Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 13128960
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13128960 connexin 31 [Homo sapiens]
(270 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|54607056 connexin 31 [Homo sapiens] 575 e-164
gi|13128960 connexin 31 [Homo sapiens] 575 e-164
gi|23397464 gap junction protein, beta 4 [Homo sapiens] 319 1e-87
gi|10835079 gap junction protein, beta 5, 31.1kDa [Homo sapiens] 310 9e-85
gi|42558283 gap junction protein beta 2 [Homo sapiens] 260 8e-70
gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens] 257 9e-69
gi|159032020 gap junction protein, beta 6 [Homo sapiens] 255 3e-68
gi|158966714 gap junction protein, beta 6 [Homo sapiens] 255 3e-68
gi|158966717 gap junction protein, beta 6 [Homo sapiens] 255 3e-68
gi|40254837 gap junction protein, beta 6 [Homo sapiens] 255 3e-68
gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens] 249 1e-66
gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens] 249 1e-66
gi|62865885 connexin 37 [Homo sapiens] 199 2e-51
gi|55953076 connexin 50 [Homo sapiens] 190 1e-48
gi|4504001 connexin 43 [Homo sapiens] 189 3e-48
gi|22779877 connexin 46 [Homo sapiens] 186 2e-47
gi|14211941 gap junction protein, alpha 10 [Homo sapiens] 179 2e-45
gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens] 173 1e-43
gi|32483412 connexin 40 [Homo sapiens] 161 5e-40
gi|6631083 connexin 40 [Homo sapiens] 161 5e-40
gi|122939172 connexin 45 [Homo sapiens] 138 6e-33
gi|69122473 connexin 45 [Homo sapiens] 138 6e-33
gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens] 135 4e-32
gi|145699105 connexin40.1 [Homo sapiens] 122 4e-28
gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens] 118 6e-27
gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens] 107 8e-24
gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens] 102 4e-22
gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens] 76 4e-14
gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens] 76 4e-14
gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens] 76 4e-14
>gi|54607056 connexin 31 [Homo sapiens]
Length = 270
Score = 575 bits (1482), Expect = e-164
Identities = 270/270 (100%), Positives = 270/270 (100%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
Sbjct: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA 120
TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
Sbjct: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA 120
Query: 121 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR 180
GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
Sbjct: 121 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR 180
Query: 181 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR 240
PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
Sbjct: 181 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR 240
Query: 241 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI 270
CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
Sbjct: 241 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI 270
>gi|13128960 connexin 31 [Homo sapiens]
Length = 270
Score = 575 bits (1482), Expect = e-164
Identities = 270/270 (100%), Positives = 270/270 (100%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
Sbjct: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA 120
TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
Sbjct: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA 120
Query: 121 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR 180
GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
Sbjct: 121 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR 180
Query: 181 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR 240
PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
Sbjct: 181 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR 240
Query: 241 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI 270
CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
Sbjct: 241 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI 270
>gi|23397464 gap junction protein, beta 4 [Homo sapiens]
Length = 266
Score = 319 bits (818), Expect = 1e-87
Identities = 154/264 (58%), Positives = 187/264 (70%), Gaps = 9/264 (3%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
M+W LQ LLSGVNKYST RIWLSVVF+FRVLVYVVAAE VW DEQKDF CNTKQPGC
Sbjct: 1 MNWAFLQGLLSGVNKYSTVLSRIWLSVVFIFRVLVYVVAAEEVWDDEQKDFVCNTKQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA 120
NVCYD +FP+S++RLWALQLI VTCPSLLV++HVAYREERER+H KHG LYDN
Sbjct: 61 PNVCYDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREERERKHHLKHGPNAPSLYDNL 120
Query: 121 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR 180
KK GGLWWTYL SLIFK ++ FLY+ H L+ ++MPR+V C +V PCP+ VDCYI+R
Sbjct: 121 SKKRGGLWWTYLLSLIFKAAVDAGFLYIFHRLYKDYDMPRVVAC-SVEPCPHTVDCYISR 179
Query: 181 PTEKKIFTYFMVGASAVCIVLTICELCYLI---CHRVLRGLHKDKPRGGCSPSSSASRAS 237
PTEKK+FTYFMV +A+CI+L + E+ YL+ C + H+ C P +
Sbjct: 180 PTEKKVFTYFMVTTAAICILLNLSEVFYLVGKRCMEIFGPRHRRPRCRECLPDTCPPYVL 239
Query: 238 TCRCHHK-----LVEAGEVDPDPG 256
+ H + L++AG D G
Sbjct: 240 SQGGHPEDGNSVLMKAGSAPVDAG 263
>gi|10835079 gap junction protein, beta 5, 31.1kDa [Homo sapiens]
Length = 273
Score = 310 bits (794), Expect = 9e-85
Identities = 137/240 (57%), Positives = 182/240 (75%), Gaps = 1/240 (0%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
M+W + LLSGVNKYSTAFGRIWLS+VF+FRVLVY+V AERVW D+ KDFDCNT+QPGC
Sbjct: 1 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA 120
+NVC+D +FP+S++RLWALQLI VTCPSLLV++HVAYRE +E+RHR+ HG+ +LY N
Sbjct: 61 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP 120
Query: 121 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR 180
GKK GGLWWTY+ SL+FK ++ FLY+ H+ + + +P +V+C + PCPNIVDC+I++
Sbjct: 121 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKC-HADPCPNIVDCFISK 179
Query: 181 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR 240
P+EK IFT FMV +A+CI+L + EL YL+ R L K + C+ S+C+
Sbjct: 180 PSEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCK 239
>gi|42558283 gap junction protein beta 2 [Homo sapiens]
Length = 226
Score = 260 bits (665), Expect = 8e-70
Identities = 120/216 (55%), Positives = 160/216 (74%), Gaps = 8/216 (3%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
MDW TLQ +L GVNK+ST+ G+IWL+V+F+FR+++ VVAA+ VWGDEQ DF CNT QPGC
Sbjct: 1 MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA 120
NVCYD+YFPIS+IRLWALQLIFV+ P+LLV +HVAYR ++R K G+ ++ D
Sbjct: 61 KNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFIK-GEIKSEFKDIE 119
Query: 121 GKK------HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIV 174
K G LWWTY S+ F++I E F+Y+ + ++ GF+M RLV+C N PCPN V
Sbjct: 120 EIKTQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKC-NAWPCPNTV 178
Query: 175 DCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLI 210
DC+++RPTEK +FT FM+ S +CI+L + ELCYL+
Sbjct: 179 DCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLL 214
>gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens]
Length = 223
Score = 257 bits (656), Expect = 9e-69
Identities = 124/210 (59%), Positives = 157/210 (74%), Gaps = 8/210 (3%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
M W L+ LLSGVNKYST G IWL+VVFVFR+LVY+VAAE VW DEQK+F+CN++QPGC
Sbjct: 1 MSWMFLRDLLSGVNKYSTGTGWIWLAVVFVFRLLVYMVAAEHVWKDEQKEFECNSRQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA 120
NVC+D++FPIS +RLWALQLI V+ PSLLV+LHVAY E RE+RHR+ KLY +
Sbjct: 61 KNVCFDDFFPISQVRLWALQLIMVSTPSLLVVLHVAYHEGREKRHRK-------KLYVSP 113
Query: 121 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR 180
G GGLW+ YL SLI K E FL L + L+ GF++P L++C ++ PCPN VDC+I++
Sbjct: 114 GTMDGGLWYAYLISLIVKTGFEIGFLVLFYKLYDGFSVPYLIKC-DLKPCPNTVDCFISK 172
Query: 181 PTEKKIFTYFMVGASAVCIVLTICELCYLI 210
PTEK IF F+V S +CIVL EL +L+
Sbjct: 173 PTEKTIFILFLVITSCLCIVLNFIELSFLV 202
>gi|159032020 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 255 bits (651), Expect = 3e-68
Identities = 112/215 (52%), Positives = 162/215 (75%), Gaps = 6/215 (2%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
MDW TL + GVNK+ST+ G++W++V+F+FRV++ VVAA+ VWGDEQ+DF CNT QPGC
Sbjct: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVA-YREERERRHRQKHGDQCAKLYDN 119
NVCYD++FP+S+IRLWALQLIFV+ P+LLV +HVA YR E R+ R+ K ++
Sbjct: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
Query: 120 AGKK----HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVD 175
K+ G LWWTY S+ F++I E F+Y+ + L++G+++P +++C + PCPN+VD
Sbjct: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKC-GIDPCPNLVD 179
Query: 176 CYIARPTEKKIFTYFMVGASAVCIVLTICELCYLI 210
C+I+RPTEK +FT FM+ AS +C++L + ELCYL+
Sbjct: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLL 214
>gi|158966714 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 255 bits (651), Expect = 3e-68
Identities = 112/215 (52%), Positives = 162/215 (75%), Gaps = 6/215 (2%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
MDW TL + GVNK+ST+ G++W++V+F+FRV++ VVAA+ VWGDEQ+DF CNT QPGC
Sbjct: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVA-YREERERRHRQKHGDQCAKLYDN 119
NVCYD++FP+S+IRLWALQLIFV+ P+LLV +HVA YR E R+ R+ K ++
Sbjct: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
Query: 120 AGKK----HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVD 175
K+ G LWWTY S+ F++I E F+Y+ + L++G+++P +++C + PCPN+VD
Sbjct: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKC-GIDPCPNLVD 179
Query: 176 CYIARPTEKKIFTYFMVGASAVCIVLTICELCYLI 210
C+I+RPTEK +FT FM+ AS +C++L + ELCYL+
Sbjct: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLL 214
>gi|158966717 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 255 bits (651), Expect = 3e-68
Identities = 112/215 (52%), Positives = 162/215 (75%), Gaps = 6/215 (2%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
MDW TL + GVNK+ST+ G++W++V+F+FRV++ VVAA+ VWGDEQ+DF CNT QPGC
Sbjct: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVA-YREERERRHRQKHGDQCAKLYDN 119
NVCYD++FP+S+IRLWALQLIFV+ P+LLV +HVA YR E R+ R+ K ++
Sbjct: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
Query: 120 AGKK----HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVD 175
K+ G LWWTY S+ F++I E F+Y+ + L++G+++P +++C + PCPN+VD
Sbjct: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKC-GIDPCPNLVD 179
Query: 176 CYIARPTEKKIFTYFMVGASAVCIVLTICELCYLI 210
C+I+RPTEK +FT FM+ AS +C++L + ELCYL+
Sbjct: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLL 214
>gi|40254837 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 255 bits (651), Expect = 3e-68
Identities = 112/215 (52%), Positives = 162/215 (75%), Gaps = 6/215 (2%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
MDW TL + GVNK+ST+ G++W++V+F+FRV++ VVAA+ VWGDEQ+DF CNT QPGC
Sbjct: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVA-YREERERRHRQKHGDQCAKLYDN 119
NVCYD++FP+S+IRLWALQLIFV+ P+LLV +HVA YR E R+ R+ K ++
Sbjct: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
Query: 120 AGKK----HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVD 175
K+ G LWWTY S+ F++I E F+Y+ + L++G+++P +++C + PCPN+VD
Sbjct: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKC-GIDPCPNLVD 179
Query: 176 CYIARPTEKKIFTYFMVGASAVCIVLTICELCYLI 210
C+I+RPTEK +FT FM+ AS +C++L + ELCYL+
Sbjct: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLL 214
>gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 249 bits (637), Expect = 1e-66
Identities = 116/223 (52%), Positives = 163/223 (73%), Gaps = 11/223 (4%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
M+W L LLSGVN++STA GR+WLSV+F+FR++V VVAAE VWGDE+ F CNT QPGC
Sbjct: 1 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERR--HRQKHGDQCAKLYD 118
+VCYD +FPIS++RLW+LQLI V+ P+LLV +HVA+++ E++ + HGD L+
Sbjct: 61 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGD---PLHL 117
Query: 119 NAGKKH-----GGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNI 173
K+H G LWWTY+ S++F+L+ E +F+Y+ + L+ G+ M RLV+C +V PCPN
Sbjct: 118 EEVKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKC-DVYPCPNT 176
Query: 174 VDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLR 216
VDC+++RPTEK +FT FM+ AS +CI+L + E+ YLI R
Sbjct: 177 VDCFVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACAR 219
>gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 249 bits (637), Expect = 1e-66
Identities = 116/223 (52%), Positives = 163/223 (73%), Gaps = 11/223 (4%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
M+W L LLSGVN++STA GR+WLSV+F+FR++V VVAAE VWGDE+ F CNT QPGC
Sbjct: 1 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERR--HRQKHGDQCAKLYD 118
+VCYD +FPIS++RLW+LQLI V+ P+LLV +HVA+++ E++ + HGD L+
Sbjct: 61 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGD---PLHL 117
Query: 119 NAGKKH-----GGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNI 173
K+H G LWWTY+ S++F+L+ E +F+Y+ + L+ G+ M RLV+C +V PCPN
Sbjct: 118 EEVKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKC-DVYPCPNT 176
Query: 174 VDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLR 216
VDC+++RPTEK +FT FM+ AS +CI+L + E+ YLI R
Sbjct: 177 VDCFVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACAR 219
>gi|62865885 connexin 37 [Homo sapiens]
Length = 333
Score = 199 bits (507), Expect = 2e-51
Identities = 105/240 (43%), Positives = 145/240 (60%), Gaps = 25/240 (10%)
Query: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
DW L+ LL V ++ST G+IWL+V+F+FR+L+ +A E VWGDEQ DF+CNT QPGCT
Sbjct: 3 DWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPGCT 62
Query: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGD---------- 111
NVCYD FPIS+IR W LQ +FV+ P+L+ + HV Y RE R RQK G+
Sbjct: 63 NVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKDPQ 122
Query: 112 ----------QCAKL---YDNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNM 158
Q AK+ D + G L TY+ S++ K ++E FLY L +G+ M
Sbjct: 123 VERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRL-YGWTM 181
Query: 159 PRLVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGL 218
+ C APCP +VDC+++RPTEK IF FM+ + +VL + EL +L+C + RG+
Sbjct: 182 EPVFVCQR-APCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGM 240
>gi|55953076 connexin 50 [Homo sapiens]
Length = 433
Score = 190 bits (482), Expect = 1e-48
Identities = 100/227 (44%), Positives = 141/227 (62%), Gaps = 21/227 (9%)
Query: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
DW L +L VN++ST GR+WL+V+F+FR+L+ AAE VWGDEQ DF CNT+QPGC
Sbjct: 3 DWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQPGCE 62
Query: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILH----VAYREERERRHRQKHGDQC---- 113
NVCYD FPIS+IRLW LQ+IFV+ PSL+ + H V E+R+ R ++ G Q
Sbjct: 63 NVCYDEAFPISHIRLWVLQIIFVSTPSLMYVGHAVHYVRMEEKRKSREAEELGQQAGTNG 122
Query: 114 ----AKLYDNAGKK-------HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLV 162
+ ++G K G L TY+ +IFK + E F+ + H +GF + L
Sbjct: 123 GPDQGSVKKSSGSKGTKKFRLEGTLLRTYICHIIFKTLFEVGFI-VGHYFLYGFRILPLY 181
Query: 163 QCANVAPCPNIVDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYL 209
+C+ PCPN+VDC+++RPTEK IF FM+ ++V + L + EL +L
Sbjct: 182 RCSR-WPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNVMELGHL 227
>gi|4504001 connexin 43 [Homo sapiens]
Length = 382
Score = 189 bits (479), Expect = 3e-48
Identities = 105/258 (40%), Positives = 140/258 (54%), Gaps = 30/258 (11%)
Query: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
DW L LL V YSTA G++WLSV+F+FR+L+ A E WGDEQ F CNT+QPGC
Sbjct: 3 DWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPGCE 62
Query: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNAG 121
NVCYD FPIS++R W LQ+IFV+ P+LL + HV Y +E + +K + D
Sbjct: 63 NVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNKKEEELKVAQTDGVN 122
Query: 122 -----------------------KKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNM 158
K GGL TY+ S++FK I E FL L+ +GF++
Sbjct: 123 VDMHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSIFEVAFL-LIQWYIYGFSL 181
Query: 159 PRLVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGL 218
+ C PCP+ VDC+++RPTEK IF FM+ S V + L I EL Y+ V
Sbjct: 182 SAVYTCKR-DPCPHQVDCFLSRPTEKTIFIIFMLVVSLVSLALNIIELFYVFFKGV---- 236
Query: 219 HKDKPRGGCSPSSSASRA 236
KD+ +G P + S A
Sbjct: 237 -KDRVKGKSDPYHATSGA 253
>gi|22779877 connexin 46 [Homo sapiens]
Length = 435
Score = 186 bits (471), Expect = 2e-47
Identities = 99/234 (42%), Positives = 142/234 (60%), Gaps = 19/234 (8%)
Query: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
DW L LL ++ST G++WL+V+F+FR+LV AAE VWGDEQ DF CNT+QPGC
Sbjct: 3 DWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPGCE 62
Query: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAY-------REERERRHRQKHGDQCA 114
NVCYD FPIS+IR WALQ+IFV+ P+L+ + HV + ++ERE + K
Sbjct: 63 NVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEEKKKEREEEEQLKRESPSP 122
Query: 115 K--LYDNAGKKH--------GGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQC 164
K DN + G L TY+F++IFK + E F+ + L +GF + L +C
Sbjct: 123 KEPPQDNPSSRDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFL-YGFELKPLYRC 181
Query: 165 ANVAPCPNIVDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGL 218
+ PCPN VDC+I+RPTEK IF FM+ + ++L + E+ +L ++ +G+
Sbjct: 182 -DRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWKKLKQGV 234
>gi|14211941 gap junction protein, alpha 10 [Homo sapiens]
Length = 543
Score = 179 bits (455), Expect = 2e-45
Identities = 107/298 (35%), Positives = 159/298 (53%), Gaps = 36/298 (12%)
Query: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
DW L +L V+ +ST G+IWL+++F+FR+LV VAAE VW DEQ F CNT+QPGC
Sbjct: 3 DWNLLGGILEEVHSHSTIVGKIWLTILFIFRMLVLRVAAEDVWDDEQSAFACNTRQPGCN 62
Query: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYRE---ERERRHRQKHG-------- 110
N+CYD+ FPIS IR W LQ+IFV+ PSL+ + H YR E++R+ ++ H
Sbjct: 63 NICYDDAFPISLIRFWVLQIIFVSSPSLVYMGHALYRLRAFEKDRQRKKSHLRAQMENPD 122
Query: 111 ---------DQCAKLYDNAGKKH-----GGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGF 156
D+ + + + H G L TY+ ++ + ++E F+ + L+ GF
Sbjct: 123 LDLEEQQRIDRELRRLEEQKRIHKVPLKGCLLRTYVLHILTRSVLEVGFMIGQYILY-GF 181
Query: 157 NMPRLVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLR 216
M L +C PCPN VDC+++RPTEK IF FM +A+ ++L I E+ +L +++R
Sbjct: 182 QMHPLYKCTQ-PPCPNAVDCFVSRPTEKTIFMLFMHSIAAISLLLNILEIFHLGIRKIMR 240
Query: 217 GLHKDKPRGGCSPSSSA-------SRASTCRCHHKLVEAGEVDPDPGNNKLQASAPNL 267
L+K G + S A C L E + P NN+ Q N+
Sbjct: 241 TLYKKSSSEGIEDETGPPFHLKKYSVAQQCMICSSLPE--RISPLQANNQQQVIRVNV 296
>gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens]
Length = 515
Score = 173 bits (439), Expect = 1e-43
Identities = 98/242 (40%), Positives = 137/242 (56%), Gaps = 27/242 (11%)
Query: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
DW L L V+ +ST G+IWL+++F+FR+LV VAAE VW DEQ F CNT+QPGC
Sbjct: 3 DWNLLGDTLEEVHIHSTMIGKIWLTILFIFRMLVLGVAAEDVWNDEQSGFICNTEQPGCR 62
Query: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYR----EE----------------- 100
NVCYD FPIS IR W LQ+IFV+ PSL+ + H YR EE
Sbjct: 63 NVCYDQAFPISLIRYWVLQVIFVSSPSLVYMGHALYRLRVLEEERQRMKAQLRVELEEVE 122
Query: 101 ----RERRHRQKHGDQCAKLYDNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGF 156
R+RR ++ Q K N G L TY+ + + ++E F+ + L +GF
Sbjct: 123 FEMPRDRRRLEQELCQLEKRKLNKAPLRGTLLCTYVIHIFTRSVVEVGFM-IGQYLLYGF 181
Query: 157 NMPRLVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLR 216
++ L +C + PCPNI+DC+++RPTEK IF FM + + + L I E+ +L ++ R
Sbjct: 182 HLEPLFKC-HGHPCPNIIDCFVSRPTEKTIFLLFMQSIATISLFLNILEIFHLGFKKIKR 240
Query: 217 GL 218
GL
Sbjct: 241 GL 242
>gi|32483412 connexin 40 [Homo sapiens]
Length = 358
Score = 161 bits (408), Expect = 5e-40
Identities = 83/229 (36%), Positives = 133/229 (58%), Gaps = 23/229 (10%)
Query: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
DW L L V+K+ST G++WL+V+F+FR+LV AAE WGDEQ DF C+T QPGC
Sbjct: 3 DWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQ 62
Query: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNAG 121
NVCYD FPIS+IR W LQ+IFV+ PSL+ + H + + + + + ++ ++ +
Sbjct: 63 NVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGSGS 122
Query: 122 KKH---------------------GGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPR 160
++ G L TY+ S++ + +E F+ + + +G +
Sbjct: 123 YEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFI-YGIFLTT 181
Query: 161 LVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYL 209
L C +PCP+ V+CY++RPTEK +F FM+ +A+ ++L++ EL +L
Sbjct: 182 LHVCRR-SPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHL 229
>gi|6631083 connexin 40 [Homo sapiens]
Length = 358
Score = 161 bits (408), Expect = 5e-40
Identities = 83/229 (36%), Positives = 133/229 (58%), Gaps = 23/229 (10%)
Query: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
DW L L V+K+ST G++WL+V+F+FR+LV AAE WGDEQ DF C+T QPGC
Sbjct: 3 DWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQ 62
Query: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNAG 121
NVCYD FPIS+IR W LQ+IFV+ PSL+ + H + + + + + ++ ++ +
Sbjct: 63 NVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGSGS 122
Query: 122 KKH---------------------GGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPR 160
++ G L TY+ S++ + +E F+ + + +G +
Sbjct: 123 YEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFI-YGIFLTT 181
Query: 161 LVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYL 209
L C +PCP+ V+CY++RPTEK +F FM+ +A+ ++L++ EL +L
Sbjct: 182 LHVCRR-SPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHL 229
>gi|122939172 connexin 45 [Homo sapiens]
Length = 396
Score = 138 bits (347), Expect = 6e-33
Identities = 78/255 (30%), Positives = 128/255 (50%), Gaps = 48/255 (18%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
M W L LL ++ +ST G+IWL+V+ VFR+++ V E ++ DEQ F CNT+QPGC
Sbjct: 1 MSWSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVI---LH---------------------VA 96
NVCYD + P+S++R W Q+I V PS++ + +H +
Sbjct: 61 ENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHGEADKKAARSKPYAMR 120
Query: 97 YREERERRHRQKHGDQCAKLY-------DNAGK---------------KHGGLWWTYLFS 134
+++ R ++ ++ +Y D K + GL Y+
Sbjct: 121 WKQHRALEETEEDNEEDPMMYPEMELESDKENKEQSQPKPKHDGRRRIREDGLMKIYVLQ 180
Query: 135 LIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGA 194
L+ + + E FL + L +GF + C+ + PCP+ +DC+I+RPTEK IF M G
Sbjct: 181 LLARTVFEVGFLIGQYFL-YGFQVHPFYVCSRL-PCPHKIDCFISRPTEKTIFLLIMYGV 238
Query: 195 SAVCIVLTICELCYL 209
+ +C++L I E+ +L
Sbjct: 239 TGLCLLLNIWEMLHL 253
>gi|69122473 connexin 45 [Homo sapiens]
Length = 396
Score = 138 bits (347), Expect = 6e-33
Identities = 78/255 (30%), Positives = 128/255 (50%), Gaps = 48/255 (18%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
M W L LL ++ +ST G+IWL+V+ VFR+++ V E ++ DEQ F CNT+QPGC
Sbjct: 1 MSWSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGC 60
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVI---LH---------------------VA 96
NVCYD + P+S++R W Q+I V PS++ + +H +
Sbjct: 61 ENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHGEADKKAARSKPYAMR 120
Query: 97 YREERERRHRQKHGDQCAKLY-------DNAGK---------------KHGGLWWTYLFS 134
+++ R ++ ++ +Y D K + GL Y+
Sbjct: 121 WKQHRALEETEEDNEEDPMMYPEMELESDKENKEQSQPKPKHDGRRRIREDGLMKIYVLQ 180
Query: 135 LIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGA 194
L+ + + E FL + L +GF + C+ + PCP+ +DC+I+RPTEK IF M G
Sbjct: 181 LLARTVFEVGFLIGQYFL-YGFQVHPFYVCSRL-PCPHKIDCFISRPTEKTIFLLIMYGV 238
Query: 195 SAVCIVLTICELCYL 209
+ +C++L I E+ +L
Sbjct: 239 TGLCLLLNIWEMLHL 253
>gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens]
Length = 294
Score = 135 bits (340), Expect = 4e-32
Identities = 84/262 (32%), Positives = 127/262 (48%), Gaps = 31/262 (11%)
Query: 2 DWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCT 61
+W L +LL V S GR+WL V+ +FR+LV V+ DEQ++F CNT QPGC
Sbjct: 3 EWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCR 62
Query: 62 NVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGD--------QC 113
CYD FP+S+ R W ++ ++ P +L +++ +R +E + QC
Sbjct: 63 QTCYDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRAGKEAGGAEAAAQCAPGLPEAQC 122
Query: 114 AKLYDNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNI 173
A A + YL S+ +L+ E FL L +GF + CA PCP+
Sbjct: 123 APCALRARRARR----CYLLSVALRLLAELTFLG-GQALLYGFRVAPHFACAG-PPCPHT 176
Query: 174 VDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSA 233
VDC+++RPTEK +F F + +L++ EL +L L K +PR G
Sbjct: 177 VDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHL--------LWKGRPRAG------- 221
Query: 234 SRASTCRCHHKLVEAGEVDPDP 255
R + C H+ EA ++ P P
Sbjct: 222 ERDNRCNRAHE--EAQKLLPPP 241
>gi|145699105 connexin40.1 [Homo sapiens]
Length = 370
Score = 122 bits (305), Expect = 4e-28
Identities = 82/271 (30%), Positives = 129/271 (47%), Gaps = 29/271 (10%)
Query: 9 LLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCYDNY 68
L+ +N T G++W + + R+LV V+A V+ DEQ+ F CNT QPGC NVCYD +
Sbjct: 10 LIITLNCNVTMVGKLWFVLTMLLRMLVIVLAGRPVYQDEQERFVCNTLQPGCANVCYDVF 69
Query: 69 FPISNIRLWALQLIFVTCPSLLVILHVAYR-------------EERERRHRQKHGDQCAK 115
P+S++R W +Q + V PS + ++V +R + RE Q+ +C +
Sbjct: 70 SPVSHLRFWLIQGVCVLLPSAVFSVYVLHRGATLAALGPRRCPDPREPASGQR---RCPR 126
Query: 116 LY-DNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIV 174
+ + G + Y+ L+ + ++E F LH GF P+ C PC +V
Sbjct: 127 PFGERGGLQVPDFSAGYIIHLLLRTLLEAAF-GALHYFLFGFLAPKKFPCTR-PPCTGVV 184
Query: 175 DCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSAS 234
DCY++RPTEK + F+ SA+ +L + +L + R+ R R G S S
Sbjct: 185 DCYVSRPTEKSLLMLFLWAVSALSFLLGLADLVCSLRRRMRR-------RPGPPTSPSIR 237
Query: 235 RASTCRCHHKLVEAGEVDPDPGNNKLQASAP 265
+ S H E D + G + A AP
Sbjct: 238 KQSGASGH---AEGRRTDEEGGREEEGAPAP 265
>gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens]
Length = 279
Score = 118 bits (295), Expect = 6e-27
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 12/212 (5%)
Query: 6 LQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCY 65
L+ LL+ ++ ST GR+ L V+ FR+++ + V+GDEQ +F C+T+QPGC C+
Sbjct: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
Query: 66 DNYFPISNIRLWALQLIFVTCPSLL----VILHVAYREERERRHRQK----HGDQCAKLY 117
D + P+S +R W Q+I V PS L + HV + E + +++ G +
Sbjct: 66 DAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGREGNTDV 125
Query: 118 DNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCY 177
AG L W Y+ L +L++E L L + L +GF MP C PC + C
Sbjct: 126 PGAGSLR--LLWAYVAQLGARLVLEGAALGLQYHL-YGFQMPSSFACRR-EPCLGSITCN 181
Query: 178 IARPTEKKIFTYFMVGASAVCIVLTICELCYL 209
++RP+EK IF M G S C++ T EL L
Sbjct: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLL 213
>gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens]
Length = 439
Score = 107 bits (268), Expect = 8e-24
Identities = 46/120 (38%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
M W L LL ++ +ST G++WL+V+ VFR+++ V E ++ DEQ F CNT+QPGC
Sbjct: 4 MSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQPGC 63
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYR------EERERRHRQKHGDQCA 114
NVCYD + P+S++R W Q++ ++ PS++ + + +R +ER R R++ G + A
Sbjct: 64 DNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGPRRA 123
Score = 65.9 bits (159), Expect = 4e-11
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 126 GLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIARPTEKK 185
GL Y+ L+ + E FL + L+ GF + C+ PCP++VDC+++RPTEK
Sbjct: 208 GLMRVYVAQLVARAAFEVAFLVGQYLLY-GFEVRPFFPCSR-QPCPHVVDCFVSRPTEKT 265
Query: 186 IFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSA 233
+F M S +C++L +CE+ +L G +D RG P +SA
Sbjct: 266 VFLLVMYVVSCLCLLLNLCEMAHLGL-----GSAQDAVRGRRGPPASA 308
>gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens]
Length = 321
Score = 102 bits (254), Expect = 4e-22
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 2 DWKTLQALL-SGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
+W L+ LL + V ++ST GRI L+VV +FR+L+ + E V+ DEQ F CNT QPGC
Sbjct: 3 EWTILERLLEAAVQQHSTMIGRILLTVVVIFRILIVAIVGETVYDDEQTMFVCNTLQPGC 62
Query: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHR 106
CYD FPIS+IR W Q+I V PSL I + ++ ++R R
Sbjct: 63 NQACYDRAFPISHIRYWVFQIIMVCTPSLCFITYSVHQSAKQRERR 108
Score = 66.6 bits (161), Expect = 2e-11
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 122 KKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIARP 181
++ G+ Y+ ++F+ +E FL + L+ GF++P L +C N PC V+CY++RP
Sbjct: 190 RRQEGISRFYIIQVVFRNALEIGFLVGQYFLY-GFSVPGLYEC-NRYPCIKEVECYVSRP 247
Query: 182 TEKKIFTYFMVGASAVCIVLTICELCYL 209
TEK +F FM S +C+VL + EL +L
Sbjct: 248 TEKTVFLVFMFAVSGICVVLNLAELNHL 275
>gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 75.9 bits (185), Expect = 4e-14
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 9 LLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCYDNY 68
LL+ + +ST GR+ V+ FR+++ + V+GDEQ +F C+T+QPGC C+D +
Sbjct: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
Query: 69 FPISNIRLWALQLIFVTCPSLLVILHV-------AYRE-----ERERRHRQKHGDQCAKL 116
P+S +R W Q+I V PS+L + + YRE E R A L
Sbjct: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESGVFQYREPPRCGPSEVLERAPRPPAPATL 147
Query: 117 YDNAGKKHGGLWWTYLF 133
G+ GGL + LF
Sbjct: 148 PAFVGRSDGGLRLSVLF 164
>gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 75.9 bits (185), Expect = 4e-14
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 9 LLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCYDNY 68
LL+ + +ST GR+ V+ FR+++ + V+GDEQ +F C+T+QPGC C+D +
Sbjct: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
Query: 69 FPISNIRLWALQLIFVTCPSLLVILHV-------AYRE-----ERERRHRQKHGDQCAKL 116
P+S +R W Q+I V PS+L + + YRE E R A L
Sbjct: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESGVFQYREPPRCGPSEVLERAPRPPAPATL 147
Query: 117 YDNAGKKHGGLWWTYLF 133
G+ GGL + LF
Sbjct: 148 PAFVGRSDGGLRLSVLF 164
>gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 75.9 bits (185), Expect = 4e-14
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 9 LLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCYDNY 68
LL+ + +ST GR+ V+ FR+++ + V+GDEQ +F C+T+QPGC C+D +
Sbjct: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
Query: 69 FPISNIRLWALQLIFVTCPSLLVILHV-------AYRE-----ERERRHRQKHGDQCAKL 116
P+S +R W Q+I V PS+L + + YRE E R A L
Sbjct: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESGVFQYREPPRCGPSEVLERAPRPPAPATL 147
Query: 117 YDNAGKKHGGLWWTYLF 133
G+ GGL + LF
Sbjct: 148 PAFVGRSDGGLRLSVLF 164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.141 0.474
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,305,946
Number of Sequences: 37866
Number of extensions: 504821
Number of successful extensions: 1655
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1585
Number of HSP's gapped (non-prelim): 42
length of query: 270
length of database: 18,247,518
effective HSP length: 101
effective length of query: 169
effective length of database: 14,423,052
effective search space: 2437495788
effective search space used: 2437495788
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.