSLLSPLCFS 345
Query: 313 MLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGSQAAAVSN 369
+ H SSLGMP + LP N + P P+ + V P + A SN
Sbjct: 346 PM-FHLPTSSLGMPCPEAYLP---NVNLPLCYKICPTNFWQQQPLVLPAPERLASSN 398
>gi|18375603 T-box 22 isoform 1 [Homo sapiens]
Length = 520
Score = 167 bits (423), Expect = 2e-41
Identities = 120/357 (33%), Positives = 174/357 (48%), Gaps = 57/357 (15%)
Query: 31 GSEKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSF 90
G+ E+++++ L+ SELW RF ++ EMI+TK GRRMFP ++V V GLDP Y
Sbjct: 81 GNSSESLEEKDIQMELQGSELWKRFHDIGTEMIITKAGRRMFPSVRVKVKGLDPGKQYHV 140
Query: 91 LLDFVAADNHRWKYV--NGEWVPGGKPEPQAPSCV----YIHPDSPNFGAHWMKAPVSFS 144
+D V D+ R++YV + +W+ G + C+ Y+HPDSP G WM+ +SF
Sbjct: 141 AIDVVPVDSKRYRYVYHSSQWMVAGNTD---HLCIIPRFYVHPDSPCSGETWMRQIISFD 197
Query: 145 KVKLT-NKLNGGGQIMLNSLHKYEPRIHIVRVGG----------PQRMITSHCFPETQFI 193
++KLT N+++ G I+L S+HKY+PR+H++ G P + + F ET+F
Sbjct: 198 RMKLTNNEMDDKGHIILQSMHKYKPRVHVIEQGSSVDLSQIQSLPTEGVKTFSFKETEFT 257
Query: 194 AVTAYQNEEITALKIKYNPFAKAFLD-AKERSDHKEMMEEPGDSQQPGYSQWGWLLPGTS 252
VTAYQN++IT LKI+ NPFAK F D + R ++E + W P +
Sbjct: 258 TVTAYQNQQITKLKIERNPFAKGFRDTGRNRGVLDGLLE-----------TYPW-RPSFT 305
Query: 253 TLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSPTYSDNSPACLS 312
Q G + S P T S +P SP S SP C S
Sbjct: 306 LDFKTFGADTQSGSSGSSPVT----------SSGGAP----------SPLNSLLSPLCFS 345
Query: 313 MLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGSQAAAVSN 369
+ H SSLGMP + LP N + P P+ + V P + A SN
Sbjct: 346 PM-FHLPTSSLGMPCPEAYLP---NVNLPLCYKICPTNFWQQQPLVLPAPERLASSN 398
>gi|158187511 T-box 22 isoform 2 [Homo sapiens]
Length = 400
Score = 132 bits (332), Expect = 6e-31
Identities = 103/317 (32%), Positives = 147/317 (46%), Gaps = 57/317 (17%)
Query: 71 MFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYV--NGEWVPGGKPEPQAPSCV----Y 124
MFP ++V V GLDP Y +D V D+ R++YV + +W+ G + C+ Y
Sbjct: 1 MFPSVRVKVKGLDPGKQYHVAIDVVPVDSKRYRYVYHSSQWMVAGNTDHL---CIIPRFY 57
Query: 125 IHPDSPNFGAHWMKAPVSFSKVKLTN-KLNGGGQIMLNSLHKYEPRIHIVRVGG------ 177
+HPDSP G WM+ +SF ++KLTN +++ G I+L S+HKY+PR+H++ G
Sbjct: 58 VHPDSPCSGETWMRQIISFDRMKLTNNEMDDKGHIILQSMHKYKPRVHVIEQGSSVDLSQ 117
Query: 178 ----PQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLD-AKERSDHKEMMEE 232
P + + F ET+F VTAYQN++IT LKI+ NPFAK F D + R ++E
Sbjct: 118 IQSLPTEGVKTFSFKETEFTTVTAYQNQQITKLKIERNPFAKGFRDTGRNRGVLDGLLE- 176
Query: 233 PGDSQQPGYSQWGWLLPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPS 292
+ W P + Q G + S P T S +P
Sbjct: 177 ----------TYPW-RPSFTLDFKTFGADTQSGSSGSSPVT----------SSGGAP--- 212
Query: 293 PYAHRNNSPTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWS 352
SP S SP C S + H SSLGMP + LP N + P P+ +
Sbjct: 213 -------SPLNSLLSPLCFSPM-FHLPTSSLGMPCPEAYLP---NVNLPLCYKICPTNFW 261
Query: 353 VSNGAVTPGSQAAAVSN 369
V P + A SN
Sbjct: 262 QQQPLVLPAPERLASSN 278
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 43.9 bits (102), Expect = 3e-04
Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 249 PGTSTLCPPANP-------HPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSP 301
PG + PP +P HP PS H PT S + P P+ H P
Sbjct: 16 PGKICIHPPLHPPTHSPSIHPSIHPPTH-PSIHPSIHPPTHPSIHTHPPIHPHTH---PP 71
Query: 302 TYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPG 361
+ P+ ++ + SL P H S+ P +H PPT SS +PS+ ++ + P
Sbjct: 72 IHPPTHPSIHPLIHPSIH-PSLHPPTHSSIHPSTH---PPTHSSIHPSIHPSTHPLIHPS 127
Query: 362 SQAAAVSNGLGAQFFRGSPAHYTPLTHPVSAPS 394
+ S+ P H P THP+ PS
Sbjct: 128 IHPSTHSS-------IHPPTHSHPSTHPLIHPS 153
Score = 40.8 bits (94), Expect = 0.002
Identities = 46/162 (28%), Positives = 62/162 (38%), Gaps = 37/162 (22%)
Query: 249 PGTSTLCPPANP--HPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSPTYSDN 306
P S++ P +P HP ++ PSTHS PT + P P H PT+S
Sbjct: 107 PTHSSIHPSIHPSTHPLIHPSIH-PSTHSSIHPPTHSHPSTHPLIHPSIH---PPTHSPI 162
Query: 307 SPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASP-PTSSSQYPSLWSVSNGAVTPGSQAA 365
P S+ P HP P H++ PT SS +P S + ++ P +
Sbjct: 163 HP-------------SIHPPTHPPTHPSIHSSIHLPTHSSIHPPTHSFIHPSIHPPTH-- 207
Query: 366 AVSNGLGAQFFRGSPAHYTPLTHPVSAPSSSGSPLYEGAAAA 407
SP H PLTHP PS S + G A
Sbjct: 208 -------------SPIH--PLTHPFIHPSDSSAASAGGVGPA 234
>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
Length = 789
Score = 43.5 bits (101), Expect = 4e-04
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 265 GGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSPTYSDNSPACLSMLQSHDNWSSLG 324
G +L P T + +P H+ S +P NSPT PA S++ SH SS G
Sbjct: 106 GSSLGSPPTIPGEAFPVSEHHQHSDLTAP----PNSPTGHHPQPA--SLIPSHP--SSFG 157
Query: 325 MPAHPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPG 361
P HP +LP + A P +S+ P + + TPG
Sbjct: 158 SPPHPHLLPTTPAAPFPAQASECPV--AAATAPHTPG 192
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 41.2 bits (95), Expect = 0.002
Identities = 50/218 (22%), Positives = 78/218 (35%), Gaps = 25/218 (11%)
Query: 233 PGDSQQPGYSQW---------GWLLPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTLR 283
PG + P YS G P + + P + + + S S + P+
Sbjct: 1585 PGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYS 1644
Query: 284 SHRSSPYPSPYAHRNNSPTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASP--- 340
S P+ ++ SP+YS SP+ S+ S P PS P S + SP
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 341 ---PTSSSQYPSLWSVSNGAVTPGSQAAAVSNGLGAQFFRGSPAHYTPLT---HPVSAPS 394
PTS S P+ S S +P + S + + + +Y+P + P S
Sbjct: 1705 SYSPTSPSYSPT--SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSY 1762
Query: 395 SSGSPLYEGAAAATDIVDSQYDAAAQGRLIASWTPVSP 432
S SP Y + Y + S++P SP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTS-----PSYSPTSP 1795
Score = 35.4 bits (80), Expect = 0.10
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Query: 239 PGYSQWGWLLPGTSTLCPPANP-HPQFGGALSLPSTHSCDRYPTLRSHR-SSPYPSPYA- 295
P YS P S P +P P + S S PT S+ +SP SP +
Sbjct: 1697 PSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 296 -HRNNSPTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPS--LWS 352
+ SP+YS SP+ ++ S P PS P S + S PTS S PS ++
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYS-PTSPSYSPSSPRYT 1812
Query: 353 VSNGAVTPGSQAAAVSNGLGAQFFRGSPAHYTPLTHPVSAPSS 395
+ TP S + + S + + + YTP T P +PSS
Sbjct: 1813 PQSPTYTPSSPSYSPS----SPSYSPTSPKYTP-TSPSYSPSS 1850
Score = 33.5 bits (75), Expect = 0.39
Identities = 53/199 (26%), Positives = 77/199 (38%), Gaps = 21/199 (10%)
Query: 239 PGYSQWGWLLPGTSTLCPPANP-HPQFGGALSLPSTHSCDRYPTLRSHR-SSPYPSPYAH 296
P YS P S P +P P + S S PT S+ +SP SP +
Sbjct: 1676 PSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 297 RNNSPTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSLWSVSNG 356
+ SPT SP + + N++ P PS P S + S PTS + P+ S +
Sbjct: 1733 -SYSPTSPSYSPTSPNYSPTSPNYT----PTSPSYSPTSPSYS-PTSPNYTPT--SPNYS 1784
Query: 357 AVTPGSQAAAVSNGLGAQFFRGSPAHYTPL--THPVSAPS-SSGSPLYEGAAAATDIVDS 413
+P + S + + S YTP T+ S+PS S SP Y +
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
Query: 414 QYDAAAQGRLIASWTPVSP 432
Y ++ +TP SP
Sbjct: 1845 SYSPSS-----PEYTPTSP 1858
Score = 32.0 bits (71), Expect = 1.1
Identities = 49/196 (25%), Positives = 69/196 (35%), Gaps = 26/196 (13%)
Query: 239 PGYSQWGWLLPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRN 298
P YS TS P +P + S S + PT S PS ++
Sbjct: 1781 PNYSPTSPSYSPTSPSYSPTSP------SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Query: 299 NSPTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASP--PTSSSQYPSLWSVSNG 356
SP Y+ SP+ + S P P P S SP PT S P +S ++
Sbjct: 1835 TSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPK-YSPTSP 1893
Query: 357 AVTPGSQAAAVSNGLGAQFFRGSPAHYTPLTHPVSAPSSSGSPLYEGAAAATDIVDSQYD 416
+P S ++ + SP +P P S S SP Y + T S Y
Sbjct: 1894 TYSPTSPVYTPTSP------KYSPT--SPTYSPTSPKYSPTSPTY----SPTSPKGSTYS 1941
Query: 417 AAAQGRLIASWTPVSP 432
+ G ++P SP
Sbjct: 1942 PTSPG-----YSPTSP 1952
Score = 31.6 bits (70), Expect = 1.5
Identities = 54/203 (26%), Positives = 79/203 (38%), Gaps = 22/203 (10%)
Query: 239 PGYSQWGWLLPGTSTLCPPANP-HPQFGGALSLPSTHSCDRYPTLRSHR-SSPYPSPYAH 296
P YS P S P +P P + S S + PT S+ +SP SP +
Sbjct: 1718 PSYSPTS---PSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Query: 297 RNNSPTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASP--PTSSSQYPSLWSVS 354
N +PT + SP S + ++S P PS P S +P PT + PS +S S
Sbjct: 1775 -NYTPTSPNYSPTSPSYSPTSPSYS----PTSPSYSPSSPRYTPQSPTYTPSSPS-YSPS 1828
Query: 355 NGAVTPGSQAAAVSNGLGAQFFRGSPAHYTPLT---HPVSAPSSSGSPLYEGAAAATDIV 411
+ + +P S + + + S YTP + P S S SP Y +
Sbjct: 1829 SPSYSPTSPKYTPT----SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPT 1884
Query: 412 DSQYDAAAQGRLIAS--WTPVSP 432
+Y + S +TP SP
Sbjct: 1885 TPKYSPTSPTYSPTSPVYTPTSP 1907
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 40.8 bits (94), Expect = 0.002
Identities = 45/166 (27%), Positives = 63/166 (37%), Gaps = 9/166 (5%)
Query: 245 GWLLPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSPYPSPYAHRNNSPTYS 304
G L PG +PHP G L S + P+ SH SP P P SPT S
Sbjct: 45 GPLPPGKYMAGLNLHPHP---GEAFLGSFVASGMGPSASSH-GSPVPLPSDLSFRSPTPS 100
Query: 305 DNSPACLSMLQSHDNWSSLGMPAHPSMLPVSH-----NASPPTSSSQYPSLWSVSNGAVT 359
+ L +H+ +S L +PS L ++H + SP S PS++ G
Sbjct: 101 NLPMVQLWAAHAHEGFSHLPSGLYPSYLHLNHLEPPSSGSPLLSQLGQPSIFDTQKGQGP 160
Query: 360 PGSQAAAVSNGLGAQFFRGSPAHYTPLTHPVSAPSSSGSPLYEGAA 405
G + G +P+ TP S + GS +G A
Sbjct: 161 GGDGFYLPTAGAPGSLHSHAPSARTPGGGHSSGAPAKGSSSRDGPA 206
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 40.8 bits (94), Expect = 0.002
Identities = 55/191 (28%), Positives = 71/191 (37%), Gaps = 30/191 (15%)
Query: 249 PGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTL-RSHRSSPYP------SPYAHRNNSP 301
PG P A P PQF AL T R P L +H +P P+ R SP
Sbjct: 1875 PGFPVSLPLAYPPPQFAHALLAAQTFQQIRPPRLPMTHFGGTFPPAQSTWGPFPVRPLSP 1934
Query: 302 TYSDNSPACLSMLQSHDNWSSLGMPAHPS-------MLPVSHNAS--PPTSSSQYPSLWS 352
+ NSP M+ H N +S G + + S +AS P TS++ PS S
Sbjct: 1935 ARATNSPK-PHMVPRHSNQNSSGSQVNSAGSLTSSPTTTTSSSASTVPGTSTNGSPSSPS 1993
Query: 353 V-----------SNGAVTPGSQAAAVSNGLGAQFFRGSPAHYTPLTHPVSAPSSSGSPLY 401
V SN T + A SN A P +PVS+PSS P
Sbjct: 1994 VRRQLFVTVVKTSNATTTTVTTTA--SNNNTAPTNATYPMPTAKEHYPVSSPSSPSPPAQ 2051
Query: 402 EGAAAATDIVD 412
G + +D
Sbjct: 2052 PGGVSRNSPLD 2062
Score = 29.6 bits (65), Expect = 5.6
Identities = 45/207 (21%), Positives = 78/207 (37%), Gaps = 34/207 (16%)
Query: 224 SDHKEMMEEPGD-SQQPGYS-QWGWLLPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPT 281
S H + PG SQ+P Q + P + P P +++PST YP
Sbjct: 2103 SAHSNQQQPPGSVSQEPRPPLQQSQVPPPEVRMTVP--PLATSSAPVAVPSTAPVT-YPM 2159
Query: 282 LRSHRSSPYPSPY--------------AHRNNSPTYSDNSPACLSM---LQSHDNWSSLG 324
++ P P+P A NS + ++S A LS+ + H SS+
Sbjct: 2160 PQTPMGCPQPTPKMETPAIRPPPHGTTAPHKNSASVQNSSVAVLSVNHIKRPHSVPSSVQ 2219
Query: 325 MPA------------HPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGSQAAAVSNGLG 372
+P+ HP+ P++ N S P + +L+ S + + VS+
Sbjct: 2220 LPSTLSTQSACQNSVHPANKPIAPNFSAPLPFGPFSTLFENSPTSAHAFWGGSVVSSQST 2279
Query: 373 AQFFRGSPAHYTPLTHPVSAPSSSGSP 399
+ + Y P + P+ +S +P
Sbjct: 2280 PESMLSGKSSYLPNSDPLHQSDTSKAP 2306
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,572,634
Number of Sequences: 37866
Number of extensions: 1112005
Number of successful extensions: 3143
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 2874
Number of HSP's gapped (non-prelim): 330
length of query: 435
length of database: 18,247,518
effective HSP length: 105
effective length of query: 330
effective length of database: 14,271,588
effective search space: 4709624040
effective search space used: 4709624040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.