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Search of human proteins with 4506137
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506137 proline rich Gla (G-carboxyglutamic acid) 2 [Homo
sapiens]
(202 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506137 proline rich Gla (G-carboxyglutamic acid) 2 [Homo sap... 432 e-122
gi|13129074 proline rich Gla (G-carboxyglutamic acid) 4 (transme... 110 1e-24
gi|215422383 proline rich Gla (G-carboxyglutamic acid) 1 [Homo s... 70 2e-12
gi|4506135 proline rich Gla (G-carboxyglutamic acid) 1 [Homo sap... 70 2e-12
gi|31543811 proline rich Gla (G-carboxyglutamic acid) 3 (transme... 67 1e-11
gi|4503635 coagulation factor II preproprotein [Homo sapiens] 64 7e-11
gi|4503649 coagulation factor IX preproprotein [Homo sapiens] 62 4e-10
gi|4503625 coagulation factor X preproprotein [Homo sapiens] 62 4e-10
gi|10518503 coagulation factor VII isoform b precursor [Homo sap... 60 1e-09
gi|4503645 coagulation factor VII isoform a precursor [Homo sapi... 59 3e-09
gi|4506121 protein Z, vitamin K-dependent plasma glycoprotein [H... 58 5e-09
gi|157168329 formin 1 [Homo sapiens] 53 2e-07
gi|4557617 growth arrest-specific 6 isoform 1 precursor [Homo sa... 51 8e-07
gi|192447438 protein S, alpha preproprotein [Homo sapiens] 49 2e-06
gi|55741677 SET domain containing 1A [Homo sapiens] 46 2e-05
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 46 2e-05
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 45 3e-05
gi|52485606 formin-like 2 [Homo sapiens] 45 4e-05
gi|195947369 junction-mediating and regulatory protein [Homo sap... 45 5e-05
gi|4506115 protein C [Homo sapiens] 44 9e-05
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 44 9e-05
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 44 9e-05
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 44 9e-05
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 44 1e-04
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 44 1e-04
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 43 2e-04
gi|47132519 Ras association and pleckstrin homology domains 1 is... 43 2e-04
gi|210032580 SET domain containing 1B [Homo sapiens] 43 2e-04
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 42 3e-04
>gi|4506137 proline rich Gla (G-carboxyglutamic acid) 2 [Homo
sapiens]
Length = 202
Score = 432 bits (1111), Expect = e-122
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MRGHPSLLLLYMALTTCLDTSPSEETDQEVFLGPPEAQSFLSSHTRIPRANHWDLELLTP 60
MRGHPSLLLLYMALTTCLDTSPSEETDQEVFLGPPEAQSFLSSHTRIPRANHWDLELLTP
Sbjct: 1 MRGHPSLLLLYMALTTCLDTSPSEETDQEVFLGPPEAQSFLSSHTRIPRANHWDLELLTP 60
Query: 61 GNLERECLEERCSWEEAREYFEDNTLTERFWESYIYNGKGGRGRVDVASLAVGLTGGILL 120
GNLERECLEERCSWEEAREYFEDNTLTERFWESYIYNGKGGRGRVDVASLAVGLTGGILL
Sbjct: 61 GNLERECLEERCSWEEAREYFEDNTLTERFWESYIYNGKGGRGRVDVASLAVGLTGGILL 120
Query: 121 IVLAGLGAFWYLRWRQHRGQQPCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQ 180
IVLAGLGAFWYLRWRQHRGQQPCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQ
Sbjct: 121 IVLAGLGAFWYLRWRQHRGQQPCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQ 180
Query: 181 ALAASGVHDAPPPPYTSLRRPH 202
ALAASGVHDAPPPPYTSLRRPH
Sbjct: 181 ALAASGVHDAPPPPYTSLRRPH 202
>gi|13129074 proline rich Gla (G-carboxyglutamic acid) 4
(transmembrane) [Homo sapiens]
Length = 226
Score = 110 bits (274), Expect = 1e-24
Identities = 74/190 (38%), Positives = 98/190 (51%), Gaps = 27/190 (14%)
Query: 23 SEETDQEVFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYFE 82
S+ +EVF EA F+ H R+ N +DLEL TPGNLEREC EE C++EEARE F
Sbjct: 28 SKHAGEEVFTSKEEANFFI--HRRL-LYNRFDLELFTPGNLERECNEELCNYEEAREIFV 84
Query: 83 DNTLTERFWESYIYNG-----KGGRGRVDVASLAVGLTGGILLIVLAGLGAFWYLRWRQH 137
D T FW+ Y G G R ++DV L GL + +V+ GL ++ + +
Sbjct: 85 DEDKTIAFWQEYSAKGPTTKSDGNREKIDVMGLLTGLIAAGVFLVIFGLLGYYLCITKCN 144
Query: 138 RGQQPCPQ---EAGLISPL--------SPLNPLGPPTPLPPPPPPPPGLPTYEQALAASG 186
R Q PC E G +P + L+PL PP GLP+YEQA+A +
Sbjct: 145 RLQHPCSSAVYERGRHTPSIIFRRPEEAALSPL-------PPSVEDAGLPSYEQAVALTR 197
Query: 187 VHD-APPPPY 195
H +PPPPY
Sbjct: 198 KHSVSPPPPY 207
>gi|215422383 proline rich Gla (G-carboxyglutamic acid) 1 [Homo
sapiens]
Length = 218
Score = 69.7 bits (169), Expect = 2e-12
Identities = 65/206 (31%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 30 VFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTER 89
VFL +A S L R PRAN + E + GN+EREC EE C++EEARE FE+N T+
Sbjct: 4 VFLTGEKANSILK---RYPRANGF-FEEIRQGNIERECKEEFCTFEEAREAFENNEKTKE 59
Query: 90 FWESYIYNGKGGRGRVD---VASLAVGLTGGILLIVLAGLGAFW--YLRWRQHR-----G 139
FW +Y +G R L L G+ +I+L + W +LR + R G
Sbjct: 60 FWSTYTKAQQGESNRGSDWFQFYLTFPLIFGLFIILLV-IFLIWRCFLRNKTRRQTVTEG 118
Query: 140 QQPCPQEAGLISPLSPLNPLGPPTPLPP--------------------PPPPPPGLPTYE 179
P PQ +I+P P + + + L P PP PTYE
Sbjct: 119 HIPFPQHLNIITPPPPPDEVFDSSGLSPGFLGYVVGRSDSVSTRLSNCDPP-----PTYE 173
Query: 180 QALAASGV-------HDAPPPPYTSL 198
+A + H PPP Y +
Sbjct: 174 EATGQVNLQRSETEPHLDPPPEYEDI 199
>gi|4506135 proline rich Gla (G-carboxyglutamic acid) 1 [Homo
sapiens]
Length = 218
Score = 69.7 bits (169), Expect = 2e-12
Identities = 65/206 (31%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 30 VFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTER 89
VFL +A S L R PRAN + E + GN+EREC EE C++EEARE FE+N T+
Sbjct: 4 VFLTGEKANSILK---RYPRANGF-FEEIRQGNIERECKEEFCTFEEAREAFENNEKTKE 59
Query: 90 FWESYIYNGKGGRGRVD---VASLAVGLTGGILLIVLAGLGAFW--YLRWRQHR-----G 139
FW +Y +G R L L G+ +I+L + W +LR + R G
Sbjct: 60 FWSTYTKAQQGESNRGSDWFQFYLTFPLIFGLFIILLV-IFLIWRCFLRNKTRRQTVTEG 118
Query: 140 QQPCPQEAGLISPLSPLNPLGPPTPLPP--------------------PPPPPPGLPTYE 179
P PQ +I+P P + + + L P PP PTYE
Sbjct: 119 HIPFPQHLNIITPPPPPDEVFDSSGLSPGFLGYVVGRSDSVSTRLSNCDPP-----PTYE 173
Query: 180 QALAASGV-------HDAPPPPYTSL 198
+A + H PPP Y +
Sbjct: 174 EATGQVNLQRSETEPHLDPPPEYEDI 199
>gi|31543811 proline rich Gla (G-carboxyglutamic acid) 3
(transmembrane) [Homo sapiens]
Length = 231
Score = 67.0 bits (162), Expect = 1e-11
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 30 VFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTER 89
VFL +A S L R PRAN + LE L G +EREC+EE CS+EE +E FE+ T
Sbjct: 3 VFLEAKDAHSVLK---RFPRANEF-LEELRQGTIERECMEEICSYEEVKEVFENKEKTME 58
Query: 90 FWESY---IYNGKGGRGRVDVASLAVGLTGGILLIVLA 124
FW+ Y +Y+ + D + V L G LLIV+A
Sbjct: 59 FWKGYPNAVYSVRDPSQSSDAMYVVVPLLGVALLIVIA 96
>gi|4503635 coagulation factor II preproprotein [Homo sapiens]
Length = 622
Score = 64.3 bits (155), Expect = 7e-11
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 28 QEVFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLT 87
Q VFL P +A+S L R+ RAN + LE + GNLEREC+EE CS+EEA E E +T T
Sbjct: 25 QHVFLAPQQARSLLQ---RVRRANTF-LEEVRKGNLERECVEETCSYEEAFEALESSTAT 80
Query: 88 ERFWESY 94
+ FW Y
Sbjct: 81 DVFWAKY 87
>gi|4503649 coagulation factor IX preproprotein [Homo sapiens]
Length = 461
Score = 61.6 bits (148), Expect = 4e-10
Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 30 VFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTER 89
VFL A L+ R R N LE GNLEREC+EE+CS+EEARE FE+ T
Sbjct: 30 VFLDHENANKILN---RPKRYNSGKLEEFVQGNLERECMEEKCSFEEAREVFENTERTTE 86
Query: 90 FWESYI 95
FW+ Y+
Sbjct: 87 FWKQYV 92
>gi|4503625 coagulation factor X preproprotein [Homo sapiens]
Length = 488
Score = 61.6 bits (148), Expect = 4e-10
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 28 QEVFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLT 87
+ +F+ +A + L+ R+ RAN + LE + G+LEREC+EE CS+EEARE FED+ T
Sbjct: 22 ESLFIRREQANNILA---RVTRANSF-LEEMKKGHLERECMEETCSYEEAREVFEDSDKT 77
Query: 88 ERFWESY 94
FW Y
Sbjct: 78 NEFWNKY 84
>gi|10518503 coagulation factor VII isoform b precursor [Homo
sapiens]
Length = 444
Score = 60.1 bits (144), Expect = 1e-09
Identities = 41/88 (46%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 7 LLLLYMALTTCLDTSPSEETDQEVFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERE 66
LL L + L CL VF+ EA L R RAN + LE L PG+LERE
Sbjct: 8 LLCLLLGLQGCLAA---------VFVTQEEAHGVLH---RRRRANAF-LEELRPGSLERE 54
Query: 67 CLEERCSWEEAREYFEDNTLTERFWESY 94
C EE+CS+EEARE F+D T+ FW SY
Sbjct: 55 CKEEQCSFEEAREIFKDAERTKLFWISY 82
>gi|4503645 coagulation factor VII isoform a precursor [Homo
sapiens]
Length = 466
Score = 58.9 bits (141), Expect = 3e-09
Identities = 36/73 (49%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 22 PSEETDQEVFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYF 81
P + VF+ EA L R RAN + LE L PG+LEREC EE+CS+EEARE F
Sbjct: 36 PWKPGPHRVFVTQEEAHGVLH---RRRRANAF-LEELRPGSLERECKEEQCSFEEAREIF 91
Query: 82 EDNTLTERFWESY 94
+D T+ FW SY
Sbjct: 92 KDAERTKLFWISY 104
>gi|4506121 protein Z, vitamin K-dependent plasma glycoprotein [Homo
sapiens]
Length = 400
Score = 58.2 bits (139), Expect = 5e-09
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 27 DQEVFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTL 86
+ VFL +A L R RA + LE L GNLE+EC EE C +EEARE FE+ +
Sbjct: 21 EPSVFLPASKANDVL---VRWKRAGSYLLEELFEGNLEKECYEEICVYEEAREVFENEVV 77
Query: 87 TERFWESYIYNGKGG 101
T+ FW Y KGG
Sbjct: 78 TDEFWRRY----KGG 88
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 52.8 bits (125), Expect = 2e-07
Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPP 194
P P G +SP P+ P+ PLPPPPPPPP LP A G PPPP
Sbjct: 657 PLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSA----GPPPPPPPP 705
Score = 40.8 bits (94), Expect = 8e-04
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPPYTSLRRP 201
P P +GL S LSP P+ P + PP PPPPP P +A PPPP + P
Sbjct: 655 PPPLPSGLGS-LSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAP 713
Score = 38.9 bits (89), Expect = 0.003
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 139 GQQPCPQEAGLISPLSPLNPLGPPTPLPPP---PPPPPGL 175
G P P L + +P NP GPP PPP PPPPPGL
Sbjct: 697 GPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGL 736
Score = 36.2 bits (82), Expect = 0.019
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 13/57 (22%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPP----PPPPGLPTYEQALAASGVHDAPPPP 194
P P PL P + GPP P PPPP P PP G APPPP
Sbjct: 679 PLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPN---------PGGPPPAPPPP 726
Score = 33.5 bits (75), Expect = 0.13
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 161 PPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPP 194
PP +PPPPP P GL + A V PP P
Sbjct: 648 PPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLP 681
Score = 30.8 bits (68), Expect = 0.82
Identities = 18/51 (35%), Positives = 20/51 (39%)
Query: 144 PQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPP 194
P L S L L+P P P+ PP PP P S PPPP
Sbjct: 653 PPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPP 703
>gi|4557617 growth arrest-specific 6 isoform 1 precursor [Homo
sapiens]
Length = 678
Score = 50.8 bits (120), Expect = 8e-07
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 1 MRGHPSLLLLYMALTTCLDTS-PSEETDQEVFLGPPEAQSFLSSHTRIPRANHWDLELLT 59
+R P LLLL +A L P+ E Q FL P + ++F E
Sbjct: 12 LRRAPQLLLLLLAAECALAALLPAREATQ--FLRPRQRRAFQV------------FEEAK 57
Query: 60 PGNLERECLEERCSWEEAREYFEDNTLTERFWESYI 95
G+LEREC+EE CS EEARE FE++ T+ F+ Y+
Sbjct: 58 QGHLERECVEELCSREEAREVFENDPETDYFYPRYL 93
>gi|192447438 protein S, alpha preproprotein [Homo sapiens]
Length = 676
Score = 49.3 bits (116), Expect = 2e-06
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 31 FLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTERF 90
FL +A L R RAN LE GNLEREC+EE C+ EEARE FE++ T+ F
Sbjct: 26 FLSKQQASQVL---VRKRRANSL-LEETKQGNLERECIEELCNKEEAREVFENDPETDYF 81
Query: 91 WESYI 95
+ Y+
Sbjct: 82 YPKYL 86
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 46.2 bits (108), Expect = 2e-05
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 152 PLSPLNPLGPPTPLPPPPPPPP-------GLPTYEQALAASGVHDAPPPP 194
P +P P PP P PPPPPPPP G P ++ A D PPPP
Sbjct: 595 PPAPTPPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPP 644
Score = 35.4 bits (80), Expect = 0.033
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 153 LSPLNPLGPPTP-LPPPPPPPPGLPTYEQAL 182
L P P GPP P PPPPPPPP + + +L
Sbjct: 633 LLPPRPDGPPPPEYPPPPPPPPHIYDFVNSL 663
Score = 33.5 bits (75), Expect = 0.13
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 16/37 (43%)
Query: 161 PPTPLPP--PPPPPPGLPTYEQALAASGVHDAPPPPY 195
PP P PP PPPPPP P PPPPY
Sbjct: 595 PPAPTPPQQPPPPPPPPP--------------PPPPY 617
Score = 30.8 bits (68), Expect = 0.82
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 142 PCP-QEAGLISPLSPLNPLGPPTPLPPPPPP--PPGLPTYEQALAASGVHDAPPP 193
P P QEA P P P PL PP PP PP +S + PPP
Sbjct: 1107 PLPEQEASPARPAGPTEESPPSAPLRPPEPPAGPPAPAPRPDERPSSPIPLLPPP 1161
Score = 29.6 bits (65), Expect = 1.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 144 PQEAGLISPLSPLNPLGPPTPLPPPPPP 171
P + + P P P P P PPPPPP
Sbjct: 627 PHQPAYLLPPRPDGPPPPEYPPPPPPPP 654
Score = 28.1 bits (61), Expect = 5.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 166 PPPPPPPPGLPTYE 179
PPPPPPPP YE
Sbjct: 1403 PPPPPPPPPPRAYE 1416
Score = 27.7 bits (60), Expect = 6.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Query: 164 PLPPPPPPPP 173
P PPPPPPPP
Sbjct: 1403 PPPPPPPPPP 1412
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 45.8 bits (107), Expect = 2e-05
Identities = 29/67 (43%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 136 QHRGQQPCPQE------AGLISPLSPL--NPLGPPTPLPPP-PPPPPGLPTYEQALAASG 186
Q + QQP P E + P +P P PP P PPP PPPPPGLP AA G
Sbjct: 140 QQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHG 199
Query: 187 VHDAPPP 193
PPP
Sbjct: 200 AGGGPPP 206
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 45.4 bits (106), Expect = 3e-05
Identities = 22/45 (48%), Positives = 24/45 (53%)
Query: 153 LSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPPYTS 197
L PL P P P PPPPPPPP LP A++ A PP TS
Sbjct: 2029 LYPLRPQTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITS 2073
Score = 27.7 bits (60), Expect = 6.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 161 PPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPP 194
P P PPP PPP P + + + S + P P
Sbjct: 2478 PSLPQPPPQAPPPQCPLPQSSPSPSQLSHLPLKP 2511
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 45.1 bits (105), Expect = 4e-05
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 145 QEAGLISPLSPLNPLGPPTPLPPPPPPPPGLP-----TYEQALAASGVHDAPPPPYTS 197
Q + P+ P P PP P PPPPPPPP LP T A + APP P TS
Sbjct: 544 QNGPVTPPMPPPPPPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPPLPGTS 601
Score = 34.3 bits (77), Expect = 0.074
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 13/44 (29%)
Query: 158 PLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPPYTSLRRP 201
P+ PP P PPPPPPPP P PPPP L P
Sbjct: 547 PVTPPMP-PPPPPPPPPPP------------PPPPPPPPPLPGP 577
Score = 33.1 bits (74), Expect = 0.16
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 164 PLPPPPPP-PPGLPTYEQALAASGVHDAPPPP 194
PLPPPPPP PP T E PPPP
Sbjct: 525 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPP 556
Score = 28.5 bits (62), Expect = 4.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 160 GPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPP 194
GP P PPP PP P Q + PPPP
Sbjct: 524 GPLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPP 558
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 44.7 bits (104), Expect = 5e-05
Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Query: 141 QPCPQEAGLISPL-SPLNPLGPPTPLPPPPPPPPGLP 176
+PC + I+PL SPL P PP P PPPPPPPP LP
Sbjct: 794 EPC---SVTINPLPSPLPPTPPPPPPPPPPPPPPPLP 827
>gi|4506115 protein C [Homo sapiens]
Length = 461
Score = 43.9 bits (102), Expect = 9e-05
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 49 RANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTERFWESYI 95
RAN + LE L +LEREC+EE C +EEA+E F++ T FW ++
Sbjct: 42 RANSF-LEELRHSSLERECIEEICDFEEAKEIFQNVDDTLAFWSKHV 87
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 43.9 bits (102), Expect = 9e-05
Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 141 QPCPQEAGLISPLSPLNPLGPPTP-----LPPPPPPPPGL-PTYEQALAASG-VHDAPPP 193
QP P G + P + PLG P P +PPPPPPPP L P + G + PPP
Sbjct: 686 QPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPP 745
Query: 194 PYT---SLRRPH 202
P T S+ PH
Sbjct: 746 PITPPVSIPPPH 757
Score = 30.8 bits (68), Expect = 0.82
Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 18/75 (24%)
Query: 139 GQQPCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPT-----------------YEQA 181
G P G + P P P+ PP +PPP PP +P Y A
Sbjct: 728 GFNPMHLPPGFLPP-GPPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSA 786
Query: 182 LAASGVHDAPPPPYT 196
+ + + P PP T
Sbjct: 787 VPPAAPTNLPTPPVT 801
Score = 30.0 bits (66), Expect = 1.4
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 11/69 (15%)
Query: 139 GQQPCPQEAGLISPLSPLNPLGPPTPLPP------PPPPPPGLPTYEQALAASGVHDAPP 192
G P + G+ P PL PP P+PP PPP P G A+ P
Sbjct: 833 GLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF-----AMPPPHGMKGPF 887
Query: 193 PPYTSLRRP 201
PP+ RP
Sbjct: 888 PPHGPFVRP 896
Score = 28.9 bits (63), Expect = 3.1
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 10/54 (18%)
Query: 151 SPLSPLNPLGPPTPLPPPP--------PPPPGLPTYEQALAASGVHDAPPPPYT 196
S P++P+ P P+P PP PPP +P ++ G PP +T
Sbjct: 650 SHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGA--LQPPAFT 701
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 43.9 bits (102), Expect = 9e-05
Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 141 QPCPQEAGLISPLSPLNPLGPPTP-----LPPPPPPPPGL-PTYEQALAASG-VHDAPPP 193
QP P G + P + PLG P P +PPPPPPPP L P + G + PPP
Sbjct: 671 QPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPP 730
Query: 194 PYT---SLRRPH 202
P T S+ PH
Sbjct: 731 PITPPVSIPPPH 742
Score = 30.4 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 139 GQQPCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLP 176
G P G + P P P+ PP +PPP PP +P
Sbjct: 713 GFNPMHLPPGFLPP-GPPPPITPPVSIPPPHTPPISIP 749
Score = 30.0 bits (66), Expect = 1.4
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 11/69 (15%)
Query: 139 GQQPCPQEAGLISPLSPLNPLGPPTPLPP------PPPPPPGLPTYEQALAASGVHDAPP 192
G P + G+ P PL PP P+PP PPP P G A+ P
Sbjct: 840 GLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF-----AMPPPHGMKGPF 894
Query: 193 PPYTSLRRP 201
PP+ RP
Sbjct: 895 PPHGPFVRP 903
Score = 28.9 bits (63), Expect = 3.1
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 10/54 (18%)
Query: 151 SPLSPLNPLGPPTPLPPPP--------PPPPGLPTYEQALAASGVHDAPPPPYT 196
S P++P+ P P+P PP PPP +P ++ G PP +T
Sbjct: 635 SHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGA--LQPPAFT 686
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 43.9 bits (102), Expect = 9e-05
Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 141 QPCPQEAGLISPLSPLNPLGPPTP-----LPPPPPPPPGL-PTYEQALAASG-VHDAPPP 193
QP P G + P + PLG P P +PPPPPPPP L P + G + PPP
Sbjct: 686 QPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPP 745
Query: 194 PYT---SLRRPH 202
P T S+ PH
Sbjct: 746 PITPPVSIPPPH 757
Score = 30.4 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 139 GQQPCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLP 176
G P G + P P P+ PP +PPP PP +P
Sbjct: 728 GFNPMHLPPGFLPP-GPPPPITPPVSIPPPHTPPISIP 764
Score = 30.0 bits (66), Expect = 1.4
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 11/69 (15%)
Query: 139 GQQPCPQEAGLISPLSPLNPLGPPTPLPP------PPPPPPGLPTYEQALAASGVHDAPP 192
G P + G+ P PL PP P+PP PPP P G A+ P
Sbjct: 855 GLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF-----AMPPPHGMKGPF 909
Query: 193 PPYTSLRRP 201
PP+ RP
Sbjct: 910 PPHGPFVRP 918
Score = 28.9 bits (63), Expect = 3.1
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 10/54 (18%)
Query: 151 SPLSPLNPLGPPTPLPPPP--------PPPPGLPTYEQALAASGVHDAPPPPYT 196
S P++P+ P P+P PP PPP +P ++ G PP +T
Sbjct: 650 SHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGA--LQPPAFT 701
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 43.5 bits (101), Expect = 1e-04
Identities = 27/61 (44%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTP-----LPPPPPPPPGL---PTYEQALAASGVHDAPPP 193
P P GL + P PL PP P LPPPPPP PGL P L G PPP
Sbjct: 459 PPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPPPP 518
Query: 194 P 194
P
Sbjct: 519 P 519
Score = 40.8 bits (94), Expect = 8e-04
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 11/44 (25%)
Query: 158 PLGPPTPL-------PPPPPPPPGLPTYEQALAASGVHDAPPPP 194
P PP PL PPPPPPPP LP ++ A + APPPP
Sbjct: 422 PPPPPPPLLPGSSAEPPPPPPPPPLP----SVGAKALPTAPPPP 461
Score = 33.5 bits (75), Expect = 0.13
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 7/29 (24%)
Query: 166 PPPPPPPPGLPTYEQALAASGVHDAPPPP 194
PPPPPPPP LP S PPPP
Sbjct: 421 PPPPPPPPLLP-------GSSAEPPPPPP 442
Score = 32.3 bits (72), Expect = 0.28
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 9/47 (19%)
Query: 152 PLSPLNPLGPPTPLPP---------PPPPPPGLPTYEQALAASGVHD 189
P PL LG P P PP PPPPPP LP A G+ +
Sbjct: 490 PPPPLPGLGCPPPPPPLLPGMGWGPPPPPPPLLPCTCSPPVAGGMEE 536
Score = 31.6 bits (70), Expect = 0.48
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 19/78 (24%)
Query: 136 QHRGQQPCPQEAGLISPLSPLNPLGPPTPLP------------PPPPPPPGL-------P 176
+ + P P + P S P PP P P PPPPP PGL P
Sbjct: 415 EQQASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAP 474
Query: 177 TYEQALAASGVHDAPPPP 194
L S PPPP
Sbjct: 475 PLPPPLPGSCEFLPPPPP 492
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 43.5 bits (101), Expect = 1e-04
Identities = 27/61 (44%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTP-----LPPPPPPPPGL---PTYEQALAASGVHDAPPP 193
P P GL + P PL PP P LPPPPPP PGL P L G PPP
Sbjct: 459 PPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPPPP 518
Query: 194 P 194
P
Sbjct: 519 P 519
Score = 40.8 bits (94), Expect = 8e-04
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 11/44 (25%)
Query: 158 PLGPPTPL-------PPPPPPPPGLPTYEQALAASGVHDAPPPP 194
P PP PL PPPPPPPP LP ++ A + APPPP
Sbjct: 422 PPPPPPPLLPGSSAEPPPPPPPPPLP----SVGAKALPTAPPPP 461
Score = 33.5 bits (75), Expect = 0.13
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 7/29 (24%)
Query: 166 PPPPPPPPGLPTYEQALAASGVHDAPPPP 194
PPPPPPPP LP S PPPP
Sbjct: 421 PPPPPPPPLLP-------GSSAEPPPPPP 442
Score = 32.3 bits (72), Expect = 0.28
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 9/47 (19%)
Query: 152 PLSPLNPLGPPTPLPP---------PPPPPPGLPTYEQALAASGVHD 189
P PL LG P P PP PPPPPP LP A G+ +
Sbjct: 490 PPPPLPGLGCPPPPPPLLPGMGWGPPPPPPPLLPCTCSPPVAGGMEE 536
Score = 31.6 bits (70), Expect = 0.48
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 19/78 (24%)
Query: 136 QHRGQQPCPQEAGLISPLSPLNPLGPPTPLP------------PPPPPPPGL-------P 176
+ + P P + P S P PP P P PPPPP PGL P
Sbjct: 415 EQQASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAP 474
Query: 177 TYEQALAASGVHDAPPPP 194
L S PPPP
Sbjct: 475 PLPPPLPGSCEFLPPPPP 492
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 43.1 bits (100), Expect = 2e-04
Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPP 193
P P G PL P P P+PPPPPPPP P +SG APPP
Sbjct: 370 PPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPP-------SSGNGPAPPP 414
Score = 35.0 bits (79), Expect = 0.043
Identities = 23/57 (40%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 144 PQEAGLISPLSPLNPLGPPTP--LPPPPPPPPGL----PTYEQALAASGVHDAPPPP 194
P G+ P P P GPP P PPPPPPP P A G PPPP
Sbjct: 344 PVPLGIAPP--PPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPP 398
Score = 32.0 bits (71), Expect = 0.37
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 148 GLISPLSPLNPLG--PPTPLP-PPPPPPPGLPTYEQALAASGVHDAPPPP 194
G PL P+ PLG PP P P PPPP G P A PPPP
Sbjct: 337 GRSGPLPPV-PLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPP 385
Score = 27.7 bits (60), Expect = 6.9
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Query: 139 GQQPCPQEAGLISPLSPLNPLGPPTPL----PPPPPPPPGL 175
G P P P+ P P PP P P PPP PP L
Sbjct: 379 GPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPAL 419
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 43.1 bits (100), Expect = 2e-04
Identities = 21/42 (50%), Positives = 22/42 (52%)
Query: 144 PQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAAS 185
P A SP P P PP P PPPPPPPP LP+ A S
Sbjct: 618 PYTASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGS 659
Score = 42.4 bits (98), Expect = 3e-04
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 152 PLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASG 186
P PL P PP P PPPPPPPP P Q+ ++G
Sbjct: 624 PSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAG 658
Score = 40.0 bits (92), Expect = 0.001
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 18/63 (28%)
Query: 142 PCPQEAGLISPLS---PLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPPYTSL 198
P + +++P + P PL PP P PPPPPPPP PPPP S
Sbjct: 608 PLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPP---------------PPPPPPLPSQ 652
Query: 199 RRP 201
P
Sbjct: 653 SAP 655
Score = 38.5 bits (88), Expect = 0.004
Identities = 19/38 (50%), Positives = 19/38 (50%)
Query: 154 SPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAP 191
SP P PP P PPPPPPPP P A S AP
Sbjct: 625 SPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAP 662
Score = 35.4 bits (80), Expect = 0.033
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 16/62 (25%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPPPPPP----------GLPTYEQALAASGVHDAP 191
P P E+ L+ P P P+P+P PPPPPP G P + + +S P
Sbjct: 918 PPPPESSLVFPPPP------PSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKP 971
Query: 192 PP 193
PP
Sbjct: 972 PP 973
Score = 35.0 bits (79), Expect = 0.043
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 9/45 (20%)
Query: 159 LGPPTPLPPPPPPPPGLPTYEQALA---------ASGVHDAPPPP 194
L PP + PPPPPPP PT A+A + APPPP
Sbjct: 702 LVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPP 746
Score = 32.0 bits (71), Expect = 0.37
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 12/52 (23%)
Query: 150 ISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPPYTSLRRP 201
I + + + PPTP PPPP P P P APP P ++ P
Sbjct: 749 IHQVQHITQVAPPTPPPPPPIPAPLPP------------QAPPKPLVTIPAP 788
Score = 31.6 bits (70), Expect = 0.48
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPP 194
P P ++P+ + PPTP PP PP + A AS + +PP P
Sbjct: 786 PAPTSTKTVAPV--VTQAAPPTPTPPVPPAKK-----QPAFPASYIPPSPPTP 831
Score = 31.6 bits (70), Expect = 0.48
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 152 PLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPP 193
P P + + P P PP P PPP LP + A PPP
Sbjct: 817 PAFPASYIPPSPPTPPVPVPPPTLPKQQSFCA------KPPP 852
Score = 30.4 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Query: 144 PQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPP 194
PQ + P P P P PPPPP S V PPPP
Sbjct: 892 PQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPP 942
Score = 30.0 bits (66), Expect = 1.4
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 13/64 (20%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTPLPPP-----------PPPPPGLPTYEQALAASGVHDA 190
P ++ + P +P PP P+PPP PPP P P ++
Sbjct: 812 PAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPV--PSVVKQIASQF 869
Query: 191 PPPP 194
PPPP
Sbjct: 870 PPPP 873
Score = 28.1 bits (61), Expect = 5.3
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 10/63 (15%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPPPPPP----------GLPTYEQALAASGVHDAP 191
P P + + ++ + P PP P P P P PP PT + +A AP
Sbjct: 744 PPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAP 803
Query: 192 PPP 194
P P
Sbjct: 804 PTP 806
Score = 27.7 bits (60), Expect = 6.9
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 152 PLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPP 194
P + P P + +PP PP PP +P L A PPP
Sbjct: 811 PPAKKQPAFPASYIPPSPPTPP-VPVPPPTLPKQQSFCAKPPP 852
Score = 27.3 bits (59), Expect = 9.0
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 11/61 (18%)
Query: 141 QPCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPPYTSLRR 200
+P Q + + P P P + L PPPPP +P PPPP T+
Sbjct: 901 KPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPA-----------PPPPPPPTASPT 949
Query: 201 P 201
P
Sbjct: 950 P 950
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 43.1 bits (100), Expect = 2e-04
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 144 PQEAGLISP--LSPLNPLGPPT---PLPPPPPPPPGLPTYEQALAASGVHDAPPPPYTSL 198
P A + +P L+P PL PP PLPPPPPPPP P + PPP + ++
Sbjct: 664 PGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAV 723
Query: 199 RRP 201
P
Sbjct: 724 TVP 726
Score = 36.6 bits (83), Expect = 0.015
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTP---LPPP-PPPPPGLPTYEQALAASGVHDAPPPP 194
P P G PL P P PP P +PPP PPPPP P A+ PPPP
Sbjct: 680 PLPPPPGF-PPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAVT------VPPPP 729
Score = 35.4 bits (80), Expect = 0.033
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Query: 145 QEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPT 177
+ AG+ +P PL PP P PPPPPPPP PT
Sbjct: 1532 RNAGIPAPPPPL----PPQP-PPPPPPPPVEPT 1559
Score = 34.3 bits (77), Expect = 0.074
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 150 ISPLSPLN-PLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPPYTSLRRPH 202
+ P P+ PL PLPPP PP P P E + PP P PH
Sbjct: 1266 VEPEPPMMLPLPLQPPLPPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPH 1319
Score = 34.3 bits (77), Expect = 0.074
Identities = 13/19 (68%), Positives = 13/19 (68%)
Query: 161 PPTPLPPPPPPPPGLPTYE 179
PP PLPP PPPPP P E
Sbjct: 1539 PPPPLPPQPPPPPPPPPVE 1557
Score = 32.3 bits (72), Expect = 0.28
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 17/50 (34%)
Query: 152 PLSPLNPLGPPTPLPPPPP-------PPPGLPTYEQALAASGVHDAPPPP 194
P P+ P PP P PPPPP PPP LP A GV PPPP
Sbjct: 701 PGFPMPPPLPPPP-PPPPPAHPAVTVPPPPLP------APPGV---PPPP 740
Score = 32.0 bits (71), Expect = 0.37
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 9/43 (20%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTP-------LPPPP-PPPPGLP 176
P P + G P PL P PP P +PPPP P PPG+P
Sbjct: 696 PPPPQPGFPMP-PPLPPPPPPPPPAHPAVTVPPPPLPAPPGVP 737
Score = 30.4 bits (67), Expect = 1.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 152 PLSPLNPLGPPTPLPPPPPPPPGLPTYE 179
PL P PL P PP PPPP + E
Sbjct: 436 PLPPAEPLAKEKPGTPPGPPPPDTNSME 463
Score = 30.0 bits (66), Expect = 1.4
Identities = 13/18 (72%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Query: 161 PPTPLPPPP--PPPPGLP 176
PP PLP PP PPPP LP
Sbjct: 726 PPPPLPAPPGVPPPPILP 743
Score = 29.3 bits (64), Expect = 2.4
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 142 PCPQEAGLISPLSPLN-PLGPPTP--LPPPPPPPPGL 175
P P + P PL P G P P LPP PP PPGL
Sbjct: 716 PPPAHPAVTVPPPPLPAPPGVPPPPILPPLPPFPPGL 752
Score = 28.5 bits (62), Expect = 4.1
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 24/55 (43%)
Query: 152 PLSPLNPLGPPTPLPPPPPPP------------------------PGLPTYEQAL 182
P P P+ PP P PPPPPPP P LP + L
Sbjct: 698 PPQPGFPMPPPLPPPPPPPPPAHPAVTVPPPPLPAPPGVPPPPILPPLPPFPPGL 752
Score = 27.7 bits (60), Expect = 6.9
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 166 PPPPPPPPGLPTYEQALAASGVHDAPPPPYTS 197
P PPP PP P ++ G PPPP T+
Sbjct: 432 PAPPPLPPAEPLAKEK---PGTPPGPPPPDTN 460
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 42.4 bits (98), Expect = 3e-04
Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 18/84 (21%)
Query: 136 QHRGQQPCPQEAG---LISPLSP-LNPLGPPT--------PLP------PPPPPPPGLPT 177
Q R + P PQ G + SPL P L P G P PLP PP PP P +PT
Sbjct: 76 QPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPSPPSPPVPT 135
Query: 178 YEQALAASGVHDAPPPPYTSLRRP 201
+ +L A P P SLR P
Sbjct: 136 AQSSLPAPWPPQGPRSPAPSLRAP 159
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 42.4 bits (98), Expect = 3e-04
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 137 HRGQQPCPQEAGLISPLSPLNPLGPPTPL----PPPPPPPPGLPTYEQALAASGVHDAPP 192
H+ Q P P P P PP P PPPPPPPP +P +QA A + P
Sbjct: 743 HQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMP--QQAAPAM---KSSP 797
Query: 193 PPYTSLRRP 201
PP+ + + P
Sbjct: 798 PPFIATQVP 806
Score = 38.5 bits (88), Expect = 0.004
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 137 HRGQQPCPQEAGLISPLSPLNPLGPPTP-------LPPPPPPPPGLPTYEQALAASGVHD 189
H Q Q + P P PP P PPPPPPPP +P AA +
Sbjct: 740 HHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQ----AAPAMKS 795
Query: 190 APPP 193
+PPP
Sbjct: 796 SPPP 799
Score = 37.7 bits (86), Expect = 0.007
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Query: 153 LSPLNPLGPPTPL---------PPPPPPPPGLPTYEQALAASGVHDAPPPPYTSLRRPH 202
L L + PPTPL PPPP PPP P+ +Q L PP P ++ H
Sbjct: 932 LQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQH 990
Score = 33.1 bits (74), Expect = 0.16
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 158 PLGPPTPLPPPPPP----PPGLPTYEQALAASGVHDAPPPPYTSLRRPH 202
P PP P P PPP PP P + Q + S H PPP + PH
Sbjct: 974 PPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFS-THIQQPPPPQGQQPPH 1021
Score = 30.4 bits (67), Expect = 1.1
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 155 PLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPP 194
P PL P P+PP P PPP P + + + A P P
Sbjct: 243 PPQPLQTPPPVPPQPQPPPA-PAPQPVQSHPPIIAATPQP 281
Score = 29.3 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 154 SPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPP 192
+P+ + PP PL PPP PP P A A V PP
Sbjct: 236 TPVMTVVPPQPLQTPPPVPP-QPQPPPAPAPQPVQSHPP 273
Score = 28.5 bits (62), Expect = 4.1
Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 8/60 (13%)
Query: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPP--------PPPPGLPTYEQALAASGVHDAPPP 193
P P +SP PL P P+ PP PP P L + + L + PP
Sbjct: 882 PKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPP 941
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.139 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,799,457
Number of Sequences: 37866
Number of extensions: 915855
Number of successful extensions: 26593
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 543
Number of HSP's that attempted gapping in prelim test: 9569
Number of HSP's gapped (non-prelim): 9293
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.