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Search of human proteins with 4505343
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505343 nuclear cap binding protein subunit 1, 80kDa [Homo
sapiens]
(790 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505343 nuclear cap binding protein subunit 1, 80kDa [Homo sa... 1615 0.0
gi|31377634 guanylate binding protein 4 [Homo sapiens] 43 0.001
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 37 0.093
gi|34878777 ring finger protein 20 [Homo sapiens] 36 0.12
gi|24308229 protein kinase C and casein kinase substrate in neur... 36 0.12
gi|239753269 PREDICTED: upstream binding transcription factor, R... 36 0.16
gi|239747816 PREDICTED: upstream binding transcription factor, R... 36 0.16
gi|239741686 PREDICTED: upstream binding transcription factor, R... 36 0.16
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 36 0.16
gi|115527097 CDC42-binding protein kinase beta [Homo sapiens] 36 0.16
gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens] 35 0.27
gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens] 35 0.27
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 35 0.27
gi|46249349 homer 2 isoform 1 [Homo sapiens] 35 0.27
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 35 0.27
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 35 0.27
gi|239047795 pleckstrin homology domain containing, family A mem... 35 0.35
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 35 0.35
gi|10880975 hypothetical protein LOC57821 [Homo sapiens] 35 0.35
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 34 0.46
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens] 34 0.46
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens] 34 0.46
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens] 34 0.46
gi|33356128 NMDA receptor regulated 1-like protein isoform 1 [Ho... 34 0.46
gi|239745299 PREDICTED: hypothetical protein [Homo sapiens] 34 0.60
gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo sap... 34 0.60
gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-l... 34 0.60
gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-l... 34 0.60
gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-l... 34 0.60
gi|169208016 PREDICTED: similar to golgi autoantigen, golgin sub... 34 0.60
>gi|4505343 nuclear cap binding protein subunit 1, 80kDa [Homo
sapiens]
Length = 790
Score = 1615 bits (4181), Expect = 0.0
Identities = 790/790 (100%), Positives = 790/790 (100%)
Query: 1 MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD 60
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
Sbjct: 1 MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD 60
Query: 61 LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN 120
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
Sbjct: 61 LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN 120
Query: 121 YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV 180
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
Sbjct: 121 YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV 180
Query: 181 GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK 240
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
Sbjct: 181 GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK 240
Query: 241 KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG 300
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
Sbjct: 241 KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG 300
Query: 301 PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF 360
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
Sbjct: 301 PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF 360
Query: 361 QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH 420
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
Sbjct: 361 QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH 420
Query: 421 LSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN 480
LSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
Sbjct: 421 LSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN 480
Query: 481 PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN 540
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
Sbjct: 481 PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN 540
Query: 541 PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM 600
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
Sbjct: 541 PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM 600
Query: 601 IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE 660
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
Sbjct: 601 IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE 660
Query: 661 EAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI 720
EAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
Sbjct: 661 EAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI 720
Query: 721 LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA 780
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
Sbjct: 721 LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA 780
Query: 781 VFQQFCALQA 790
VFQQFCALQA
Sbjct: 781 VFQQFCALQA 790
>gi|31377634 guanylate binding protein 4 [Homo sapiens]
Length = 640
Score = 42.7 bits (99), Expect = 0.001
Identities = 25/93 (26%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 639 EILHSTIRKMNKHVLKIQKELEEAKEKLARQHKR--------RSDDDDRSSDRKDGVLEE 690
+++ + R +++ +++K+LEE +E L R+H+R + + +K L +
Sbjct: 529 QMMEAQERSFQEYMAQMEKKLEEERENLLREHERLLKHKLKVQEEMLKEEFQKKSEQLNK 588
Query: 691 QIERLQEKVESAQSEQKNLFLVI-FQRFIMILT 722
+I +L+EK+ES ++EQ L ++ IMI+T
Sbjct: 589 EINQLKEKIESTKNEQLRLLKILDMASNIMIVT 621
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 36.6 bits (83), Expect = 0.093
Identities = 32/160 (20%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 549 QTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKM 608
Q +H ++ L + EV + A+ + L + E+ N ++ A + ++M
Sbjct: 568 QKKIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQVEL--NSEKVYAEMKEQM 625
Query: 609 IRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLAR 668
+ + A+ S L ++ F+W+ L ++ + +++++ E E+ K L +
Sbjct: 626 EKVE-------ADLTRSKSLREKQSKEFLWQ-LEDIRQRYEQQIVELKLEHEQEKTHLLQ 677
Query: 669 QHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKN 708
QH D R +R +IE L++++ +A E +N
Sbjct: 678 QHNAEKDSLVRDHER-------EIENLEKQLRAANMEHEN 710
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 36.2 bits (82), Expect = 0.12
Identities = 19/64 (29%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 646 RKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSE 705
+K + +++ L++ ++K +++K+ +D+D + RK +EEQIE LQ+K+ A+ E
Sbjct: 668 KKSKAELEDLRQRLKDLEDKEKKENKKMADED---ALRKIRAVEEQIEYLQKKLAMAKQE 724
Query: 706 QKNL 709
++ L
Sbjct: 725 EEAL 728
Score = 31.6 bits (70), Expect = 3.0
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 656 QKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQ---IERLQEKVESAQSEQKNLFLV 712
+KE E K+KL K R D+ + D +++ I++L+ +++ AQ QK + L+
Sbjct: 587 EKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLL 646
Query: 713 I 713
+
Sbjct: 647 L 647
>gi|24308229 protein kinase C and casein kinase substrate in neurons
1 [Homo sapiens]
Length = 444
Score = 36.2 bits (82), Expect = 0.12
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 646 RKMNKHVLKIQKELEEAKEK--LARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQ 703
RK K K KELE AK+ LA + ++ + + +S + V EQ ++LQ+KV+ +
Sbjct: 140 RKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTEQSVTPEQQKKLQDKVDKCK 199
Query: 704 SEQKNLFLVIFQRFIMILTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMV 763
+ + T+ + TP Y +E ++Q+F Q Q ++ +V
Sbjct: 200 QDVQK-------------TQEKYEKVLEDVGKTTPQY---MENMEQVFEQCQQFEEKRLV 243
Query: 764 TLENLL 769
L+ +L
Sbjct: 244 FLKEVL 249
>gi|239753269 PREDICTED: upstream binding transcription factor, RNA
polymerase I-like 6 [Homo sapiens]
Length = 400
Score = 35.8 bits (81), Expect = 0.16
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 595 RNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKM-----N 649
RNHP L+ IR NW S++ V +IL +++
Sbjct: 101 RNHPDFPKRLLTAYIRF------FKENWPQYSQMYPGMRSQEVTKILSKKYKELPEQMKQ 154
Query: 650 KHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNL 709
KH+ +KE +E +EKLAR + D D + +K + + ++Q+KV+ E ++L
Sbjct: 155 KHIQDFRKEKQEFEEKLARFREEHPDLDQKG--KKSDICKRVQTKVQKKVQKNIEEVRSL 212
>gi|239747816 PREDICTED: upstream binding transcription factor, RNA
polymerase I-like 6 [Homo sapiens]
Length = 400
Score = 35.8 bits (81), Expect = 0.16
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 595 RNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKM-----N 649
RNHP L+ IR NW S++ V +IL +++
Sbjct: 101 RNHPDFPKRLLTAYIRF------FKENWPQYSQMYPGMRSQEVTKILSKKYKELPEQMKQ 154
Query: 650 KHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNL 709
KH+ +KE +E +EKLAR + D D + +K + + ++Q+KV+ E ++L
Sbjct: 155 KHIQDFRKEKQEFEEKLARFREEHPDLDQKG--KKSDICKRVQTKVQKKVQKNIEEVRSL 212
>gi|239741686 PREDICTED: upstream binding transcription factor, RNA
polymerase I-like 6 [Homo sapiens]
Length = 400
Score = 35.8 bits (81), Expect = 0.16
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 595 RNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKM-----N 649
RNHP L+ IR NW S++ V +IL +++
Sbjct: 101 RNHPDFPKRLLTAYIRF------FKENWPQYSQMYPGMRSQEVTKILSKKYKELPEQMKQ 154
Query: 650 KHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNL 709
KH+ +KE +E +EKLAR + D D + +K + + ++Q+KV+ E ++L
Sbjct: 155 KHIQDFRKEKQEFEEKLARFREEHPDLDQKG--KKSDICKRVQTKVQKKVQKNIEEVRSL 212
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 35.8 bits (81), Expect = 0.16
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 646 RKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSE 705
RK + + I+K+L E+ Q+K+ ++ + K E ++ L+EK++S +S
Sbjct: 1642 RKAEQKIAAIKKQLLSQMEEKEEQYKKGTESHLSELNTKLQEREREVHILEEKLKSVESS 1701
Query: 706 QKNLFLVIFQRFIMILTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQ 760
Q +V R + + + E D + Y+ I LQ+ + +++Q+
Sbjct: 1702 QSETLIV--PRSAKNVAAYTEQEEADSQGCVQKTYEEKISVLQRNLTEKEKLLQR 1754
>gi|115527097 CDC42-binding protein kinase beta [Homo sapiens]
Length = 1711
Score = 35.8 bits (81), Expect = 0.16
Identities = 18/83 (21%), Positives = 41/83 (49%)
Query: 627 ELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDG 686
++ RD E IR++ + L++ ++L+E+ + + H + + D++
Sbjct: 429 DVQRDLEHSLQMEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSSRALSNSNRDKEIK 488
Query: 687 VLEEQIERLQEKVESAQSEQKNL 709
L E+IERL+ K+ + ++ L
Sbjct: 489 KLNEEIERLKNKIADSNRLERQL 511
>gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]
Length = 284
Score = 35.0 bits (79), Expect = 0.27
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 639 EILHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDD--DDRSSDRKDGVLEEQIERLQ 696
+ L ++ V K + ++EA+EKL + K+ +D D S +R+ ++EE+++R Q
Sbjct: 44 QALQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQ 103
Query: 697 EKVESA 702
E++ +A
Sbjct: 104 ERLATA 109
Score = 31.6 bits (70), Expect = 3.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 657 KELEEAKEKLARQHKRRSDDDDRSSD---RKDGVLEEQIERLQEKVESAQSEQKNL 709
+E E +E ++ K ++D DR + RK +LE ++ER +E+ E A+S + L
Sbjct: 138 EEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSEERAEVAESRARQL 193
Score = 30.0 bits (66), Expect = 8.7
Identities = 14/65 (21%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDG--VLEEQIERLQEKVESA 702
+ +N+ + +++EL+ A+E+LA ++ + + + + + G V+E + + +EK+E
Sbjct: 85 VASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQ 144
Query: 703 QSEQK 707
+ + K
Sbjct: 145 EMQLK 149
>gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens]
Length = 284
Score = 35.0 bits (79), Expect = 0.27
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 639 EILHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDD--DDRSSDRKDGVLEEQIERLQ 696
+ L ++ V K + ++EA+EKL + K+ +D D S +R+ ++EE+++R Q
Sbjct: 44 QALQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQ 103
Query: 697 EKVESA 702
E++ +A
Sbjct: 104 ERLATA 109
Score = 31.2 bits (69), Expect = 3.9
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 657 KELEEAKEKLARQHKRRSDDDDRSSD---RKDGVLEEQIERLQEKVESAQSEQKNLFLVI 713
+E E +E ++ K ++D DR + RK +LE ++ER +E+ E A+S+ +L
Sbjct: 138 EEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSEERAEVAESKCGDL---- 193
Query: 714 FQRFIMILTEHL--VRCETDGTSVLTPWYKNCIERLQQ 749
+ + I+T +L + + D S Y+ I+ L++
Sbjct: 194 -EEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEE 230
Score = 30.0 bits (66), Expect = 8.7
Identities = 14/65 (21%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDG--VLEEQIERLQEKVESA 702
+ +N+ + +++EL+ A+E+LA ++ + + + + + G V+E + + +EK+E
Sbjct: 85 VASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQ 144
Query: 703 QSEQK 707
+ + K
Sbjct: 145 EMQLK 149
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 35.0 bits (79), Expect = 0.27
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQS 704
I K+ + K+Q+EL++ + L + R +++ DR G ++E+ LQE++E +
Sbjct: 817 IEKLKERSSKLQEELDKYSQALRKNEILRQTIEEK--DRSLGSMKEENNHLQEELERLRE 874
Query: 705 EQKNLFLVIFQRFIMILTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVT 764
EQ V + + +TE + E + + + I+ Q+I +Q Q + +
Sbjct: 875 EQSRTAPVADPKTLDSVTE--LASEVSQLNTIKEHLEEEIKHHQKIIEDQNQSKMQLLQS 932
Query: 765 LE 766
L+
Sbjct: 933 LQ 934
>gi|46249349 homer 2 isoform 1 [Homo sapiens]
Length = 343
Score = 35.0 bits (79), Expect = 0.27
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 566 LAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWIFS 625
L KF E F+ + E+ + + E NH Q +V + A AN
Sbjct: 96 LTKFAEKFQEVKEAAKIAKDKTQEKIETSSNHSQASSV---NGTDDEKASHAGPANTHLK 152
Query: 626 SE-------LSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDD 678
SE L++ + WEI T+R+ N + +E + E+ RQ D++D
Sbjct: 153 SENDKLKIALTQSAANVKKWEIELQTLRESNARLTTALQESAASVEQWKRQFSICRDEND 212
Query: 679 RSSDRKDGVLEEQIERLQEKVESAQSEQK 707
R ++ D + E+ E +EK ++ Q +++
Sbjct: 213 RLRNKIDELEEQCSEINREKEKNTQLKRR 241
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 35.0 bits (79), Expect = 0.27
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 656 QKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNL 709
+++L+E ++K+ + ++ +D+ R+S + EE+ E +ES +EQK L
Sbjct: 640 EEKLKEQEQKMKEKQEKLKEDEQRNSTADISIGEEEREDFDTSIESKDTEQKEL 693
Score = 31.2 bits (69), Expect = 3.9
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 641 LHSTIRKMNKHVLKIQKELEEAKEKLARQH-KRRSDDDDRSSDRKDGVLEEQIERLQEKV 699
L ST + +V +++ +E +E A QH K R + R RK+ L+EQ ++++EK
Sbjct: 595 LVSTRDFIEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQ 654
Query: 700 ES-AQSEQKN 708
E + EQ+N
Sbjct: 655 EKLKEDEQRN 664
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 35.0 bits (79), Expect = 0.27
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 656 QKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNL 709
+++L+E ++K+ + ++ +D+ R+S + EE+ E +ES +EQK L
Sbjct: 672 EEKLKEQEQKMKEKQEKLKEDEQRNSTADISIGEEEREDFDTSIESKDTEQKEL 725
Score = 31.2 bits (69), Expect = 3.9
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 641 LHSTIRKMNKHVLKIQKELEEAKEKLARQH-KRRSDDDDRSSDRKDGVLEEQIERLQEKV 699
L ST + +V +++ +E +E A QH K R + R RK+ L+EQ ++++EK
Sbjct: 627 LVSTRDFIEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQ 686
Query: 700 ES-AQSEQKN 708
E + EQ+N
Sbjct: 687 EKLKEDEQRN 696
>gi|239047795 pleckstrin homology domain containing, family A member
7 [Homo sapiens]
Length = 1121
Score = 34.7 bits (78), Expect = 0.35
Identities = 44/231 (19%), Positives = 88/231 (38%), Gaps = 31/231 (13%)
Query: 489 DESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVFV 548
D S G+ A + K+ +D + KD+ + + LK
Sbjct: 628 DRRSMPSMGYMTHTVSAPSLHGKSADDTYLQLKKDLEYLDLKMTGRDLLKDRSLKPVKIA 687
Query: 549 QTLLHLAAKSFSHSFSALAKFHEVFKTLAESD---EGKLHVLRVMFEVWRNHPQMIAVLV 605
++ + F L + + L E+ E L VL E +R+ PQ + +
Sbjct: 688 ESDTDVKLSIFCEQDRVLQDLEDKIRALKENKDQLESVLEVLHRQMEQYRDQPQHLEKIA 747
Query: 606 --DKMIRTQIVDCAAVANWIFSSELSRDFTRLF-VWEILHSTIRKMNKHVLKIQKELEEA 662
K+++ +V A ELSR+ T + W LK++ ++E+
Sbjct: 748 YQQKLLQEDLVHIRA--------ELSRESTEMENAWN-----------EYLKLENDVEQL 788
Query: 663 KEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNLFLVI 713
K+ L QH+R ++S +KD + R+++ + ++N +++
Sbjct: 789 KQTLQEQHRRAFFFQEKSQIQKD------LWRIEDVTAGLSANKENFRILV 833
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 34.7 bits (78), Expect = 0.35
Identities = 16/57 (28%), Positives = 37/57 (64%)
Query: 653 LKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNL 709
LK++KEL+ KE + Q K++ +D +R ++ + ++ + +QEK+++ + E+ +L
Sbjct: 2099 LKLKKELQSNKESVKSQMKQKDEDLERRLEQAEEKHLKEKKNMQEKLDALRREKVHL 2155
>gi|10880975 hypothetical protein LOC57821 [Homo sapiens]
Length = 508
Score = 34.7 bits (78), Expect = 0.35
Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 654 KIQKELEEAKEKLARQHKRRSDDDDRSSDRK-DGVLEEQIERLQEKV 699
++QK+LEE +EKL R+ +RR ++++ R+ D V + +++ +E+V
Sbjct: 341 ELQKQLEEKREKLKREEERRKIEEEKEKKRENDIVFKAWLQKKREQV 387
>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
sapiens]
Length = 1150
Score = 34.3 bits (77), Expect = 0.46
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 653 LKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQK 707
LK++++ EE KE + + DDD +S D K EE+ + QE++E + E++
Sbjct: 670 LKVEEQKEEQKELEKSEKEEDEDDDRKSEDDK----EEEERKRQEEIERQRRERR 720
>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 34.3 bits (77), Expect = 0.46
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 641 LHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVE 700
LH +IR + V +++K+L + KL + DD S+D K+ L +I++L E +
Sbjct: 293 LHESIRYWEQEVSELKKDLAILEAKLCFFTDNKEKLDDISNDEKNEFL-NKIKQLVETLH 351
Query: 701 SAQSEQKNL 709
+A+ E K+L
Sbjct: 352 AARMEYKDL 360
>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 34.3 bits (77), Expect = 0.46
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 641 LHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVE 700
LH +IR + V +++K+L + KL + DD S+D K+ L +I++L E +
Sbjct: 293 LHESIRYWEQEVSELKKDLAILEAKLCFFTDNKEKLDDISNDEKNEFL-NKIKQLVETLH 351
Query: 701 SAQSEQKNL 709
+A+ E K+L
Sbjct: 352 AARMEYKDL 360
>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 34.3 bits (77), Expect = 0.46
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 641 LHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVE 700
LH +IR + V +++K+L + KL + DD S+D K+ L +I++L E +
Sbjct: 293 LHESIRYWEQEVSELKKDLAILEAKLCFFTDNKEKLDDISNDEKNEFL-NKIKQLVETLH 351
Query: 701 SAQSEQKNL 709
+A+ E K+L
Sbjct: 352 AARMEYKDL 360
>gi|33356128 NMDA receptor regulated 1-like protein isoform 1 [Homo
sapiens]
Length = 864
Score = 34.3 bits (77), Expect = 0.46
Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 15/133 (11%)
Query: 639 EILHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEK 698
++L R K L+ +++ E + + Q K+R ++++ +S K+ ++ E++ER++
Sbjct: 594 KMLSKQRRAQKKAKLEEERKHAERERQQKNQKKKRDEEEEEASGLKEELIPEKLERVENP 653
Query: 699 VESAQS---EQKNL-----------FLVIFQRFIMILTEHLVRCETDGTSVLTPWYKNCI 744
+E A KNL F + F++ +L V+ + PW C+
Sbjct: 654 LEEAVKFLIPLKNLVADNIDTHLLAFEIYFRKGKFLLMLQSVK-RAFAINSNNPWLHECL 712
Query: 745 ERLQQIFLQHHQI 757
R + H +
Sbjct: 713 IRFSKSVSNHSNL 725
>gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]
Length = 523
Score = 33.9 bits (76), Expect = 0.60
Identities = 17/65 (26%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQS 704
+R+ + + + ++ L E +E+L Q +R + ++R ++++ L EQ ERL E+ E +
Sbjct: 236 LREQEERLCEQEERLREHEERLCEQEERLCEQEERLREQEER-LHEQEERLCEQEERLRE 294
Query: 705 EQKNL 709
+++ L
Sbjct: 295 QEERL 299
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLE------EQIERLQEK 698
+R+ + + + ++ L E +E+L Q +R + ++R + ++ + E EQ ERL+E+
Sbjct: 215 LREQEERLCEQEERLREQEERLREQEERLCEQEERLREHEERLCEQEERLCEQEERLREQ 274
Query: 699 VESAQSEQKNL 709
E +++ L
Sbjct: 275 EERLHEQEERL 285
Score = 32.3 bits (72), Expect = 1.8
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 646 RKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSE 705
R+ + + + ++ L E +E+L Q +R + ++R ++++ L EQ ERL E+ E +
Sbjct: 195 RRQEERLREQEERLREQEERLREQEERLCEQEERLREQEER-LREQEERLCEQEERLREH 253
Query: 706 QKNL 709
++ L
Sbjct: 254 EERL 257
Score = 32.3 bits (72), Expect = 1.8
Identities = 15/65 (23%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQS 704
+R+ + + + ++ L E +E+L Q +R + ++R ++++ + E++ ERL+E E
Sbjct: 201 LREQEERLREQEERLREQEERLCEQEERLREQEERLREQEERLCEQE-ERLREHEERLCE 259
Query: 705 EQKNL 709
+++ L
Sbjct: 260 QEERL 264
Score = 31.6 bits (70), Expect = 3.0
Identities = 17/65 (26%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQS 704
+R+ + + + ++ L E +E+L Q +R + ++R ++++ L EQ ERL E+ E +
Sbjct: 250 LREHEERLCEQEERLCEQEERLREQEERLHEQEERLCEQEER-LREQEERLCEQEERLRE 308
Query: 705 EQKNL 709
+++ L
Sbjct: 309 QEERL 313
Score = 31.6 bits (70), Expect = 3.0
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 656 QKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNL 709
++ L E +E+L Q +R + ++R ++++ L EQ ERL E+ E + +++ L
Sbjct: 275 EERLHEQEERLCEQEERLREQEERLCEQEER-LREQEERLCEQEERLREQEERL 327
Score = 30.8 bits (68), Expect = 5.1
Identities = 15/63 (23%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQS 704
+R+ + + + ++ L E +E+L Q +R + ++R ++++ + E++ ERL+E+ E
Sbjct: 271 LREQEERLHEQEERLCEQEERLREQEERLCEQEERLREQEERLCEQE-ERLREQEERLCE 329
Query: 705 EQK 707
++K
Sbjct: 330 QEK 332
Score = 30.4 bits (67), Expect = 6.7
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRK----DGVLEEQIERLQEKVE 700
+R+ + + + ++ L E +E+L Q +R + ++R +++ L E++E+L E+ E
Sbjct: 292 LREQEERLCEQEERLREQEERLCEQEERLREQEERLCEQEKLPGQERLLEEVEKLLEQ-E 350
Query: 701 SAQSEQKNL 709
Q EQ+ L
Sbjct: 351 RRQEEQERL 359
Score = 30.0 bits (66), Expect = 8.7
Identities = 14/54 (25%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 656 QKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNL 709
++ L E +E+L Q +R + ++R ++++ + E++ ERL+E+ E +++ L
Sbjct: 268 EERLREQEERLHEQEERLCEQEERLREQEERLCEQE-ERLREQEERLCEQEERL 320
>gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 479
Score = 33.9 bits (76), Expect = 0.60
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 646 RKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSE 705
R+ + + + ++ L E +E+L Q +R + ++R ++++ L EQ ERL+E+ E +
Sbjct: 195 RRQEERLREQEERLHEQEERLHEQEERLCEQEERLCEQEER-LREQEERLREQEERLHEQ 253
Query: 706 QKNL 709
++ L
Sbjct: 254 EERL 257
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQS 704
+R+ + + + ++ L E +E+L Q +R + ++R ++++ L EQ ERL E+ E
Sbjct: 201 LREQEERLHEQEERLHEQEERLCEQEERLCEQEERLREQEER-LREQEERLHEQEERLCE 259
Query: 705 EQKNL 709
+++ L
Sbjct: 260 QEERL 264
Score = 30.0 bits (66), Expect = 8.7
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRK----DGVLEEQIERLQEKVE 700
+R+ + + + ++ L E +E+L Q +R + ++R +++ L E++E+L E+ E
Sbjct: 236 LREQEERLREQEERLHEQEERLCEQEERLCEQEERLCEQEKLPGQERLLEEVEKLLEQ-E 294
Query: 701 SAQSEQKNL 709
Q EQ+ L
Sbjct: 295 RRQEEQERL 303
>gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 33.9 bits (76), Expect = 0.60
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGV-LEEQIERLQEKV---- 699
IR+ + + K ++ L+E EKL + K +S ++ +++ K + LE+Q++ LQEK+
Sbjct: 335 IREQEERLRKQEERLQEQHEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKLGEVK 394
Query: 700 ESAQSEQK 707
E+ S QK
Sbjct: 395 ETETSAQK 402
>gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 33.9 bits (76), Expect = 0.60
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGV-LEEQIERLQEKV---- 699
IR+ + + K ++ L+E EKL + K +S ++ +++ K + LE+Q++ LQEK+
Sbjct: 335 IREQEERLRKQEERLQEQHEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKLGEVK 394
Query: 700 ESAQSEQK 707
E+ S QK
Sbjct: 395 ETETSAQK 402
>gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 595
Score = 33.9 bits (76), Expect = 0.60
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGV-LEEQIERLQEKV---- 699
IR+ + + K ++ L+E EKL + K +S ++ +++ K + LE+Q++ LQEK+
Sbjct: 335 IREQEERLRKQEERLQEQHEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKLGEVK 394
Query: 700 ESAQSEQK 707
E+ S QK
Sbjct: 395 ETETSAQK 402
>gi|169208016 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 8E isoform 1 [Homo sapiens]
Length = 594
Score = 33.9 bits (76), Expect = 0.60
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 645 IRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGV-LEEQIERLQEKV---- 699
IR+ + + K ++ L+E EKL + K +S ++ +++ K + LE+Q++ LQEK+
Sbjct: 334 IREQEERLRKQEERLQEQHEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKLGEVK 393
Query: 700 ESAQSEQK 707
E+ S QK
Sbjct: 394 ETETSAQK 401
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,708,376
Number of Sequences: 37866
Number of extensions: 1486079
Number of successful extensions: 6640
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 6125
Number of HSP's gapped (non-prelim): 731
length of query: 790
length of database: 18,247,518
effective HSP length: 110
effective length of query: 680
effective length of database: 14,082,258
effective search space: 9575935440
effective search space used: 9575935440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.