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Search of human proteins with 12751497
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12751497 hypothetical protein LOC65265 [Homo sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12751497 hypothetical protein LOC65265 [Homo sapiens] 462 e-130
gi|153070260 myristoylated alanine-rich protein kinase C substra... 37 0.014
gi|55956910 meningioma 1 [Homo sapiens] 37 0.014
gi|211064487 hypothetical protein LOC84886 isoform 3 [Homo sapiens] 35 0.041
gi|211063485 hypothetical protein LOC84886 isoform 2 [Homo sapiens] 35 0.041
gi|14249478 hypothetical protein LOC84886 isoform 1 [Homo sapiens] 35 0.041
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 33 0.16
gi|13129104 coiled-coil domain containing 86 [Homo sapiens] 33 0.16
gi|4758816 N-myristoyltransferase 2 [Homo sapiens] 33 0.20
gi|207113199 erythrocyte membrane protein band 4.1-like 2 isofor... 33 0.26
gi|207113195 erythrocyte membrane protein band 4.1-like 2 isofor... 33 0.26
gi|4503579 erythrocyte membrane protein band 4.1-like 2 isoform ... 33 0.26
gi|93277096 limbin [Homo sapiens] 33 0.26
gi|50962882 G patch domain containing 8 [Homo sapiens] 33 0.26
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 32 0.35
gi|239752069 PREDICTED: hypothetical protein [Homo sapiens] 32 0.35
gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo ... 32 0.35
gi|56090548 insulin-like growth factor binding protein-like 1 [H... 32 0.35
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 32 0.35
gi|169164474 PREDICTED: hypothetical protein [Homo sapiens] 32 0.45
gi|239747958 PREDICTED: hypothetical protein isoform 4 [Homo sap... 32 0.45
gi|239741853 PREDICTED: hypothetical protein isoform 2 [Homo sap... 32 0.45
gi|86990441 MAP/microtubule affinity-regulating kinase 2 isoform... 32 0.59
gi|116256487 patatin-like phospholipase domain containing 6 [Hom... 32 0.59
gi|254028234 MAP/microtubule affinity-regulating kinase 2 isofor... 31 0.77
gi|21735548 centrosomal protein 2 [Homo sapiens] 31 0.77
gi|61743978 stabilin 1 precursor [Homo sapiens] 31 0.77
gi|41350212 bromodomain containing 7 [Homo sapiens] 31 0.77
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens] 31 0.77
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 31 0.77
>gi|12751497 hypothetical protein LOC65265 [Homo sapiens]
Length = 229
Score = 462 bits (1188), Expect = e-130
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MAALGHLAGEAAAAPGPGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPL 60
MAALGHLAGEAAAAPGPGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPL
Sbjct: 1 MAALGHLAGEAAAAPGPGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPL 60
Query: 61 GDEGGTASKKQKNKKKTRNRASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQ 120
GDEGGTASKKQKNKKKTRNRASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQ
Sbjct: 61 GDEGGTASKKQKNKKKTRNRASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQ 120
Query: 121 LELGLKRQKPTPKQKEQAIGAIRTLRSKRTPLPRKRQLMHSLFGDYRAQMEAEWREALRA 180
LELGLKRQKPTPKQKEQAIGAIRTLRSKRTPLPRKRQLMHSLFGDYRAQMEAEWREALRA
Sbjct: 121 LELGLKRQKPTPKQKEQAIGAIRTLRSKRTPLPRKRQLMHSLFGDYRAQMEAEWREALRA 180
Query: 181 LRAAAYSAQVQPVDGATRKKSQRVCRPRSIWRAKATLDMPDEEFRFNFF 229
LRAAAYSAQVQPVDGATRKKSQRVCRPRSIWRAKATLDMPDEEFRFNFF
Sbjct: 181 LRAAAYSAQVQPVDGATRKKSQRVCRPRSIWRAKATLDMPDEEFRFNFF 229
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 37.0 bits (84), Expect = 0.014
Identities = 32/116 (27%), Positives = 43/116 (37%), Gaps = 22/116 (18%)
Query: 2 AALGHLAGEAAAAPGPGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLG 61
A G +GE AAAPG GA P + P + PE+P P
Sbjct: 205 AEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEA--KPQEAAVAPEKP----------PAS 252
Query: 62 DEGGTASKKQKNKKKTRNRA----------SVANGGEKASEKLAPEEVPLSAEAQA 107
DE A + K ++K A S A G ++ AP E P +A A +
Sbjct: 253 DETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASS 308
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 37.0 bits (84), Expect = 0.014
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 9/129 (6%)
Query: 9 GEAAAAPGPGTPC--ASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLGDEGGT 66
G A APGPG P +S G++ GP + L P S + + P+ GG
Sbjct: 882 GTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGR 941
Query: 67 ASKKQKNKKKTRNRASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGLK 126
++K R+ V+ G AP+ + QQ A A V G
Sbjct: 942 GRGRRK-----RDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAA--VGGSSAGET 994
Query: 127 RQKPTPKQK 135
R PTP +K
Sbjct: 995 RGAPTPHEK 1003
>gi|211064487 hypothetical protein LOC84886 isoform 3 [Homo sapiens]
Length = 197
Score = 35.4 bits (80), Expect = 0.041
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 20/134 (14%)
Query: 20 PCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLGDEGGTASKKQKNKKKTRN 79
P A P P+S A S Q S+ SR+ L G T +++ + K
Sbjct: 13 PSNGTAASEPRPLSKASQGS-------QALKSSQGSRSSSLDALGPTRKEEEASFWKINA 65
Query: 80 RASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGLKRQKPTPKQKEQAI 139
S G E + L P ++ + + + L C RQ+P PK +E +
Sbjct: 66 ERSRGEGPEAEFQSLTPSQIKSMEKGE-----KVLPPCY--------RQEPAPKDREAKV 112
Query: 140 GAIRTLRSKRTPLP 153
TLR ++ PLP
Sbjct: 113 ERPSTLRQEQRPLP 126
>gi|211063485 hypothetical protein LOC84886 isoform 2 [Homo sapiens]
Length = 289
Score = 35.4 bits (80), Expect = 0.041
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 20/134 (14%)
Query: 20 PCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLGDEGGTASKKQKNKKKTRN 79
P A P P+S A S Q S+ SR+ L G T +++ + K
Sbjct: 105 PSNGTAASEPRPLSKASQGS-------QALKSSQGSRSSSLDALGPTRKEEEASFWKINA 157
Query: 80 RASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGLKRQKPTPKQKEQAI 139
S G E + L P ++ + + + L C RQ+P PK +E +
Sbjct: 158 ERSRGEGPEAEFQSLTPSQIKSMEKGE-----KVLPPCY--------RQEPAPKDREAKV 204
Query: 140 GAIRTLRSKRTPLP 153
TLR ++ PLP
Sbjct: 205 ERPSTLRQEQRPLP 218
>gi|14249478 hypothetical protein LOC84886 isoform 1 [Homo sapiens]
Length = 327
Score = 35.4 bits (80), Expect = 0.041
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 20/134 (14%)
Query: 20 PCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLGDEGGTASKKQKNKKKTRN 79
P A P P+S A S Q S+ SR+ L G T +++ + K
Sbjct: 143 PSNGTAASEPRPLSKASQGS-------QALKSSQGSRSSSLDALGPTRKEEEASFWKINA 195
Query: 80 RASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGLKRQKPTPKQKEQAI 139
S G E + L P ++ + + + L C RQ+P PK +E +
Sbjct: 196 ERSRGEGPEAEFQSLTPSQIKSMEKGE-----KVLPPCY--------RQEPAPKDREAKV 242
Query: 140 GAIRTLRSKRTPLP 153
TLR ++ PLP
Sbjct: 243 ERPSTLRQEQRPLP 256
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 33.5 bits (75), Expect = 0.16
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 16/100 (16%)
Query: 66 TASKKQKNKKKTRNRASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGL 125
T +K+K KKK R R S ++ + +K + ++ S ++
Sbjct: 184 TPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKR---------------- 227
Query: 126 KRQKPTPKQKEQAIGAIRTLRSKRTPLPRKRQLMHSLFGD 165
K + PTPK K ++ R TP P+ R+ S D
Sbjct: 228 KHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSAD 267
>gi|13129104 coiled-coil domain containing 86 [Homo sapiens]
Length = 360
Score = 33.5 bits (75), Expect = 0.16
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 15 PGPGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLGD--EGGTASKKQK 72
P PG+P G + PGP S P P + S+ P G+ GG +KK+K
Sbjct: 156 PVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRK 215
Query: 73 NKKKTRNRASVANGGEKASEKLAPEEVPL 101
++ AS+KL EE+P+
Sbjct: 216 G----------SSSQAPASKKLNKEELPV 234
>gi|4758816 N-myristoyltransferase 2 [Homo sapiens]
Length = 498
Score = 33.1 bits (74), Expect = 0.20
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 46 EQPTCS----NADSRAHPLGDEGGTASKKQKNKKKTRNRASVANGGEKASEKLAPEEVPL 101
+Q TC N + H G GG K+K KK+ R + +GG K+ +E+ +
Sbjct: 18 DQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKI 77
>gi|207113199 erythrocyte membrane protein band 4.1-like 2 isoform b
[Homo sapiens]
Length = 673
Score = 32.7 bits (73), Expect = 0.26
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 74 KKKTRNRASVANGGEK-------ASEKLAPEEVPLSAEA-QAQQLAQELAWCVEQLELGL 125
K+K+ +GG+K E++ +E PL E QA+ A+E+A +++++ +
Sbjct: 84 KQKSYTLVVAKDGGDKKEPTQAVVEEQVLDKEEPLPEEQRQAKGDAEEMAQKKQEIKVEV 143
Query: 126 KRQKPTPKQKEQAIGAIRTLRSKRTPLPRKRQLMHSLFGDYRAQMEAEWREALRALRAAA 185
K +KP+ ++E+ ++ + + T L K + +++ + L A
Sbjct: 144 KEEKPSVSKEEKP--SVSKVEMQPTELVSKER---------EEKVKETQEDKLEGGAAKR 192
Query: 186 YSAQVQPVDGATRKKSQRVCRPRSIWRAKATL 217
+ +VQ + K SQ+V + + K TL
Sbjct: 193 ETKEVQTNELKAEKASQKVTKKTKTVQCKVTL 224
>gi|207113195 erythrocyte membrane protein band 4.1-like 2 isoform b
[Homo sapiens]
Length = 673
Score = 32.7 bits (73), Expect = 0.26
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 74 KKKTRNRASVANGGEK-------ASEKLAPEEVPLSAEA-QAQQLAQELAWCVEQLELGL 125
K+K+ +GG+K E++ +E PL E QA+ A+E+A +++++ +
Sbjct: 84 KQKSYTLVVAKDGGDKKEPTQAVVEEQVLDKEEPLPEEQRQAKGDAEEMAQKKQEIKVEV 143
Query: 126 KRQKPTPKQKEQAIGAIRTLRSKRTPLPRKRQLMHSLFGDYRAQMEAEWREALRALRAAA 185
K +KP+ ++E+ ++ + + T L K + +++ + L A
Sbjct: 144 KEEKPSVSKEEKP--SVSKVEMQPTELVSKER---------EEKVKETQEDKLEGGAAKR 192
Query: 186 YSAQVQPVDGATRKKSQRVCRPRSIWRAKATL 217
+ +VQ + K SQ+V + + K TL
Sbjct: 193 ETKEVQTNELKAEKASQKVTKKTKTVQCKVTL 224
>gi|4503579 erythrocyte membrane protein band 4.1-like 2 isoform a
[Homo sapiens]
Length = 1005
Score = 32.7 bits (73), Expect = 0.26
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 74 KKKTRNRASVANGGEK-------ASEKLAPEEVPLSAEA-QAQQLAQELAWCVEQLELGL 125
K+K+ +GG+K E++ +E PL E QA+ A+E+A +++++ +
Sbjct: 84 KQKSYTLVVAKDGGDKKEPTQAVVEEQVLDKEEPLPEEQRQAKGDAEEMAQKKQEIKVEV 143
Query: 126 KRQKPTPKQKEQAIGAIRTLRSKRTPLPRKRQLMHSLFGDYRAQMEAEWREALRALRAAA 185
K +KP+ ++E+ ++ + + T L K + +++ + L A
Sbjct: 144 KEEKPSVSKEEKP--SVSKVEMQPTELVSKER---------EEKVKETQEDKLEGGAAKR 192
Query: 186 YSAQVQPVDGATRKKSQRVCRPRSIWRAKATL 217
+ +VQ + K SQ+V + + K TL
Sbjct: 193 ETKEVQTNELKAEKASQKVTKKTKTVQCKVTL 224
>gi|93277096 limbin [Homo sapiens]
Length = 1308
Score = 32.7 bits (73), Expect = 0.26
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 11/129 (8%)
Query: 88 EKASEKLAPEEVPLSAEAQAQQLAQELAWCV-------EQLELGLKRQKPTPKQKEQAIG 140
++ KL + V A Q Q LA W E E+ +RQ T QA+
Sbjct: 1022 QELERKLEDQLVQQEAAQQQQALASWQQWVADGPGILNEPGEVDSERQVSTVLH--QALS 1079
Query: 141 AIRTLRSKRTPLPRKRQLMHSLFGDYRAQMEAEWREAL--RALRAAAYSAQVQPVDGATR 198
+TL + R+ Q + D MEA+ L + LR A+Y A++ V GAT
Sbjct: 1080 KSQTLLEQHQQCLREEQQNSVVLEDLLENMEADTFATLCSQELRLASYLARMAMVPGATL 1139
Query: 199 KKSQRVCRP 207
++ V P
Sbjct: 1140 RRLLSVVLP 1148
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 32.7 bits (73), Expect = 0.26
Identities = 20/86 (23%), Positives = 35/86 (40%)
Query: 8 AGEAAAAPGPGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLGDEGGTA 67
+G AP G+ C+ + PG + T P + S R ++
Sbjct: 626 SGGRMDAPASGSACSGLNKQEPGGSHGSETEDTGRSLPSKKERSGKSHRHKKKKKHKKSS 685
Query: 68 SKKQKNKKKTRNRASVANGGEKASEK 93
K+K+K T ++S A GEK+ ++
Sbjct: 686 KHKRKHKADTEEKSSKAESGEKSKKR 711
Score = 28.1 bits (61), Expect = 6.5
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 53 ADSRAHPLGDEGGTASKKQKNKKKTRNRASVANGGEKASEKLAP---EEVPLSAEAQAQQ 109
AD+ E G SKK+K +K+ +N++S E+ + P P +AQ
Sbjct: 693 ADTEEKSSKAESGEKSKKRKKRKRKKNKSSAPADSERGPKPEPPGSGSPAPPRRRRRAQD 752
Query: 110 LAQELAWCVEQLELGLK 126
+Q + E+ G K
Sbjct: 753 DSQRRSLPAEEGSSGKK 769
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 32.3 bits (72), Expect = 0.35
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 88 EKASEKLAPEEVPLS---AEAQAQ--QLAQELAWCVEQLELGLKRQKPTPKQKEQAIGAI 142
EK KL + LS AE QAQ +L +LA E+L+ L R + QK A+ I
Sbjct: 1047 EKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMALKKI 1106
Query: 143 RTLRSKRTPL 152
R L S+ + L
Sbjct: 1107 RELESQISEL 1116
>gi|239752069 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 32.3 bits (72), Expect = 0.35
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 9/148 (6%)
Query: 9 GEAAAAPGPGTPCASRGARLPGPVSSARNPSTVCLC---PEQPTCSNADSRAHPLGDEGG 65
G A + ASR + PG +++ R + LC P +P + A + A G
Sbjct: 49 GAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRAR 108
Query: 66 TASKKQKNKKKTRNRASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGL 125
+++ + + G + + +L P + + LA C G
Sbjct: 109 SSACSRLPLPRKLTEPERGGGAQSQASQLIR---PTPLGTRERPLAAPPGNCARSRREGP 165
Query: 126 KRQKPTPKQKEQAIGAIRTLRSKRTPLP 153
R PT +A+GA T R+ P P
Sbjct: 166 SRPAPT---GARALGAACTPRAPSAPRP 190
>gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo
sapiens]
Length = 216
Score = 32.3 bits (72), Expect = 0.35
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 9/148 (6%)
Query: 9 GEAAAAPGPGTPCASRGARLPGPVSSARNPSTVCLC---PEQPTCSNADSRAHPLGDEGG 65
G A + ASR + PG +++ R + LC P +P + A + A G
Sbjct: 49 GAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRAR 108
Query: 66 TASKKQKNKKKTRNRASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGL 125
+++ + + G + + +L P + + LA C G
Sbjct: 109 SSACSRLPLPRKLTEPERGGGAQSQASQLIR---PTPLGTRERPLAAPPGNCARSRREGP 165
Query: 126 KRQKPTPKQKEQAIGAIRTLRSKRTPLP 153
R PT +A+GA T R+ P P
Sbjct: 166 SRPAPT---GARALGAACTPRAPSAPRP 190
>gi|56090548 insulin-like growth factor binding protein-like 1 [Homo
sapiens]
Length = 278
Score = 32.3 bits (72), Expect = 0.35
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 9 GEAAAAPGPGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHP 59
G A GPG CAS+ A +A + +C+C ++ T +D R++P
Sbjct: 79 GRAGGRCGPGLVCASQAA------GAAPEGTGLCVCAQRGTVCGSDGRSYP 123
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 32.3 bits (72), Expect = 0.35
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 9 GEAAAAPGPGTPCASRGARLPG--------PVSSARNPSTVCLCPEQPTC 50
GEAAAA G G A+ GA PG P +++ P+ + PEQ C
Sbjct: 44 GEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVAC 93
>gi|169164474 PREDICTED: hypothetical protein [Homo sapiens]
Length = 259
Score = 32.0 bits (71), Expect = 0.45
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 171 EAEWREALRALRAAAYSAQVQPVDGATRKKSQRVCRPRSIWRAKATLDMP 220
E + R +R L + +A + GAT + +R C PR +W + +L +P
Sbjct: 129 ERQARPLVRELGRGSAAAGCPSLPGATTPRPRRCCVPRDLWGGRESLRVP 178
>gi|239747958 PREDICTED: hypothetical protein isoform 4 [Homo
sapiens]
Length = 259
Score = 32.0 bits (71), Expect = 0.45
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 171 EAEWREALRALRAAAYSAQVQPVDGATRKKSQRVCRPRSIWRAKATLDMP 220
E + R +R L + +A + GAT + +R C PR +W + +L +P
Sbjct: 129 ERQARPLVRELGRGSAAAGCPSLPGATTPRPRRCCVPRDLWGGRESLRVP 178
>gi|239741853 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 259
Score = 32.0 bits (71), Expect = 0.45
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 171 EAEWREALRALRAAAYSAQVQPVDGATRKKSQRVCRPRSIWRAKATLDMP 220
E + R +R L + +A + GAT + +R C PR +W + +L +P
Sbjct: 129 ERQARPLVRELGRGSAAAGCPSLPGATTPRPRRCCVPRDLWGGRESLRVP 178
>gi|86990441 MAP/microtubule affinity-regulating kinase 2 isoform a
[Homo sapiens]
Length = 745
Score = 31.6 bits (70), Expect = 0.59
Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 3/164 (1%)
Query: 28 LPGPVSSARNPSTVCLCPEQP---TCSNADSRAHPLGDEGGTASKKQKNKKKTRNRASVA 84
L G SS T+ L P T S+A S +H + K+++ + +
Sbjct: 327 LLGYKSSELEGDTITLKPRPSADLTNSSAPSPSHKVQRSVSANPKQRRFSDQAGPAIPTS 386
Query: 85 NGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGLKRQKPTPKQKEQAIGAIRT 144
N K ++ E + ++ + A A GL+R+K TP ++ + T
Sbjct: 387 NSYSKKTQSNNAENKRPEEDRESGRKASSTAKVPASPLPGLERKKTTPTPSTNSVLSTST 446
Query: 145 LRSKRTPLPRKRQLMHSLFGDYRAQMEAEWREALRALRAAAYSA 188
RS+ +PL + L + + + + A A +AA SA
Sbjct: 447 NRSRNSPLLERASLGQASIQNGKDSLTMPGSRASTASASAAVSA 490
>gi|116256487 patatin-like phospholipase domain containing 6 [Homo
sapiens]
Length = 1327
Score = 31.6 bits (70), Expect = 0.59
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 17 PGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPL-GDEGGTASKKQKNKK 75
PG P GA LPGP P+++ P P S S + G +GG S +
Sbjct: 335 PGRPPDPTGAPLPGPTGDPVKPTSL-ETPSAPLLSRCVSMPGDISGLQGGPRSDFDMAYE 393
Query: 76 KTRNRASV---ANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELG 124
+ R S+ A+GG A AP P + A E ++C ++ G
Sbjct: 394 RGRISVSLQEEASGGSLA----APARTPTQEPREQPAGACEYSYCEDESATG 441
>gi|254028234 MAP/microtubule affinity-regulating kinase 2 isoform d
[Homo sapiens]
Length = 788
Score = 31.2 bits (69), Expect = 0.77
Identities = 41/162 (25%), Positives = 60/162 (37%), Gaps = 29/162 (17%)
Query: 33 SSARNPS-----TVCLCPEQPTCSNADSRAHPLGDEGGTASKK-QKNKKKTRNRASVANG 86
SSA +PS +V P+Q S D A P + SKK Q N + +
Sbjct: 386 SSAPSPSHKVQRSVSANPKQRRFS--DQAAGPAIPTSNSYSKKTQSNNAENKRPEEDRES 443
Query: 87 GEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGLKRQKPTPKQKEQAIGAIRTLR 146
G KAS PL GL+R+K TP ++ + T R
Sbjct: 444 GRKASSTAKVPASPLP---------------------GLERKKTTPTPSTNSVLSTSTNR 482
Query: 147 SKRTPLPRKRQLMHSLFGDYRAQMEAEWREALRALRAAAYSA 188
S+ +PL + L + + + + A A +AA SA
Sbjct: 483 SRNSPLLERASLGQASIQNGKDSLTMPGSRASTASASAAVSA 524
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 31.2 bits (69), Expect = 0.77
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 88 EKASEKLAPEEVPLSAEAQAQQLAQ-----------ELAWCVEQLELGLK-RQKPTPKQK 135
++A LA + L A Q QQ AQ L +EQ + LK R K
Sbjct: 1806 DEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHK 1865
Query: 136 EQAIGAIRTLRSKRTPLPRKRQLMHSLFGDYRAQMEAEWREALRALRAAAYSAQVQPVD 194
EQA R L + R+ Q + + GD RA+ + + L + A AQ V+
Sbjct: 1866 EQA----RRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQEHEVE 1920
>gi|61743978 stabilin 1 precursor [Homo sapiens]
Length = 2570
Score = 31.2 bits (69), Expect = 0.77
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 5 GHLAGEAAAAPG-PGTPCASRGARLPGPVSSARNPSTVCLC 44
GH E A PG P +PC+ RG + G S + CLC
Sbjct: 1962 GHYGSECQACPGGPSSPCSDRGVCMDGMSGSGQ-----CLC 1997
>gi|41350212 bromodomain containing 7 [Homo sapiens]
Length = 651
Score = 31.2 bits (69), Expect = 0.77
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 61 GDEGGTASKKQKNKKKTRNRASVANGGEKASEKLA------PEEVPLSAEAQAQQLAQE- 113
G+E G ++ K KK R+R V N EK + A P E PL++ Q+ ++
Sbjct: 75 GEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQEEVEQT 134
Query: 114 -LAWCVEQLELGLKRQKPT 131
L + QL L+R+ P+
Sbjct: 135 PLQEALNQLMRQLQRKDPS 153
>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
Length = 1321
Score = 31.2 bits (69), Expect = 0.77
Identities = 40/172 (23%), Positives = 56/172 (32%), Gaps = 15/172 (8%)
Query: 15 PGPGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLGDEGGTASKKQKNK 74
P PG R A G S A C PT + D GDEG S +
Sbjct: 328 PAPGVRTVYRFANRTGFPSPAERFDAYCFRAHHPTSQHGDLETPSSGDEGEILSAEGPPV 387
Query: 75 KKTRN------------RASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLE 122
++ + + + GE+ E L EE S + + + E
Sbjct: 388 RELEPTLEEEEVVTPDFQEPLVSSGEE--ETLILEEKQESQQTLSPTPGDPMLASWPTGE 445
Query: 123 LGLKRQKPTPKQKEQAIGA-IRTLRSKRTPLPRKRQLMHSLFGDYRAQMEAE 173
+ L P+P A T + P+PR+R L G Y Q E E
Sbjct: 446 VWLSTVAPSPSDMGAGTAASSHTEVAPTDPMPRRRGRFKGLNGRYFQQQEPE 497
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 31.2 bits (69), Expect = 0.77
Identities = 34/134 (25%), Positives = 49/134 (36%), Gaps = 12/134 (8%)
Query: 15 PGPGTPCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLGDEGGTASKKQKNK 74
P G P R +P P+SS P + P P + + A P +E +K K
Sbjct: 87 PPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPPVTAPGTPALPPTEEIWVENKTPDGK 146
Query: 75 -----KKTRNRASVANGGEKASEK-------LAPEEVPLSAEAQAQQLAQELAWCVEQLE 122
+TR A G K ++ A +V A+AQAQ AQ A Q +
Sbjct: 147 VYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQ 206
Query: 123 LGLKRQKPTPKQKE 136
+ Q Q +
Sbjct: 207 AQAQAQAQAQAQAQ 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.127 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,931,744
Number of Sequences: 37866
Number of extensions: 487646
Number of successful extensions: 3552
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 3409
Number of HSP's gapped (non-prelim): 339
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.