NCBP1 29032

Name: NCBP1	Sequence: fasta or formatted (790aa)		NCBI GI: 4505343
Description: nuclear cap binding protein subunit 1, 80kDa		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 47 2 C cysteine 2.4 19 1 D aspartate 5.7 45 5 E glutamate 8.0 63 2 F phenylalanine 5.1 40 1 G glycine 2.4 19 2 H histidine 3.8 30 2 I isoleucine 5.2 41 2 K lysine 6.1 48 2 L leucine 11.0 87 2 M methionine 2.5 20 1 N asparagine 4.1 32 2 P proline 5.2 41 3 Q glutamine 4.9 39 2 R arginine 5.4 43 3 S serine 6.6 52 2 T threonine 4.3 34 2 V valine 6.8 54 1 W tryptophan 1.8 14 1 Y tyrosine 2.8 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear cap binding protein subunit 1, 80kDa GBP4 0.011 guanylate binding protein 4 CCDC46 0.008 coiled-coil domain containing 46 isoform a RNF20 0.007 ring finger protein 20 PACSIN1 0.007 protein kinase C and casein kinase substrate in neur... UBTFL6 0.007 PREDICTED: upstream binding transcription factor, R... UBTFL6 0.007 PREDICTED: upstream binding transcription factor, R... UBTFL6 0.007 PREDICTED: upstream binding transcription factor, R... GOLGA4 0.007 golgi autoantigen, golgin subfamily a, 4 CDC42BPB 0.007 CDC42-binding protein kinase beta TPM2 0.006 tropomyosin 2 (beta) isoform 2 TPM2 0.006 tropomyosin 2 (beta) isoform 1 TRIP11 0.006 thyroid hormone receptor interactor 11 HOMER2 0.006 homer 2 isoform 1 BAZ1A 0.006 bromodomain adjacent to zinc finger domain, 1A isofo... BAZ1A 0.006 bromodomain adjacent to zinc finger domain, 1A isofo... PLEKHA7 0.006 pleckstrin homology domain containing, family A mem... GOLGB1 0.006 golgi autoantigen, golgin subfamily b, macrogolgin ... C1orf114 0.006 hypothetical protein LOC57821 CCAR1 0.006 cell-cycle and apoptosis regulatory protein 1 C14orf38 0.006 PREDICTED: hypothetical protein C14orf38 0.006 PREDICTED: hypothetical protein C14orf38 0.006 PREDICTED: hypothetical protein NARG1L 0.006 NMDA receptor regulated 1-like protein isoform 1 [Ho... LOC100133220 0.006 PREDICTED: hypothetical protein LOC647042 0.006 PREDICTED: hypothetical protein isoform 1 LOC728080 0.006 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728047 0.006 PREDICTED: similar to Golgin subfamily A member 8-l... LOC727909 0.006 PREDICTED: similar to Golgin subfamily A member 8-l... LOC643699 0.006 PREDICTED: similar to golgi autoantigen, golgin sub... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.