Search of human proteins with 4506383

Search of human proteins with 4506383

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4506383 RAD17 homolog isoform 1 [Homo sapiens]
         (670 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19718796 RAD17 homolog isoform 1 [Homo sapiens]                   1351   0.0  
gi|19718794 RAD17 homolog isoform 1 [Homo sapiens]                   1351   0.0  
gi|19718792 RAD17 homolog isoform 1 [Homo sapiens]                   1351   0.0  
gi|19718784 RAD17 homolog isoform 1 [Homo sapiens]                   1351   0.0  
gi|4506383 RAD17 homolog isoform 1 [Homo sapiens]                    1351   0.0  
gi|19718786 RAD17 homolog isoform 2 [Homo sapiens]                   1345   0.0  
gi|19718790 RAD17 homolog isoform 4 [Homo sapiens]                   1171   0.0  
gi|19718788 RAD17 homolog isoform 3 [Homo sapiens]                   1013   0.0  
gi|6677723 replication factor C 5 isoform 1 [Homo sapiens]             54   5e-07
gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]      51   4e-06
gi|194306571 replication factor C 5 isoform 2 [Homo sapiens]           46   1e-04
gi|194306567 replication factor C 5 isoform 2 [Homo sapiens]           46   1e-04
gi|32528306 replication factor C large subunit [Homo sapiens]          45   3e-04
gi|31563534 replication factor C 2 isoform 1 [Homo sapiens]            42   0.001
gi|18426904 Werner helicase interacting protein isoform 2 [Homo ...    41   0.004
gi|31881687 replication factor C 4 [Homo sapiens]                      40   0.005
gi|4506491 replication factor C 4 [Homo sapiens]                       40   0.005
gi|28882049 replication factor C 2 isoform 2 [Homo sapiens]            40   0.007
gi|108773789 replication factor C 3 isoform 2 [Homo sapiens]           39   0.020
gi|4506489 replication factor C 3 isoform 1 [Homo sapiens]             39   0.020
gi|18426902 Werner helicase interacting protein isoform 1 [Homo ...    36   0.13 
gi|55770834 centromere protein F [Homo sapiens]                        35   0.29 
gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens]      33   0.65 
gi|27501458 CTF18, chromosome transmission fidelity factor 18 ho...    33   0.85 
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom...    33   1.1  
gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens]                  33   1.1  
gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens]                  33   1.1  
gi|157671927 spermatogenesis associated 5 [Homo sapiens]               32   1.5  
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]            32   1.9  
gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo sa...    32   1.9  

>gi|19718796 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 670/670 (100%), Positives = 670/670 (100%)

Query: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60
           MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS
Sbjct: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60

Query: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120
           LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS
Sbjct: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120

Query: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180
           ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS
Sbjct: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180

Query: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240
           QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR
Sbjct: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240

Query: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300
           CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG
Sbjct: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300

Query: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360
           GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR
Sbjct: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360

Query: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420
           RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL
Sbjct: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420

Query: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480
           LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR
Sbjct: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480

Query: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540
           EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC
Sbjct: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540

Query: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600
           LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP
Sbjct: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600

Query: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660
           DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI
Sbjct: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660

Query: 661 IIEDYESDGT 670
           IIEDYESDGT
Sbjct: 661 IIEDYESDGT 670


>gi|19718794 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 670/670 (100%), Positives = 670/670 (100%)

Query: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60
           MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS
Sbjct: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60

Query: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120
           LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS
Sbjct: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120

Query: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180
           ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS
Sbjct: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180

Query: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240
           QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR
Sbjct: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240

Query: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300
           CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG
Sbjct: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300

Query: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360
           GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR
Sbjct: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360

Query: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420
           RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL
Sbjct: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420

Query: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480
           LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR
Sbjct: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480

Query: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540
           EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC
Sbjct: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540

Query: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600
           LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP
Sbjct: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600

Query: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660
           DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI
Sbjct: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660

Query: 661 IIEDYESDGT 670
           IIEDYESDGT
Sbjct: 661 IIEDYESDGT 670


>gi|19718792 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 670/670 (100%), Positives = 670/670 (100%)

Query: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60
           MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS
Sbjct: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60

Query: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120
           LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS
Sbjct: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120

Query: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180
           ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS
Sbjct: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180

Query: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240
           QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR
Sbjct: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240

Query: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300
           CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG
Sbjct: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300

Query: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360
           GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR
Sbjct: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360

Query: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420
           RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL
Sbjct: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420

Query: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480
           LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR
Sbjct: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480

Query: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540
           EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC
Sbjct: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540

Query: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600
           LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP
Sbjct: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600

Query: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660
           DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI
Sbjct: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660

Query: 661 IIEDYESDGT 670
           IIEDYESDGT
Sbjct: 661 IIEDYESDGT 670


>gi|19718784 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 670/670 (100%), Positives = 670/670 (100%)

Query: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60
           MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS
Sbjct: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60

Query: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120
           LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS
Sbjct: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120

Query: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180
           ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS
Sbjct: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180

Query: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240
           QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR
Sbjct: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240

Query: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300
           CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG
Sbjct: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300

Query: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360
           GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR
Sbjct: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360

Query: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420
           RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL
Sbjct: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420

Query: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480
           LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR
Sbjct: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480

Query: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540
           EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC
Sbjct: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540

Query: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600
           LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP
Sbjct: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600

Query: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660
           DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI
Sbjct: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660

Query: 661 IIEDYESDGT 670
           IIEDYESDGT
Sbjct: 661 IIEDYESDGT 670


>gi|4506383 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 670/670 (100%), Positives = 670/670 (100%)

Query: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60
           MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS
Sbjct: 1   MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSS 60

Query: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120
           LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS
Sbjct: 61  LEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120

Query: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180
           ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS
Sbjct: 121 ILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQS 180

Query: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240
           QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR
Sbjct: 181 QIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGR 240

Query: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300
           CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG
Sbjct: 241 CPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNG 300

Query: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360
           GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR
Sbjct: 301 GKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKR 360

Query: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420
           RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL
Sbjct: 361 RKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTL 420

Query: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480
           LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR
Sbjct: 421 LVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLR 480

Query: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540
           EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC
Sbjct: 481 EYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFC 540

Query: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600
           LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP
Sbjct: 541 LPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDP 600

Query: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660
           DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI
Sbjct: 601 DSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENI 660

Query: 661 IIEDYESDGT 670
           IIEDYESDGT
Sbjct: 661 IIEDYESDGT 670


>gi|19718786 RAD17 homolog isoform 2 [Homo sapiens]
          Length = 681

 Score = 1345 bits (3481), Expect = 0.0
 Identities = 667/668 (99%), Positives = 668/668 (100%)

Query: 3   QVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLE 62
           +VTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLE
Sbjct: 14  KVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLE 73

Query: 63  QIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSIL 122
           QIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSIL
Sbjct: 74  QIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSIL 133

Query: 123 LITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQI 182
           LITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQI
Sbjct: 134 LITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQI 193

Query: 183 AVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCP 242
           AVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCP
Sbjct: 194 AVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCP 253

Query: 243 LIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGK 302
           LIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGK
Sbjct: 254 LIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGK 313

Query: 303 ITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRK 362
           ITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRK
Sbjct: 314 ITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRK 373

Query: 363 KPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTLLV 422
           KPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTLLV
Sbjct: 374 KPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTLLV 433

Query: 423 EPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREY 482
           EPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREY
Sbjct: 434 EPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREY 493

Query: 483 STSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFCLP 542
           STSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFCLP
Sbjct: 494 STSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCLAAKALFPDFCLP 553

Query: 543 ALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDS 602
           ALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDS
Sbjct: 554 ALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDS 613

Query: 603 GDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENIII 662
           GDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENIII
Sbjct: 614 GDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSAQGDMEENIII 673

Query: 663 EDYESDGT 670
           EDYESDGT
Sbjct: 674 EDYESDGT 681


>gi|19718790 RAD17 homolog isoform 4 [Homo sapiens]
          Length = 584

 Score = 1171 bits (3030), Expect = 0.0
 Identities = 582/582 (100%), Positives = 582/582 (100%)

Query: 89  QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 148
           QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ
Sbjct: 3   QHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQ 62

Query: 149 EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 208
           EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD
Sbjct: 63  EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTD 122

Query: 209 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 268
           KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE
Sbjct: 123 KKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEE 182

Query: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
           CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS
Sbjct: 183 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 242

Query: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 388
           LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA
Sbjct: 243 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRA 302

Query: 389 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 448
           LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID
Sbjct: 303 LGKILYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYID 362

Query: 449 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 508
           FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS
Sbjct: 363 FFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS 422

Query: 509 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 568
           SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS
Sbjct: 423 SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQIS 482

Query: 569 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 628
           FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE
Sbjct: 483 FIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPE 542

Query: 629 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 670
           TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 543 TWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT 584


>gi|19718788 RAD17 homolog isoform 3 [Homo sapiens]
          Length = 505

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 166 MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 225
           MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60

Query: 226 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 285
           HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120

Query: 286 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 345
           KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180

Query: 346 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 405
           GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240

Query: 406 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 465
           PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300

Query: 466 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 525
           ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360

Query: 526 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 585
           RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420

Query: 586 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 645
           KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480

Query: 646 QPQPFSAQGDMEENIIIEDYESDGT 670
           QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 481 QPQPFSAQGDMEENIIIEDYESDGT 505


>gi|6677723 replication factor C 5 isoform 1 [Homo sapiens]
          Length = 340

 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 51/254 (20%)

Query: 77  NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
           N PWV+KY+P+T ++L  H+  +  ++ ++    L          LL+ GPPG GKT+T+
Sbjct: 19  NLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPH--------LLLYGPPGTGKTSTI 70

Query: 137 KILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYN 196
              +K+  +   +    ++ +    D +G+        +  + S   +FK+         
Sbjct: 71  LACAKQ--LYKDKEFGSMVLELNASDDRGIDIIRGP--ILSFASTRTIFKKGF------- 119

Query: 197 KLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNN 256
                        K++++++         + L  V+ K+    R  LI          N 
Sbjct: 120 -------------KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLIC---------NY 157

Query: 257 QRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
              + P  +Q  C  +   F P+ P +M+  L  +V  E      K+ +  +  ++ L  
Sbjct: 158 LSKIIP-ALQSRC--TRFRFGPLTPELMVPRLEHVVEEE------KVDI-SEDGMKALVT 207

Query: 317 GCSGDIRSAINSLQ 330
             SGD+R A+N LQ
Sbjct: 208 LSSGDMRRALNILQ 221


>gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]
          Length = 1844

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 34/151 (22%)

Query: 33   NSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYG--LENSKEYLSENEPWVDKYKPETQH 90
            NS  +RK      ++     RK   LS      G  L++SK+  +E+  W +KY+P+T  
Sbjct: 1005 NSKSKRKKPNEYSKNLEKTNRKSEELSKRNNSSGIKLDSSKDSGTEDMLWTEKYQPQTAS 1064

Query: 91   ELAVHKKKIEEVETWLK-----AQVLERQPKQG----------GSI-------------- 121
            EL  ++  I+++ +WLK     A++ ERQ  +G          G I              
Sbjct: 1065 ELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDEKHEDFSGGIDFKGSSDDEEESRL 1124

Query: 122  ---LLITGPPGCGKTTTLKILSKEHGIQVQE 149
               +LITGP G GKT  +   ++E G ++ E
Sbjct: 1125 CNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155


>gi|194306571 replication factor C 5 isoform 2 [Homo sapiens]
          Length = 319

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 52/250 (20%), Positives = 102/250 (40%), Gaps = 51/250 (20%)

Query: 81  VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
           V+KY+P+T ++L  H+  +  ++ ++    L          LL+ GPPG GKT+T+   +
Sbjct: 2   VEKYRPQTLNDLISHQDILSTIQKFINEDRLPH--------LLLYGPPGTGKTSTILACA 53

Query: 141 KEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQM 200
           K+  +   +    ++ +    D +G+        +  + S   +FK+             
Sbjct: 54  KQ--LYKDKEFGSMVLELNASDDRGIDIIRGP--ILSFASTRTIFKKGF----------- 98

Query: 201 LGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLL 260
                    K++++++         + L  V+ K+    R  LI          N    +
Sbjct: 99  ---------KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLIC---------NYLSKI 140

Query: 261 FPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSG 320
            P  +Q  C  +   F P+ P +M+  L  +V  E      K+ +  +  ++ L    SG
Sbjct: 141 IP-ALQSRC--TRFRFGPLTPELMVPRLEHVVEEE------KVDI-SEDGMKALVTLSSG 190

Query: 321 DIRSAINSLQ 330
           D+R A+N LQ
Sbjct: 191 DMRRALNILQ 200


>gi|194306567 replication factor C 5 isoform 2 [Homo sapiens]
          Length = 319

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 52/250 (20%), Positives = 102/250 (40%), Gaps = 51/250 (20%)

Query: 81  VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
           V+KY+P+T ++L  H+  +  ++ ++    L          LL+ GPPG GKT+T+   +
Sbjct: 2   VEKYRPQTLNDLISHQDILSTIQKFINEDRLPH--------LLLYGPPGTGKTSTILACA 53

Query: 141 KEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQM 200
           K+  +   +    ++ +    D +G+        +  + S   +FK+             
Sbjct: 54  KQ--LYKDKEFGSMVLELNASDDRGIDIIRGP--ILSFASTRTIFKKGF----------- 98

Query: 201 LGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLL 260
                    K++++++         + L  V+ K+    R  LI          N    +
Sbjct: 99  ---------KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLIC---------NYLSKI 140

Query: 261 FPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSG 320
            P  +Q  C  +   F P+ P +M+  L  +V  E      K+ +  +  ++ L    SG
Sbjct: 141 IP-ALQSRC--TRFRFGPLTPELMVPRLEHVVEEE------KVDI-SEDGMKALVTLSSG 190

Query: 321 DIRSAINSLQ 330
           D+R A+N LQ
Sbjct: 191 DMRRALNILQ 200


>gi|32528306 replication factor C large subunit [Homo sapiens]
          Length = 1147

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 18/100 (18%)

Query: 68  ENSKEYLSENEPWVDKYKPET-------QHELAVHKKKIEEVETWLKAQVLERQPKQGGS 120
           ++S E   EN  WVDKYKP +       Q + +   K +  +  W K+   +++  + G 
Sbjct: 574 DDSSENKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQKSSSEDKKHAKFGK 633

Query: 121 I-----------LLITGPPGCGKTTTLKILSKEHGIQVQE 149
                        L++GPPG GKTTT  ++ +E G    E
Sbjct: 634 FSGKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVE 673


>gi|31563534 replication factor C 2 isoform 1 [Homo sapiens]
          Length = 354

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 50/256 (19%), Positives = 102/256 (39%), Gaps = 51/256 (19%)

Query: 79  PWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKI 138
           PWV+KY+P   +E+  ++  +  +E + +   +          ++I GPPG GKTT++  
Sbjct: 37  PWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPN--------IIIAGPPGTGKTTSILC 88

Query: 139 LSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKL 198
           L++         + P L D   +      N  +   +   +++I +F +  +   K    
Sbjct: 89  LAR-------ALLGPALKDAMLE-----LNASNDRGIDVVRNKIKMFAQQKVTLPKGR-- 134

Query: 199 QMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQR 258
                      KII++++  +        L   +  Y +  R  L    SD +       
Sbjct: 135 ----------HKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKII------ 178

Query: 259 LLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGC 318
               + IQ  C++  + +  +    ++  L  ++  E      ++   D   LE +    
Sbjct: 179 ----EPIQSRCAV--LRYTKLTDAQILTRLMNVIEKE------RVPYTD-DGLEAIIFTA 225

Query: 319 SGDIRSAINSLQFSSS 334
            GD+R A+N+LQ + S
Sbjct: 226 QGDMRQALNNLQSTFS 241


>gi|18426904 Werner helicase interacting protein isoform 2 [Homo
           sapiens]
          Length = 640

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 15/146 (10%)

Query: 76  ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
           + +P  D  +P+T  +     K + + +T L++ +   +       L++ GPPGCGKTT 
Sbjct: 223 QGKPLADTMRPDTLQDYFGQSKAVGQ-DTLLRSLLETNEIPS----LILWGPPGCGKTTL 277

Query: 136 LKIL---SKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRA 192
             I+   SK+H I+   ++     + + +D + +     +   F  +  I     F+   
Sbjct: 278 AHIIASNSKKHSIR---FVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTIL----FIDEI 330

Query: 193 TKYNKLQMLGDDLRTDKKIILVEDLP 218
            ++NK Q +   L +  ++I++E LP
Sbjct: 331 HRFNKSQQVNAALLSRCRVIVLEKLP 356


>gi|31881687 replication factor C 4 [Homo sapiens]
          Length = 363

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 8/64 (12%)

Query: 79  PWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKI 138
           PWV+KY+P+   E+A  ++ +  ++  L+   L          LL  GPPG GKT+T+  
Sbjct: 39  PWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPN--------LLFYGPPGTGKTSTILA 90

Query: 139 LSKE 142
            ++E
Sbjct: 91  AARE 94


>gi|4506491 replication factor C 4 [Homo sapiens]
          Length = 363

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 8/64 (12%)

Query: 79  PWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKI 138
           PWV+KY+P+   E+A  ++ +  ++  L+   L          LL  GPPG GKT+T+  
Sbjct: 39  PWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPN--------LLFYGPPGTGKTSTILA 90

Query: 139 LSKE 142
            ++E
Sbjct: 91  AARE 94


>gi|28882049 replication factor C 2 isoform 2 [Homo sapiens]
          Length = 320

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 8/63 (12%)

Query: 79  PWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKI 138
           PWV+KY+P   +E+  ++  +  +E + +   +          ++I GPPG GKTT++  
Sbjct: 37  PWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPN--------IIIAGPPGTGKTTSILC 88

Query: 139 LSK 141
           L++
Sbjct: 89  LAR 91


>gi|108773789 replication factor C 3 isoform 2 [Homo sapiens]
          Length = 305

 Score = 38.5 bits (88), Expect = 0.020
 Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 26/175 (14%)

Query: 80  WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
           WVDKY+P +   L  HK++  ++   ++              LL+ GP G GK T +  +
Sbjct: 4   WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPH--------LLVYGPSGAGKKTRIMCI 55

Query: 140 SKE-HGIQVQ----EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQI-----AVFKEFL 189
            +E +G+ V+    E      P  +K +        S++H+    S        V +E L
Sbjct: 56  LRELYGVGVEKLRIEHQTITTPSKKKIEIS---TIASNYHLEVNPSDAGNSDRVVIQEML 112

Query: 190 LRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLI 244
                  + Q L  + + D K++L+ ++        H L   + KY  +  C LI
Sbjct: 113 KTVA---QSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKY--MSTCRLI 162


>gi|4506489 replication factor C 3 isoform 1 [Homo sapiens]
          Length = 356

 Score = 38.5 bits (88), Expect = 0.020
 Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 26/175 (14%)

Query: 80  WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
           WVDKY+P +   L  HK++  ++   ++              LL+ GP G GK T +  +
Sbjct: 4   WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPH--------LLVYGPSGAGKKTRIMCI 55

Query: 140 SKE-HGIQVQ----EWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQI-----AVFKEFL 189
            +E +G+ V+    E      P  +K +        S++H+    S        V +E L
Sbjct: 56  LRELYGVGVEKLRIEHQTITTPSKKKIEIS---TIASNYHLEVNPSDAGNSDRVVIQEML 112

Query: 190 LRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLI 244
                  + Q L  + + D K++L+ ++        H L   + KY  +  C LI
Sbjct: 113 KTVA---QSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKY--MSTCRLI 162


>gi|18426902 Werner helicase interacting protein isoform 1 [Homo
           sapiens]
          Length = 665

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 8/74 (10%)

Query: 76  ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
           + +P  D  +P+T  +     K + + +T L++ +   +       L++ GPPGCGKTT 
Sbjct: 223 QGKPLADTMRPDTLQDYFGQSKAVGQ-DTLLRSLLETNEIPS----LILWGPPGCGKTTL 277

Query: 136 LKIL---SKEHGIQ 146
             I+   SK+H I+
Sbjct: 278 AHIIASNSKKHSIR 291


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 54   KRGNLSSLEQIYGLENS------KEYLSENEPWVDKYKP---ETQHELAVHKKKIEEVET 104
            K   +  LEQ+   E        K+YLSENE W  K      E + +LA  KK+ E++  
Sbjct: 1577 KNKEIQELEQLLSSERQELDCLRKQYLSENEQWQQKLTSVTLEMESKLAAEKKQTEQLSL 1636

Query: 105  WLKAQVLERQ 114
             L+   L+ Q
Sbjct: 1637 ELEVARLQLQ 1646


>gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens]
          Length = 361

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)

Query: 114 QPKQGGSILLITGPPGCGKTTTLKILSKEHG 144
           QP +G   +L+ GPPGCGKT   K  +KE G
Sbjct: 124 QPPKG---VLLYGPPGCGKTLIAKATAKEAG 151


>gi|27501458 CTF18, chromosome transmission fidelity factor 18
           homolog [Homo sapiens]
          Length = 975

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 113 RQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQE 149
           ++PKQ   + L+ GPPG GKTT   ++++  G  V E
Sbjct: 363 QRPKQ--KVALLCGPPGLGKTTLAHVIARHAGYSVVE 397



 Score = 33.1 bits (74), Expect = 0.85
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)

Query: 281 PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNL 340
           PT+  + + R+  +   +        D   L  LC+    DIR+ IN+LQF  S+G+  L
Sbjct: 512 PTLPSRLVQRLQEVSLRQG----MRADPGVLAALCEKTDNDIRACINTLQFLYSRGQREL 567

Query: 341 RPR 343
             R
Sbjct: 568 SVR 570


>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
            sapiens]
          Length = 1911

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 3/37 (8%)

Query: 113  RQPKQGGSI---LLITGPPGCGKTTTLKILSKEHGIQ 146
            RQPK   ++   ++I GPP  GKTT  K ++ E+G++
Sbjct: 1402 RQPKPKPTVPIRIIIVGPPKSGKTTVAKKITSEYGLK 1438


>gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens]
          Length = 750

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 122 LLITGPPGCGKTTTLKILSKEHGI 145
           +L+ GPPGCGKT   K ++ E G+
Sbjct: 512 VLLAGPPGCGKTLLAKAVANESGL 535


>gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens]
          Length = 856

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 122 LLITGPPGCGKTTTLKILSKEHGI 145
           +L+ GPPGCGKT   K ++ E G+
Sbjct: 618 VLLAGPPGCGKTLLAKAVANESGL 641


>gi|157671927 spermatogenesis associated 5 [Homo sapiens]
          Length = 893

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)

Query: 114 QPKQGGSILLITGPPGCGKTTTLKILSKEHGI 145
           QP +G   +L+ GPPGC KT   K L+ E G+
Sbjct: 659 QPPKG---VLLYGPPGCSKTMIAKALANESGL 687



 Score = 30.8 bits (68), Expect = 4.2
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 16/141 (11%)

Query: 19  SGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENE 78
           SG+     T L  N  S R  N   T E  R      G   + +  Y + ++      N 
Sbjct: 279 SGLMLEEVTGLKCNFESAREGNEQLT-EEERLLKFSIGAKCNTDTFYFISSTTRV---NF 334

Query: 79  PWVDKYKPETQHELAVHKKKIEEVETWLKA--QVLE---RQPKQGGSI-------LLITG 126
             +DK   E  ++  V    I  + + LKA  +++E   +QP+   S        +L+ G
Sbjct: 335 TEIDKNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYG 394

Query: 127 PPGCGKTTTLKILSKEHGIQV 147
           PPG GKT   + ++ E G  V
Sbjct: 395 PPGTGKTMIARAVANEVGAYV 415


>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
          Length = 980

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 118 GGSILLITGPPGCGKTTTLKILSKEHGIQV 147
           G S +L+ GPPGCGKTT +       G+ +
Sbjct: 462 GTSSVLLRGPPGCGKTTVVAAACSHLGLHL 491


>gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo
           sapiens]
          Length = 740

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 14/22 (63%), Positives = 17/22 (77%)

Query: 119 GSILLITGPPGCGKTTTLKILS 140
           G  LLITGP GCGK++  +ILS
Sbjct: 504 GMHLLITGPNGCGKSSLFRILS 525


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,861,105
Number of Sequences: 37866
Number of extensions: 1166758
Number of successful extensions: 3849
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 3776
Number of HSP's gapped (non-prelim): 95
length of query: 670
length of database: 18,247,518
effective HSP length: 109
effective length of query: 561
effective length of database: 14,120,124
effective search space: 7921389564
effective search space used: 7921389564
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.