Guide to the Human Genome
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Name: RFC3 Sequence: fasta or formatted (356aa) NCBI GI: 4506489
Description:

replication factor C 3 isoform 1

Referenced in:

Replication Proteins

Other entries for this name:
alt prot [305aa] replication factor C 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         24           2
 C cysteine            3.9         14           2
 D aspartate           3.7         13           1
 E glutamate           7.6         27           1
 F phenylalanine       2.0          7           1
 G glycine             4.5         16           1
 H histidine           3.1         11           1
 I isoleucine          5.3         19           2
 K lysine              6.7         24           3
 L leucine            12.4         44           2
 M methionine          3.4         12           2
 N asparagine          2.8         10           1
 P proline             4.2         15           2
 Q glutamine           5.6         20           2
 R arginine            6.5         23           2
 S serine              5.9         21           1
 T threonine           5.1         18           2
 V valine              6.5         23           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   replication factor C 3 isoform 1 
RFC3                  0.821   replication factor C 3 isoform 2 
RFC4                  0.127   replication factor C 4 
RFC4                  0.127   replication factor C 4 
RFC5                  0.114   replication factor C 5 isoform 1 
RFC2                  0.113   replication factor C 2 isoform 1 
RFC5                  0.108   replication factor C 5 isoform 2 
RFC5                  0.108   replication factor C 5 isoform 2 
RFC5                  0.066   replication factor C 5 isoform 3 
RFC2                  0.048   replication factor C 2 isoform 2 
RAD17                 0.020   RAD17 homolog isoform 1 
RAD17                 0.020   RAD17 homolog isoform 1 
RAD17                 0.020   RAD17 homolog isoform 1 
RAD17                 0.020   RAD17 homolog isoform 1 
RAD17                 0.020   RAD17 homolog isoform 1 
RAD17                 0.020   RAD17 homolog isoform 2 
WRNIP1                0.009   Werner helicase interacting protein isoform 2 
WRNIP1                0.009   Werner helicase interacting protein isoform 1 
ABCB6                 0.007   ATP-binding cassette, sub-family B, member 6 
DNAH5                 0.006   dynein, axonemal, heavy chain 5 
CXCL9                 0.006   small inducible cytokine B9 precursor 
GPBAR1                0.006   G protein-coupled bile acid receptor 1 
GPBAR1                0.006   G protein-coupled bile acid receptor 1 
GPBAR1                0.006   G protein-coupled bile acid receptor 1 
DPYD                  0.004   dihydropyrimidine dehydrogenase isoform 1 
GPR64                 0.004   G protein-coupled receptor 64 isoform 3 
GPR64                 0.004   G protein-coupled receptor 64 isoform 2 
GPR64                 0.004   G protein-coupled receptor 64 isoform 1 
GPR64                 0.004   G protein-coupled receptor 64 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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