Guide to the Human Genome
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Name: ZFR2 Sequence: fasta or formatted (70aa) NCBI GI: 224548932
Description:

zinc finger RNA binding protein 2 isoform 2

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [939aa] zinc finger RNA binding protein 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.9          9           1
 C cysteine            7.1          5           1
 D aspartate           4.3          3           1
 E glutamate           2.9          2           1
 F phenylalanine       2.9          2           1
 G glycine            10.0          7           3
 H histidine           0.0          0           0
 I isoleucine          2.9          2           1
 K lysine              0.0          0           0
 L leucine            10.0          7           1
 M methionine          1.4          1           1
 N asparagine          0.0          0           0
 P proline            11.4          8           2
 Q glutamine           4.3          3           1
 R arginine            1.4          1           1
 S serine             10.0          7           1
 T threonine           7.1          5           2
 V valine              4.3          3           1
 W tryptophan          4.3          3           1
 Y tyrosine            2.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger RNA binding protein 2 isoform 2 
ZFR2                  0.162   zinc finger RNA binding protein 2 isoform 1 
FOXF2                 0.038   forkhead box F2 
MYCL1                 0.023   l-myc-1 proto-oncogene isoform 2 
MYCL1                 0.023   l-myc-1 proto-oncogene isoform 1 
MYCL1                 0.023   l-myc-1 proto-oncogene isoform 1 
VCAN                  0.023   versican isoform 1 
LOC100293235          0.023   PREDICTED: hypothetical protein 
LOC100291469          0.023   PREDICTED: hypothetical protein XP_002346693 
NACA                  0.015   nascent polypeptide-associated complex alpha subuni...
MEGF10                0.015   multiple EGF-like-domains 10 
LIX1L                 0.015   Lix1 homolog (mouse) like 
FAM181B               0.015   hypothetical protein LOC220382 
SPSB3                 0.015   splA/ryanodine receptor domain and SOCS box containi...
LOC100288901          0.008   PREDICTED: hypothetical protein XP_002342617 
FBXO46                0.008   F-box protein 46 
PLXNB1                0.008   plexin B1 
PLXNB1                0.008   plexin B1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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