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Search of human proteins with 4504779
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4504779 integrin, beta 8 precursor [Homo sapiens]
(769 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4504779 integrin, beta 8 precursor [Homo sapiens] 1620 0.0
gi|9625002 integrin, beta 6 [Homo sapiens] 540 e-153
gi|20127446 integrin, beta 5 [Homo sapiens] 508 e-144
gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens] 503 e-142
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 474 e-133
gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens] 474 e-133
gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens] 474 e-133
gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens] 474 e-133
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 474 e-133
gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens] 474 e-133
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 432 e-121
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 432 e-121
gi|4504777 integrin, beta 7 [Homo sapiens] 403 e-112
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 323 5e-88
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 323 5e-88
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 323 5e-88
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 120 6e-27
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 80 9e-15
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 78 4e-14
gi|157384973 tenascin R [Homo sapiens] 74 4e-13
gi|153946395 tenascin C precursor [Homo sapiens] 74 7e-13
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 72 2e-12
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 71 3e-12
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 71 3e-12
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 71 3e-12
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 67 5e-11
gi|62988324 tenascin N [Homo sapiens] 67 5e-11
gi|33598931 scavenger receptor class F, member 1 isoform 3 precu... 65 2e-10
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 65 2e-10
gi|145309306 scavenger receptor class F, member 1 isoform 5 prec... 65 2e-10
>gi|4504779 integrin, beta 8 precursor [Homo sapiens]
Length = 769
Score = 1620 bits (4195), Expect = 0.0
Identities = 769/769 (100%), Positives = 769/769 (100%)
Query: 1 MCGSALAFFTAAFVCLQNDRRGPASFLWAAWVFSLVLGLGQGEDNRCASSNAASCARCLA 60
MCGSALAFFTAAFVCLQNDRRGPASFLWAAWVFSLVLGLGQGEDNRCASSNAASCARCLA
Sbjct: 1 MCGSALAFFTAAFVCLQNDRRGPASFLWAAWVFSLVLGLGQGEDNRCASSNAASCARCLA 60
Query: 61 LGPECGWCVQEDFISGGSRSERCDIVSNLISKGCSVDSIEYPSVHVIIPTENEINTQVTP 120
LGPECGWCVQEDFISGGSRSERCDIVSNLISKGCSVDSIEYPSVHVIIPTENEINTQVTP
Sbjct: 61 LGPECGWCVQEDFISGGSRSERCDIVSNLISKGCSVDSIEYPSVHVIIPTENEINTQVTP 120
Query: 121 GEVSIQLRPGAEANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFF 180
GEVSIQLRPGAEANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFF
Sbjct: 121 GEVSIQLRPGAEANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFF 180
Query: 181 SRDFRLGFGSYVDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKA 240
SRDFRLGFGSYVDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKA
Sbjct: 181 SRDFRLGFGSYVDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKA 240
Query: 241 VHRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIV 300
VHRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIV
Sbjct: 241 VHRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIV 300
Query: 301 VPNDGNCHLKNNVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPG 360
VPNDGNCHLKNNVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPG
Sbjct: 301 VPNDGNCHLKNNVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPG 360
Query: 361 TIAGEIESKAANLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCR 420
TIAGEIESKAANLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCR
Sbjct: 361 TIAGEIESKAANLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCR 420
Query: 421 NVTSNDEVLFNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKGK 480
NVTSNDEVLFNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKGK
Sbjct: 421 NVTSNDEVLFNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKGK 480
Query: 481 CVDETFLDSKCFQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGK 540
CVDETFLDSKCFQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGK
Sbjct: 481 CVDETFLDSKCFQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGK 540
Query: 541 VYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQV 600
VYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQV
Sbjct: 541 VYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQV 600
Query: 601 CSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQAILDQCKTS 660
CSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQAILDQCKTS
Sbjct: 601 CSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQAILDQCKTS 660
Query: 661 CALMEQQHYVDQTSECFSSPSYLRIFFIIFIVTFLIGLLKVLIIRQVILQWNSNKIKSSS 720
CALMEQQHYVDQTSECFSSPSYLRIFFIIFIVTFLIGLLKVLIIRQVILQWNSNKIKSSS
Sbjct: 661 CALMEQQHYVDQTSECFSSPSYLRIFFIIFIVTFLIGLLKVLIIRQVILQWNSNKIKSSS 720
Query: 721 DYRVSASKKDKLILQSVCTRAVTYRREKPEEIKMDISKLNAHETFRCNF 769
DYRVSASKKDKLILQSVCTRAVTYRREKPEEIKMDISKLNAHETFRCNF
Sbjct: 721 DYRVSASKKDKLILQSVCTRAVTYRREKPEEIKMDISKLNAHETFRCNF 769
>gi|9625002 integrin, beta 6 [Homo sapiens]
Length = 788
Score = 540 bits (1390), Expect = e-153
Identities = 270/691 (39%), Positives = 392/691 (56%), Gaps = 42/691 (6%)
Query: 32 VFSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGSRSERCDIVSNLIS 91
+F L LG CA A +C CL +GP+C WC QE+F ERCD +NL++
Sbjct: 8 LFFLFLGRNDHVQGGCALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCDTPANLLA 67
Query: 92 KGCSVDSIEYPSVHVIIPTENEINT----------QVTPGEVSIQLRPGAEANFMLKVHP 141
KGC ++ IE P V I ++ Q+ P + ++LRPG + V
Sbjct: 68 KGCQLNFIENPVSQVEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQ 127
Query: 142 LKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYIS 201
+ YPVDLYYL+D+SASM +++ + +G+ LS++M+ + +FRLGFGS+V+K VSP++
Sbjct: 128 TEDYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVK 187
Query: 202 IHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAML 261
PE I N CS C+P G+ H+L LT + F + V QKIS NIDTPEGGFDA++
Sbjct: 188 TTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIM 247
Query: 262 QAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHL-KNNVYVKSTTM 320
QAAVC+ IGWR ++ LL+ ++D SH +DSKLAGIV+PNDG CHL N Y ST +
Sbjct: 248 QAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVL 307
Query: 321 EHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEA 380
E+P++GQL +KL+ NN+ +IFAV +Q H Y++ L+PG G ++ + N+ L++ A
Sbjct: 308 EYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISA 367
Query: 381 YQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCRNVTSNDEVLFNVTVTMKKCD 440
Y++L SEV+++V +G+ + TAIC +G+ + C ++ D F+VTV + C+
Sbjct: 368 YEELRSEVELEVLGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVTVNIPHCE 427
Query: 441 VTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKGKCVDETFLDSKC------FQC 494
+ IIKP+G + ++ + C+C C+ + SKC FQC
Sbjct: 428 --RRSRHIIIKPVGLGDALELLVSPECNCDCQK---------EVEVNSSKCHHGNGSFQC 476
Query: 495 DENKCH---------FDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKY 545
CH ED S++SCK D P CSGRG C CG+C CH G +YG Y
Sbjct: 477 GVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPY 536
Query: 546 CEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRG 605
C+ D+FSC H G LC G+G+C+ G C C SGW G+ C C + + CV+ G +CSGRG
Sbjct: 537 CQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNC-TTSTDSCVSEDGVLCSGRG 595
Query: 606 TCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQA---ILDQCKTSCA 662
CVCG+C CT+P + G CE CPTC C +C++C H QA +D+CK + A
Sbjct: 596 DCVCGKCVCTNPGASGPTCERCPTCGDPCNSKRSCIEC-HLSAAGQAREECVDKCKLAGA 654
Query: 663 LMEQQHYVDQTSECFSSPSYLRIFFIIFIVT 693
+ ++ + S I F++T
Sbjct: 655 TISEEEDFSKDGSVSCSLQGENECLITFLIT 685
>gi|20127446 integrin, beta 5 [Homo sapiens]
Length = 799
Score = 508 bits (1308), Expect = e-144
Identities = 251/627 (40%), Positives = 373/627 (59%), Gaps = 26/627 (4%)
Query: 45 NRCASSNAASCARCLALGPECGWCVQEDFISGGSRSERCDIVSNLISKGCSVDSIEYP-- 102
N C S +A SC CL + P+C WC +EDF S S + RCD+ +NL+ GC + IE P
Sbjct: 26 NICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSITSRCDLRANLVKNGCGGE-IESPAS 84
Query: 103 SVHVI--IPTENEIN-------TQVTPGEVSIQLRPGAEANFMLKVHPLKKYPVDLYYLV 153
S HV+ +P ++ + Q+TP E+++ LRPG + F L+V ++ YPVDLYYL+
Sbjct: 85 SFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYPVDLYYLM 144
Query: 154 DVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYISIHPERIHNQCSD 213
D+S SM ++++ + S+G L+ +M + +FRLGFGS+VDK +SP+ P N C
Sbjct: 145 DLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQTNPCIG 204
Query: 214 YNL--DCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIG 271
Y L +C+P G+ H+L LT+ + F + V +Q++S N D PEGGFDA+LQAAVC+ IG
Sbjct: 205 YKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIG 264
Query: 272 WRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKN-NVYVKSTTMEHPSLGQLSE 330
WRK+A LL+ TD H+ALD KL G+V P+DG CHL N Y S M++PSL L E
Sbjct: 265 WRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGE 324
Query: 331 KLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEAYQKLISEVKV 390
KL +NNIN+IFAV + YK+ L+PGT ++ + N+ L++ AY + S+V++
Sbjct: 325 KLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSIRSKVEL 384
Query: 391 QVENQVQGIYFNITAICPDGSRKPGMEGCRNVTSNDEVLFNVTVTMKKCDVTGGKNYAII 450
V +Q + + TA C DG PG C + D F V++ + C ++ +
Sbjct: 385 SVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHTEHVFAL 444
Query: 451 KPIGFNETAKIHIHRNCSCQCEDNRGP-KGKCVDE-TFLDSKCFQCDEN------KCHFD 502
+P+GF ++ ++ + NC+C C P +C T++ C +C +C
Sbjct: 445 RPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLC-ECSPGYLGTRCECQDG 503
Query: 503 EDQFSSES-CKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLC 561
E+Q ++ C+ + +P+CSGRG C C +CSC + + GK+YG +CE D+FSC + G LC
Sbjct: 504 ENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLC 563
Query: 562 AGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIG 621
+GHGEC G C+C +G+ GD C C S C GQ+CS RG C+CG+C+CT+P + G
Sbjct: 564 SGHGECHCGECKCHAGYIGDNCNC-STDISTCRGRDGQICSERGHCLCGQCQCTEPGAFG 622
Query: 622 RFCEHCPTCYTACKENWNCMQCLHPHN 648
CE CPTC AC +C++CL H+
Sbjct: 623 EMCEKCPTCPDACSTKRDCVECLLLHS 649
>gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens]
Length = 788
Score = 503 bits (1295), Expect = e-142
Identities = 265/741 (35%), Positives = 400/741 (53%), Gaps = 64/741 (8%)
Query: 27 LWAAWV-FSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGSRSERCDI 85
LWA + + G+G G N C + +SC +CLA+ P C WC E G S RCD+
Sbjct: 10 LWATVLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLG---SPRCDL 66
Query: 86 VSNLISKGCSVDSIEYPSVHVIIPTENEIN----------TQVTPGEVSIQLRPGAEANF 135
NL+ C+ +SIE+P + + ++ TQV+P ++++LRP NF
Sbjct: 67 KENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNF 126
Query: 136 MLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKT 195
++V ++ YPVD+YYL+D+S SM +++ + ++G L+ +M + + R+GFG++VDK
Sbjct: 127 SIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKP 186
Query: 196 VSPYISIHP-ERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPE 254
VSPY+ I P E + N C D C+P GY HVL+LT+ +T F + V +Q +S N D PE
Sbjct: 187 VSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPE 246
Query: 255 GGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHL-KNNV 313
GGFDA++QA VC+ IGWR +A LL+ TD +H+ALD +LAGIV PNDG CH+ +N
Sbjct: 247 GGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNH 306
Query: 314 YVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAANL 373
Y STTM++PSLG ++EKL NIN+IFAV + Y++ L+PGT G + ++N+
Sbjct: 307 YSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNV 366
Query: 374 NNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCRNVTSNDEVLFNVT 433
L+V+AY K+ S+V+++V + + + + A C + PG++ C + D V F++
Sbjct: 367 LQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIE 426
Query: 434 VTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKGKCVDETFLDSKCFQ 493
++ C K++ IKP+GF ++ + + +C C C+ P + +C
Sbjct: 427 AKVRGCPQEKEKSFT-IKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGV 485
Query: 494 CD------ENKCHFDEDQF---SSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGK 544
C ++C E+ + + C + QPVCS RG C+CG+C CH GK+ GK
Sbjct: 486 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGK 545
Query: 545 YCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGR 604
YCE DDFSC + G +C+GHG+C G C C S W G C C + C++S G +CSGR
Sbjct: 546 YCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNC-TTRTDTCMSSNGLLCSGR 604
Query: 605 GTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQC-------LHPHN-LSQAILDQ 656
G C CG C C P S G CE CPTC AC C++C LH N ++ D+
Sbjct: 605 GKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDE 664
Query: 657 CKT--------------------SCALMEQQH---------YVDQTSECFSSPSYLRIFF 687
++ C + Q + YV + EC P L +
Sbjct: 665 IESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLL 724
Query: 688 IIFIVTFLIGLLKVLIIRQVI 708
+ LIGL +LI + +I
Sbjct: 725 SVMGAILLIGLAALLIWKLLI 745
>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
Length = 825
Score = 474 bits (1221), Expect = e-133
Identities = 249/647 (38%), Positives = 359/647 (55%), Gaps = 36/647 (5%)
Query: 28 WAAWVFSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGS-RSERCDIV 86
W + S+ Q ++NRC +NA SC C+ GP CGWC F+ G S RCD +
Sbjct: 8 WIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDL 67
Query: 87 SNLISKGCSVDSIEYPSVHVIIPTENEIN---------------TQVTPGEVSIQLRPGA 131
L KGC D IE P I + TQ+ P ++ ++LR G
Sbjct: 68 EALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGE 127
Query: 132 EANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSY 191
F LK + YP+DLYYL+D+S SM +++E + S+G DL +M + DFR+GFGS+
Sbjct: 128 PQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSF 187
Query: 192 VDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNID 251
V+KTV PYIS P ++ N C+ +C P Y +VLSLT F + V +Q+ISGN+D
Sbjct: 188 VEKTVMPYISTTPAKLRNPCTSEQ-NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLD 246
Query: 252 TPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKN 311
+PEGGFDA++Q AVC S IGWR RLL+ TD H A D KL GIV+PNDG CHL+N
Sbjct: 247 SPEGGFDAIMQVAVCGSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN 305
Query: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
N+Y S ++PS+ L +KL +NNI IFAV + YK+L L+P + G + + ++
Sbjct: 306 NMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSS 365
Query: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEG--CRNVTSNDEVL 429
N+ L+++AY L SEV ++ +G+ + + C +G G G C N++ DEV
Sbjct: 366 NVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQ 425
Query: 430 FNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKG-KCVD--ETF 486
F +++T KC ++ I+P+GF E ++ + C C+C+ P+ KC + TF
Sbjct: 426 FEISITSNKCPKKDSDSFK-IRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTF 484
Query: 487 LDSKCFQCDENK----CHFDEDQFSSES----CKSHKDQPVCSGRGVCVCGKCSCHK-IK 537
C +C+E + C D+ +SE C+ +CS G CVCG+C C K
Sbjct: 485 ECGAC-RCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDN 543
Query: 538 LGKVY-GKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNS 596
++Y GK+CE D+F+C +G +C G+G C+ C+C + G C C S C S
Sbjct: 544 TNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDC-SLDTSTCEAS 602
Query: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQC 643
GQ+C+GRG C CG C+CTDP+ G+ CE C TC C E+ C+QC
Sbjct: 603 NGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQC 649
>gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens]
Length = 789
Score = 474 bits (1221), Expect = e-133
Identities = 249/647 (38%), Positives = 359/647 (55%), Gaps = 36/647 (5%)
Query: 28 WAAWVFSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGS-RSERCDIV 86
W + S+ Q ++NRC +NA SC C+ GP CGWC F+ G S RCD +
Sbjct: 8 WIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDL 67
Query: 87 SNLISKGCSVDSIEYPSVHVIIPTENEIN---------------TQVTPGEVSIQLRPGA 131
L KGC D IE P I + TQ+ P ++ ++LR G
Sbjct: 68 EALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGE 127
Query: 132 EANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSY 191
F LK + YP+DLYYL+D+S SM +++E + S+G DL +M + DFR+GFGS+
Sbjct: 128 PQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSF 187
Query: 192 VDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNID 251
V+KTV PYIS P ++ N C+ +C P Y +VLSLT F + V +Q+ISGN+D
Sbjct: 188 VEKTVMPYISTTPAKLRNPCTSEQ-NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLD 246
Query: 252 TPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKN 311
+PEGGFDA++Q AVC S IGWR RLL+ TD H A D KL GIV+PNDG CHL+N
Sbjct: 247 SPEGGFDAIMQVAVCGSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN 305
Query: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
N+Y S ++PS+ L +KL +NNI IFAV + YK+L L+P + G + + ++
Sbjct: 306 NMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSS 365
Query: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEG--CRNVTSNDEVL 429
N+ L+++AY L SEV ++ +G+ + + C +G G G C N++ DEV
Sbjct: 366 NVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQ 425
Query: 430 FNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKG-KCVD--ETF 486
F +++T KC ++ I+P+GF E ++ + C C+C+ P+ KC + TF
Sbjct: 426 FEISITSNKCPKKDSDSFK-IRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTF 484
Query: 487 LDSKCFQCDENK----CHFDEDQFSSES----CKSHKDQPVCSGRGVCVCGKCSCHK-IK 537
C +C+E + C D+ +SE C+ +CS G CVCG+C C K
Sbjct: 485 ECGAC-RCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDN 543
Query: 538 LGKVY-GKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNS 596
++Y GK+CE D+F+C +G +C G+G C+ C+C + G C C S C S
Sbjct: 544 TNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDC-SLDTSTCEAS 602
Query: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQC 643
GQ+C+GRG C CG C+CTDP+ G+ CE C TC C E+ C+QC
Sbjct: 603 NGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQC 649
>gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 474 bits (1221), Expect = e-133
Identities = 249/647 (38%), Positives = 359/647 (55%), Gaps = 36/647 (5%)
Query: 28 WAAWVFSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGS-RSERCDIV 86
W + S+ Q ++NRC +NA SC C+ GP CGWC F+ G S RCD +
Sbjct: 8 WIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDL 67
Query: 87 SNLISKGCSVDSIEYPSVHVIIPTENEIN---------------TQVTPGEVSIQLRPGA 131
L KGC D IE P I + TQ+ P ++ ++LR G
Sbjct: 68 EALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGE 127
Query: 132 EANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSY 191
F LK + YP+DLYYL+D+S SM +++E + S+G DL +M + DFR+GFGS+
Sbjct: 128 PQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSF 187
Query: 192 VDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNID 251
V+KTV PYIS P ++ N C+ +C P Y +VLSLT F + V +Q+ISGN+D
Sbjct: 188 VEKTVMPYISTTPAKLRNPCTSEQ-NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLD 246
Query: 252 TPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKN 311
+PEGGFDA++Q AVC S IGWR RLL+ TD H A D KL GIV+PNDG CHL+N
Sbjct: 247 SPEGGFDAIMQVAVCGSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN 305
Query: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
N+Y S ++PS+ L +KL +NNI IFAV + YK+L L+P + G + + ++
Sbjct: 306 NMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSS 365
Query: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEG--CRNVTSNDEVL 429
N+ L+++AY L SEV ++ +G+ + + C +G G G C N++ DEV
Sbjct: 366 NVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQ 425
Query: 430 FNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKG-KCVD--ETF 486
F +++T KC ++ I+P+GF E ++ + C C+C+ P+ KC + TF
Sbjct: 426 FEISITSNKCPKKDSDSFK-IRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTF 484
Query: 487 LDSKCFQCDENK----CHFDEDQFSSES----CKSHKDQPVCSGRGVCVCGKCSCHK-IK 537
C +C+E + C D+ +SE C+ +CS G CVCG+C C K
Sbjct: 485 ECGAC-RCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDN 543
Query: 538 LGKVY-GKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNS 596
++Y GK+CE D+F+C +G +C G+G C+ C+C + G C C S C S
Sbjct: 544 TNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDC-SLDTSTCEAS 602
Query: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQC 643
GQ+C+GRG C CG C+CTDP+ G+ CE C TC C E+ C+QC
Sbjct: 603 NGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQC 649
>gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 474 bits (1221), Expect = e-133
Identities = 249/647 (38%), Positives = 359/647 (55%), Gaps = 36/647 (5%)
Query: 28 WAAWVFSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGS-RSERCDIV 86
W + S+ Q ++NRC +NA SC C+ GP CGWC F+ G S RCD +
Sbjct: 8 WIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDL 67
Query: 87 SNLISKGCSVDSIEYPSVHVIIPTENEIN---------------TQVTPGEVSIQLRPGA 131
L KGC D IE P I + TQ+ P ++ ++LR G
Sbjct: 68 EALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGE 127
Query: 132 EANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSY 191
F LK + YP+DLYYL+D+S SM +++E + S+G DL +M + DFR+GFGS+
Sbjct: 128 PQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSF 187
Query: 192 VDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNID 251
V+KTV PYIS P ++ N C+ +C P Y +VLSLT F + V +Q+ISGN+D
Sbjct: 188 VEKTVMPYISTTPAKLRNPCTSEQ-NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLD 246
Query: 252 TPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKN 311
+PEGGFDA++Q AVC S IGWR RLL+ TD H A D KL GIV+PNDG CHL+N
Sbjct: 247 SPEGGFDAIMQVAVCGSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN 305
Query: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
N+Y S ++PS+ L +KL +NNI IFAV + YK+L L+P + G + + ++
Sbjct: 306 NMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSS 365
Query: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEG--CRNVTSNDEVL 429
N+ L+++AY L SEV ++ +G+ + + C +G G G C N++ DEV
Sbjct: 366 NVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQ 425
Query: 430 FNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKG-KCVD--ETF 486
F +++T KC ++ I+P+GF E ++ + C C+C+ P+ KC + TF
Sbjct: 426 FEISITSNKCPKKDSDSFK-IRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTF 484
Query: 487 LDSKCFQCDENK----CHFDEDQFSSES----CKSHKDQPVCSGRGVCVCGKCSCHK-IK 537
C +C+E + C D+ +SE C+ +CS G CVCG+C C K
Sbjct: 485 ECGAC-RCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDN 543
Query: 538 LGKVY-GKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNS 596
++Y GK+CE D+F+C +G +C G+G C+ C+C + G C C S C S
Sbjct: 544 TNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDC-SLDTSTCEAS 602
Query: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQC 643
GQ+C+GRG C CG C+CTDP+ G+ CE C TC C E+ C+QC
Sbjct: 603 NGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQC 649
>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
Length = 819
Score = 474 bits (1221), Expect = e-133
Identities = 249/647 (38%), Positives = 359/647 (55%), Gaps = 36/647 (5%)
Query: 28 WAAWVFSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGS-RSERCDIV 86
W + S+ Q ++NRC +NA SC C+ GP CGWC F+ G S RCD +
Sbjct: 8 WIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDL 67
Query: 87 SNLISKGCSVDSIEYPSVHVIIPTENEIN---------------TQVTPGEVSIQLRPGA 131
L KGC D IE P I + TQ+ P ++ ++LR G
Sbjct: 68 EALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGE 127
Query: 132 EANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSY 191
F LK + YP+DLYYL+D+S SM +++E + S+G DL +M + DFR+GFGS+
Sbjct: 128 PQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSF 187
Query: 192 VDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNID 251
V+KTV PYIS P ++ N C+ +C P Y +VLSLT F + V +Q+ISGN+D
Sbjct: 188 VEKTVMPYISTTPAKLRNPCTSEQ-NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLD 246
Query: 252 TPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKN 311
+PEGGFDA++Q AVC S IGWR RLL+ TD H A D KL GIV+PNDG CHL+N
Sbjct: 247 SPEGGFDAIMQVAVCGSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN 305
Query: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
N+Y S ++PS+ L +KL +NNI IFAV + YK+L L+P + G + + ++
Sbjct: 306 NMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSS 365
Query: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEG--CRNVTSNDEVL 429
N+ L+++AY L SEV ++ +G+ + + C +G G G C N++ DEV
Sbjct: 366 NVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQ 425
Query: 430 FNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKG-KCVD--ETF 486
F +++T KC ++ I+P+GF E ++ + C C+C+ P+ KC + TF
Sbjct: 426 FEISITSNKCPKKDSDSFK-IRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTF 484
Query: 487 LDSKCFQCDENK----CHFDEDQFSSES----CKSHKDQPVCSGRGVCVCGKCSCHK-IK 537
C +C+E + C D+ +SE C+ +CS G CVCG+C C K
Sbjct: 485 ECGAC-RCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDN 543
Query: 538 LGKVY-GKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNS 596
++Y GK+CE D+F+C +G +C G+G C+ C+C + G C C S C S
Sbjct: 544 TNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDC-SLDTSTCEAS 602
Query: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQC 643
GQ+C+GRG C CG C+CTDP+ G+ CE C TC C E+ C+QC
Sbjct: 603 NGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQC 649
>gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens]
Length = 801
Score = 474 bits (1221), Expect = e-133
Identities = 249/647 (38%), Positives = 359/647 (55%), Gaps = 36/647 (5%)
Query: 28 WAAWVFSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGS-RSERCDIV 86
W + S+ Q ++NRC +NA SC C+ GP CGWC F+ G S RCD +
Sbjct: 8 WIGLISSVCCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDL 67
Query: 87 SNLISKGCSVDSIEYPSVHVIIPTENEIN---------------TQVTPGEVSIQLRPGA 131
L KGC D IE P I + TQ+ P ++ ++LR G
Sbjct: 68 EALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGE 127
Query: 132 EANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSY 191
F LK + YP+DLYYL+D+S SM +++E + S+G DL +M + DFR+GFGS+
Sbjct: 128 PQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSF 187
Query: 192 VDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNID 251
V+KTV PYIS P ++ N C+ +C P Y +VLSLT F + V +Q+ISGN+D
Sbjct: 188 VEKTVMPYISTTPAKLRNPCTSEQ-NCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLD 246
Query: 252 TPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKN 311
+PEGGFDA++Q AVC S IGWR RLL+ TD H A D KL GIV+PNDG CHL+N
Sbjct: 247 SPEGGFDAIMQVAVCGSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN 305
Query: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
N+Y S ++PS+ L +KL +NNI IFAV + YK+L L+P + G + + ++
Sbjct: 306 NMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSS 365
Query: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEG--CRNVTSNDEVL 429
N+ L+++AY L SEV ++ +G+ + + C +G G G C N++ DEV
Sbjct: 366 NVIQLIIDAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQ 425
Query: 430 FNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKG-KCVD--ETF 486
F +++T KC ++ I+P+GF E ++ + C C+C+ P+ KC + TF
Sbjct: 426 FEISITSNKCPKKDSDSFK-IRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTF 484
Query: 487 LDSKCFQCDENK----CHFDEDQFSSES----CKSHKDQPVCSGRGVCVCGKCSCHK-IK 537
C +C+E + C D+ +SE C+ +CS G CVCG+C C K
Sbjct: 485 ECGAC-RCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDN 543
Query: 538 LGKVY-GKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNS 596
++Y GK+CE D+F+C +G +C G+G C+ C+C + G C C S C S
Sbjct: 544 TNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDC-SLDTSTCEAS 602
Query: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQC 643
GQ+C+GRG C CG C+CTDP+ G+ CE C TC C E+ C+QC
Sbjct: 603 NGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQC 649
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 432 bits (1110), Expect = e-121
Identities = 246/722 (34%), Positives = 365/722 (50%), Gaps = 57/722 (7%)
Query: 36 VLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGSR-SERCDIVSNLISKGC 94
+L LG C +SC C+ GP C WC + +F G S RCD L+ +GC
Sbjct: 14 LLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGC 73
Query: 95 SVDSIEYPSVHVIIPTENEIN---TQVTPGEVSIQLRPGAEANFMLKVHPLKKYPVDLYY 151
+ D I P+ + T+ + N Q++P +V++ LRPG A F + K YP+DLYY
Sbjct: 74 AADDIMDPTS--LAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYY 131
Query: 152 LVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYISIHPERIHNQC 211
L+D+S SM +++ + +G DL R + + R+GFGS+VDKTV P+++ HP+++ N C
Sbjct: 132 LMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPC 191
Query: 212 SDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIG 271
+ +C PP + HVL LT N +F+ V +Q ISGN+D PEGG DAM+Q A C IG
Sbjct: 192 PNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIG 251
Query: 272 WRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKNNVYVKSTTMEHPSLGQLSEK 331
WR RLL+ TD H A D KL I+ PNDG CHL++N+Y +S ++PS+GQL+ K
Sbjct: 252 WR-NVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHK 310
Query: 332 LIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEAYQKLISEVKVQ 391
L +NNI IFAV + Y+ L ++P + GE+ ++N+ L+ AY KL S V +
Sbjct: 311 LAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLD 370
Query: 392 VENQVQGIYFNITAICPDG--SRKPGMEGCRNVTSNDEVLFNVTVTMKKCDVTGGKNYAI 449
+ + C +G R C V N + F V VT +C + +
Sbjct: 371 HNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECI---QEQSFV 427
Query: 450 IKPIGFNETAKIHIHRNCSCQCEDNRGPKGKCVDETFLDSKCFQCDE----NKCHFDEDQ 505
I+ +GF + + + C C+C D + C + FL+ +CD C
Sbjct: 428 IRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQG 487
Query: 506 FSSE----SCKSHKDQPVCSGRGVCVCGKCSCHKIKL-GK-VYGKYCEKDDFSCPYHHGN 559
SS+ SC+ + +CSG G CVCG+C CH + GK +YG+YCE D +C ++G
Sbjct: 488 RSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQ 547
Query: 560 LCAGHGE--CEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDP 617
+C G G C G+C+C G+EG CQC + C+N + CSGRG C C CEC
Sbjct: 548 VCGGPGRGLCFCGKCRCHPGFEGSACQC-ERTTEGCLNPRRVECSGRGRCRCNVCECHSG 606
Query: 618 RSIGRFCEHCPTCYTACKENWNCMQCL------HPHNLSQAI------------------ 653
+ C+ CP C + C + +C +CL N S A
Sbjct: 607 YQL-PLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKER 665
Query: 654 -LDQCKTSCALMEQQH------YVDQTSECFSSPSYLRIFFIIFIVTFLIGLLKVLIIRQ 706
+ C + L +Q YVD++ EC + P+ I LIG+L ++I +
Sbjct: 666 DSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWKA 725
Query: 707 VI 708
+I
Sbjct: 726 LI 727
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 432 bits (1110), Expect = e-121
Identities = 246/722 (34%), Positives = 365/722 (50%), Gaps = 57/722 (7%)
Query: 36 VLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGSR-SERCDIVSNLISKGC 94
+L LG C +SC C+ GP C WC + +F G S RCD L+ +GC
Sbjct: 14 LLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGC 73
Query: 95 SVDSIEYPSVHVIIPTENEIN---TQVTPGEVSIQLRPGAEANFMLKVHPLKKYPVDLYY 151
+ D I P+ + T+ + N Q++P +V++ LRPG A F + K YP+DLYY
Sbjct: 74 AADDIMDPTS--LAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYY 131
Query: 152 LVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYISIHPERIHNQC 211
L+D+S SM +++ + +G DL R + + R+GFGS+VDKTV P+++ HP+++ N C
Sbjct: 132 LMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPC 191
Query: 212 SDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIG 271
+ +C PP + HVL LT N +F+ V +Q ISGN+D PEGG DAM+Q A C IG
Sbjct: 192 PNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIG 251
Query: 272 WRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHLKNNVYVKSTTMEHPSLGQLSEK 331
WR RLL+ TD H A D KL I+ PNDG CHL++N+Y +S ++PS+GQL+ K
Sbjct: 252 WR-NVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHK 310
Query: 332 LIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEAYQKLISEVKVQ 391
L +NNI IFAV + Y+ L ++P + GE+ ++N+ L+ AY KL S V +
Sbjct: 311 LAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLD 370
Query: 392 VENQVQGIYFNITAICPDG--SRKPGMEGCRNVTSNDEVLFNVTVTMKKCDVTGGKNYAI 449
+ + C +G R C V N + F V VT +C + +
Sbjct: 371 HNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECI---QEQSFV 427
Query: 450 IKPIGFNETAKIHIHRNCSCQCEDNRGPKGKCVDETFLDSKCFQCDE----NKCHFDEDQ 505
I+ +GF + + + C C+C D + C + FL+ +CD C
Sbjct: 428 IRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQG 487
Query: 506 FSSE----SCKSHKDQPVCSGRGVCVCGKCSCHKIKL-GK-VYGKYCEKDDFSCPYHHGN 559
SS+ SC+ + +CSG G CVCG+C CH + GK +YG+YCE D +C ++G
Sbjct: 488 RSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQ 547
Query: 560 LCAGHGE--CEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDP 617
+C G G C G+C+C G+EG CQC + C+N + CSGRG C C CEC
Sbjct: 548 VCGGPGRGLCFCGKCRCHPGFEGSACQC-ERTTEGCLNPRRVECSGRGRCRCNVCECHSG 606
Query: 618 RSIGRFCEHCPTCYTACKENWNCMQCL------HPHNLSQAI------------------ 653
+ C+ CP C + C + +C +CL N S A
Sbjct: 607 YQL-PLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKER 665
Query: 654 -LDQCKTSCALMEQQH------YVDQTSECFSSPSYLRIFFIIFIVTFLIGLLKVLIIRQ 706
+ C + L +Q YVD++ EC + P+ I LIG+L ++I +
Sbjct: 666 DSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWKA 725
Query: 707 VI 708
+I
Sbjct: 726 LI 727
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 403 bits (1035), Expect = e-112
Identities = 219/635 (34%), Positives = 336/635 (52%), Gaps = 35/635 (5%)
Query: 52 AASCARCLALGPECGWCVQEDFI-SGGSRSERCDIVSNLISKGCSVDSIEYPSVHVIIPT 110
A SC +C+ P C WC Q +F SG + + RC L+++GC ++ +E P +
Sbjct: 48 APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQ 107
Query: 111 ENEIN--------TQVTPGEVSIQLRPGAEANFMLKVHPLKKYPVDLYYLVDVSASMHNN 162
+ ++ TQ+ P V + LRPG ++ + YPVDLYYL+D+S SM ++
Sbjct: 108 DQPLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDD 167
Query: 163 IEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYISIHPERIHNQCSDYNLDCMPPH 222
+E++ +G+ L ++ + R+GFGS+VDKTV P++S P ++ + C C P
Sbjct: 168 LERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPF 227
Query: 223 GYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLV 282
+ HVLSLT + FE+ V RQ +SGN+D+PEGGFDA+LQAA+C+ IGWR RLL+
Sbjct: 228 SFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWR-NVSRLLVF 286
Query: 283 MTDQTSHLALDSKLAGIVVPNDGNCHL-KNNVYVKSTTMEHPSLGQLSEKLIDNNINVIF 341
+D T H A D KL GI +P+DG+CHL N +Y +ST ++PS+GQ+++ L NI IF
Sbjct: 287 TSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIF 346
Query: 342 AVQGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEAYQKLISEVKVQVENQVQGIYF 401
AV Y++L L+P + GE+ ++N+ L+++AY L S V ++ + G++
Sbjct: 347 AVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHI 406
Query: 402 NITAICPDGSRKPGME----GCRNVTSNDEVLFNVTVTMKKCDVTGGKNYAIIKPIGFNE 457
+ + C ++ G C +V N V F V++ C + ++ +GF+E
Sbjct: 407 SYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC--LPEPHLLRLRALGFSE 464
Query: 458 TAKIHIHRNCSCQCEDNRGPKGKCVD-ETFLDSKCFQCDENK----CHFDEDQFSSESCK 512
+ +H C C C D + C D + L C + C + SS +
Sbjct: 465 ELIVELHTLCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLE 524
Query: 513 S-----HKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGEC 567
S + P+CSG+G C CG+CSC G+ G CE DD SC H G LC G G C
Sbjct: 525 SGCRAPNGTGPLCSGKGHCQCGRCSCS----GQSSGHLCECDDASCERHEGILCGGFGRC 580
Query: 568 EAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCEHC 627
+ G C C + G C+C S C++ +G +CSG G C C RC+C D G C+ C
Sbjct: 581 QCGVCHCHANRTGRACEC-SGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYYGALCDQC 638
Query: 628 PTCYTACKENWNCMQCLHPHNLSQAILDQCKTSCA 662
P C T C+ + +C +C + + C T+CA
Sbjct: 639 PGCKTPCERHRDCAEC--GAFRTGPLATNCSTACA 671
>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
Length = 1805
Score = 323 bits (827), Expect = 5e-88
Identities = 207/700 (29%), Positives = 338/700 (48%), Gaps = 67/700 (9%)
Query: 22 GPASFLWAAWVFSLVLGLGQGED--NRCASSNAASCARCLALGPECGWCVQEDFISGGSR 79
GP WA + + ++ + NRC + SC C+ + +C +C E F R
Sbjct: 3 GPRPSPWARLLLAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMF-----R 57
Query: 80 SERCDIVSNLISKGCSVDSIEYPSVHVIIPTENEINT-----QVTPGEVSIQLRPGAEAN 134
RC+ + L++ GC +SI I E +I+T Q++P + ++LRPG E +
Sbjct: 58 DRRCNTQAELLAAGCQRESIVVMESSFQITEETQIDTTLRRSQMSPQGLRVRLRPGEERH 117
Query: 135 FMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDK 194
F L+V + PVDLY L+D S SM ++++ L +G +L+R ++ + D+ +GFG +VDK
Sbjct: 118 FELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDK 177
Query: 195 TVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPE 254
P + PE++ + + PP + +V+SLTE++ EF + ++ISGN+D PE
Sbjct: 178 VSVPQTDMRPEKLKEPWPNSD----PPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPE 233
Query: 255 GGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALD--SKLAGIVVPNDGNCHL-KN 311
GGFDA+LQ AVC IGWR ++ LL+ T+ H D + LAGI+ ND CHL
Sbjct: 234 GGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTT 293
Query: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
Y + T ++PS+ L L +NI IFAV + +Y+ L P + G ++ ++
Sbjct: 294 GTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSS 353
Query: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCRNVTSNDEVLFN 431
N+ L+ EA+ ++ S + ++ + +G+ +T+ +R G ++ + ++
Sbjct: 354 NIVELLEEAFNRIRSNLDIRALDSPRGLRTEVTSKMFQKTR----TGSFHIRRGEVGIYQ 409
Query: 432 VTV-TMKKCDVT-------GGKNYAIIKPIGFNETAKIHIHRNCS-CQCEDNRGPK-GKC 481
V + ++ D T K +KP F++ K+ C C CE + + +C
Sbjct: 410 VQLRALEHVDGTHVCQLPEDQKGNIHLKP-SFSDGLKMDAGIICDVCTCELQKEVRSARC 468
Query: 482 -VDETFLDSKCFQCDE----NKCHFDEDQFSS-ESCKSHKDQPVCSGRGVCVCGKCSCHK 535
+ F+ +C C E C+ S + C + CSGRG C CG C C+
Sbjct: 469 SFNGDFVCGQCV-CSEGWSGQTCNCSTGSLSDIQPCLREGEDKPCSGRGECQCGHCVCY- 526
Query: 536 IKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVN 595
G+ G++CE D+F CP G LC G C G+C C GW G C CP + A C++
Sbjct: 527 -GEGRYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNAT-CID 584
Query: 596 SKGQVCSGRGTCVCGRCECTDPRSIG-------------------RFCEHCPTCYTACKE 636
S G +C+GRG C CGRC C R C C T K+
Sbjct: 585 SNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGEKK 644
Query: 637 NWNCMQCLHPHNLSQAILDQCKTSCALMEQQHYVDQTSEC 676
C +C N ++D+ K + ++ + + D+ +C
Sbjct: 645 GRTCEEC----NFKVKMVDELKRAEEVVVRCSFRDEDDDC 680
>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
Length = 1822
Score = 323 bits (827), Expect = 5e-88
Identities = 207/700 (29%), Positives = 338/700 (48%), Gaps = 67/700 (9%)
Query: 22 GPASFLWAAWVFSLVLGLGQGED--NRCASSNAASCARCLALGPECGWCVQEDFISGGSR 79
GP WA + + ++ + NRC + SC C+ + +C +C E F R
Sbjct: 3 GPRPSPWARLLLAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMF-----R 57
Query: 80 SERCDIVSNLISKGCSVDSIEYPSVHVIIPTENEINT-----QVTPGEVSIQLRPGAEAN 134
RC+ + L++ GC +SI I E +I+T Q++P + ++LRPG E +
Sbjct: 58 DRRCNTQAELLAAGCQRESIVVMESSFQITEETQIDTTLRRSQMSPQGLRVRLRPGEERH 117
Query: 135 FMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDK 194
F L+V + PVDLY L+D S SM ++++ L +G +L+R ++ + D+ +GFG +VDK
Sbjct: 118 FELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDK 177
Query: 195 TVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPE 254
P + PE++ + + PP + +V+SLTE++ EF + ++ISGN+D PE
Sbjct: 178 VSVPQTDMRPEKLKEPWPNSD----PPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPE 233
Query: 255 GGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALD--SKLAGIVVPNDGNCHL-KN 311
GGFDA+LQ AVC IGWR ++ LL+ T+ H D + LAGI+ ND CHL
Sbjct: 234 GGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTT 293
Query: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
Y + T ++PS+ L L +NI IFAV + +Y+ L P + G ++ ++
Sbjct: 294 GTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSS 353
Query: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCRNVTSNDEVLFN 431
N+ L+ EA+ ++ S + ++ + +G+ +T+ +R G ++ + ++
Sbjct: 354 NIVELLEEAFNRIRSNLDIRALDSPRGLRTEVTSKMFQKTR----TGSFHIRRGEVGIYQ 409
Query: 432 VTV-TMKKCDVT-------GGKNYAIIKPIGFNETAKIHIHRNCS-CQCEDNRGPK-GKC 481
V + ++ D T K +KP F++ K+ C C CE + + +C
Sbjct: 410 VQLRALEHVDGTHVCQLPEDQKGNIHLKP-SFSDGLKMDAGIICDVCTCELQKEVRSARC 468
Query: 482 -VDETFLDSKCFQCDE----NKCHFDEDQFSS-ESCKSHKDQPVCSGRGVCVCGKCSCHK 535
+ F+ +C C E C+ S + C + CSGRG C CG C C+
Sbjct: 469 SFNGDFVCGQCV-CSEGWSGQTCNCSTGSLSDIQPCLREGEDKPCSGRGECQCGHCVCY- 526
Query: 536 IKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVN 595
G+ G++CE D+F CP G LC G C G+C C GW G C CP + A C++
Sbjct: 527 -GEGRYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNAT-CID 584
Query: 596 SKGQVCSGRGTCVCGRCECTDPRSIG-------------------RFCEHCPTCYTACKE 636
S G +C+GRG C CGRC C R C C T K+
Sbjct: 585 SNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGEKK 644
Query: 637 NWNCMQCLHPHNLSQAILDQCKTSCALMEQQHYVDQTSEC 676
C +C N ++D+ K + ++ + + D+ +C
Sbjct: 645 GRTCEEC----NFKVKMVDELKRAEEVVVRCSFRDEDDDC 680
>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
Length = 1752
Score = 323 bits (827), Expect = 5e-88
Identities = 207/700 (29%), Positives = 338/700 (48%), Gaps = 67/700 (9%)
Query: 22 GPASFLWAAWVFSLVLGLGQGED--NRCASSNAASCARCLALGPECGWCVQEDFISGGSR 79
GP WA + + ++ + NRC + SC C+ + +C +C E F R
Sbjct: 3 GPRPSPWARLLLAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMF-----R 57
Query: 80 SERCDIVSNLISKGCSVDSIEYPSVHVIIPTENEINT-----QVTPGEVSIQLRPGAEAN 134
RC+ + L++ GC +SI I E +I+T Q++P + ++LRPG E +
Sbjct: 58 DRRCNTQAELLAAGCQRESIVVMESSFQITEETQIDTTLRRSQMSPQGLRVRLRPGEERH 117
Query: 135 FMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDK 194
F L+V + PVDLY L+D S SM ++++ L +G +L+R ++ + D+ +GFG +VDK
Sbjct: 118 FELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDK 177
Query: 195 TVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPE 254
P + PE++ + + PP + +V+SLTE++ EF + ++ISGN+D PE
Sbjct: 178 VSVPQTDMRPEKLKEPWPNSD----PPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPE 233
Query: 255 GGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALD--SKLAGIVVPNDGNCHL-KN 311
GGFDA+LQ AVC IGWR ++ LL+ T+ H D + LAGI+ ND CHL
Sbjct: 234 GGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTT 293
Query: 312 NVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAA 371
Y + T ++PS+ L L +NI IFAV + +Y+ L P + G ++ ++
Sbjct: 294 GTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSS 353
Query: 372 NLNNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCRNVTSNDEVLFN 431
N+ L+ EA+ ++ S + ++ + +G+ +T+ +R G ++ + ++
Sbjct: 354 NIVELLEEAFNRIRSNLDIRALDSPRGLRTEVTSKMFQKTR----TGSFHIRRGEVGIYQ 409
Query: 432 VTV-TMKKCDVT-------GGKNYAIIKPIGFNETAKIHIHRNCS-CQCEDNRGPK-GKC 481
V + ++ D T K +KP F++ K+ C C CE + + +C
Sbjct: 410 VQLRALEHVDGTHVCQLPEDQKGNIHLKP-SFSDGLKMDAGIICDVCTCELQKEVRSARC 468
Query: 482 -VDETFLDSKCFQCDE----NKCHFDEDQFSS-ESCKSHKDQPVCSGRGVCVCGKCSCHK 535
+ F+ +C C E C+ S + C + CSGRG C CG C C+
Sbjct: 469 SFNGDFVCGQCV-CSEGWSGQTCNCSTGSLSDIQPCLREGEDKPCSGRGECQCGHCVCY- 526
Query: 536 IKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVN 595
G+ G++CE D+F CP G LC G C G+C C GW G C CP + A C++
Sbjct: 527 -GEGRYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNAT-CID 584
Query: 596 SKGQVCSGRGTCVCGRCECTDPRSIG-------------------RFCEHCPTCYTACKE 636
S G +C+GRG C CGRC C R C C T K+
Sbjct: 585 SNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGEKK 644
Query: 637 NWNCMQCLHPHNLSQAILDQCKTSCALMEQQHYVDQTSEC 676
C +C N ++D+ K + ++ + + D+ +C
Sbjct: 645 GRTCEEC----NFKVKMVDELKRAEEVVVRCSFRDEDDDC 680
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 120 bits (300), Expect = 6e-27
Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 37/172 (21%)
Query: 507 SSESCKSHKDQP---VCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAG 563
S C++ P +C GRG C CG C CH + G +G CE ++ C + G+ CAG
Sbjct: 47 SERRCRAPGQPPGAALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWVCETYDGSTCAG 106
Query: 564 HGECEAGRCQCFSGWEGDRCQCPS-------AAAQHCVNSKGQVCSGRGTCVCGRCECTD 616
HG+C+ G+C+C GW GD CQ P+ + Q C NS+ +CS GTC CGRC+C +
Sbjct: 107 HGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDN 166
Query: 617 PRS----IGRFCE---------------------HCPTCYTACKENWNCMQC 643
G+FCE +C CY CK W+ +C
Sbjct: 167 SDGSGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNCY--CKAGWHGDKC 216
Score = 115 bits (289), Expect = 1e-25
Identities = 73/246 (29%), Positives = 104/246 (42%), Gaps = 61/246 (24%)
Query: 469 CQCEDNRGPKGKCVDETFLD-----SKCFQCDENKC----HFDEDQF--------SSESC 511
C+C+D +C+D+ + KC+ C C H D+ +F S C
Sbjct: 178 CECDDR-----ECIDDETEEICGGHGKCY-CGNCYCKAGWHGDKCEFQCDITPWESKRRC 231
Query: 512 KSHKDQPVCSGRGVCVCGKCSCHKIK----LGKVYGKYCEKDDFSC----PYHHGNLCAG 563
S D +CS RG CVCG+C+CH + G ++G CE D+ C + + C+G
Sbjct: 232 TS-PDGKICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSG 290
Query: 564 HGECEAGRCQCFSGWEGDRCQCPSA-------AAQHCVNSKGQVCSGRGTCVCGRCECTD 616
HG+C GRC C +GW G +C+ P + + + C S CSGRG C CG+C C
Sbjct: 291 HGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYP 350
Query: 617 P---RSIGRFCE------------------HCPTCYTACKENWNCMQCLHPHNLSQAILD 655
P R G+ CE C C+ W C HP + +
Sbjct: 351 PGDRRVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMT-EE 409
Query: 656 QCKTSC 661
Q K C
Sbjct: 410 QSKNLC 415
Score = 113 bits (282), Expect = 8e-25
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 464 HRNCSC-QCEDNRGPKGKCVDETFLDSKCFQCDENKCHFDEDQFSSESCKSHKDQPVCSG 522
H C+C +C+ G GK +C+ + + S C+ D P CSG
Sbjct: 291 HGQCNCGRCDCKAGWYGK------------KCEHPQSCTLSAEESIRKCQGSSDLP-CSG 337
Query: 523 RGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDR 582
RG C CGKC+C+ +VYGK CE DD C G +C GHG C GRC C GW G
Sbjct: 338 RGKCECGKCTCYPPGDRRVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKL 397
Query: 583 CQCP-------SAAAQHCVNSKGQVCSGRGTCVCGRCECTDPR--SIGRFCE 625
CQ P + C ++ G +CSG+G+C CG+C C+ G FC+
Sbjct: 398 CQHPRKCNMTEEQSKNLCESADGILCSGKGSCHCGKCICSAEEWYISGEFCD 449
Score = 88.2 bits (217), Expect = 3e-17
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Query: 464 HRNCSCQCEDNRGPKGKCVDETFLDSKCFQCDENKCHFDEDQFSSESCKSHKDQPVCSGR 523
H CSC G+CV E K Q KC+ E+Q S C+S D +CSG+
Sbjct: 379 HGTCSC---------GRCVCERGWFGKLCQ-HPRKCNMTEEQ-SKNLCES-ADGILCSGK 426
Query: 524 GVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRC 583
G C CGKC C + + G++C+ DD C H G +C G+G C G C+C+ GW G+ C
Sbjct: 427 GSCHCGKCIC-SAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWDGWNGNAC 485
Query: 584 Q 584
+
Sbjct: 486 E 486
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 79.7 bits (195), Expect = 9e-15
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 21/167 (12%)
Query: 520 CSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWE 579
C G G CV G C C LG + +CP LC+G+G+ GRC CFSGW+
Sbjct: 522 CHGNGECVSGTCHCFPGFLGPDCSRA------ACPV----LCSGNGQYSKGRCLCFSGWK 571
Query: 580 GDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWN 639
G C P+ C++ + C GRG C+ G C C G CE C +
Sbjct: 572 GTECDVPTT---QCIDPQ---CGGRGICIMGSCACNSGYK-GESCEEADCIDPGCSNHGV 624
Query: 640 CM--QCLHPHNLSQAILDQCKTSCALMEQQH--YVDQTSECFSSPSY 682
C+ +C + + KT C H Y+ ++ C P++
Sbjct: 625 CIHGECHCSPGWGGSNCEILKTMCPDQCSGHGTYLQESGSCTCDPNW 671
Score = 70.5 bits (171), Expect = 6e-12
Identities = 48/163 (29%), Positives = 59/163 (36%), Gaps = 46/163 (28%)
Query: 518 PVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSG 577
P C GRG+C+ G C+C+ G+ CE+ D P C+ HG C G C C G
Sbjct: 585 PQCGGRGICIMGSCACN----SGYKGESCEEADCIDPG-----CSNHGVCIHGECHCSPG 635
Query: 578 WEGDRCQ-----CPSAAAQH--------------------CVNSKGQV-CSGRGTCVCGR 611
W G C+ CP + H C N V C G C+ G
Sbjct: 636 WGGSNCEILKTMCPDQCSGHGTYLQESGSCTCDPNWTGPDCSNEICSVDCGSHGVCMGGT 695
Query: 612 CEC----TDPRSIGRFC-----EH--CPTCYTACKENWNCMQC 643
C C T P R C EH C C + WN C
Sbjct: 696 CRCEEGWTGPACNQRACHPRCAEHGTCKDGKCECSQGWNGEHC 738
Score = 54.3 bits (129), Expect = 4e-07
Identities = 42/151 (27%), Positives = 56/151 (37%), Gaps = 18/151 (11%)
Query: 493 QCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFS 552
+C CH F C +CSG G G+C C G C+
Sbjct: 527 ECVSGTCHCFPG-FLGPDCSRAACPVLCSGNGQYSKGRCLC----FSGWKGTECDVPTTQ 581
Query: 553 CPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRC 612
C C G G C G C C SG++G+ C+ C++ CS G C+ G C
Sbjct: 582 C---IDPQCGGRGICIMGSCACNSGYKGESCE-----EADCIDPG---CSNHGVCIHGEC 630
Query: 613 ECTDPRSIGRFCEHCPT-CYTACKENWNCMQ 642
C+ P G CE T C C + +Q
Sbjct: 631 HCS-PGWGGSNCEILKTMCPDQCSGHGTYLQ 660
Score = 54.3 bits (129), Expect = 4e-07
Identities = 57/244 (23%), Positives = 86/244 (35%), Gaps = 42/244 (17%)
Query: 469 CQCEDNRGPKGKCVDETFLDSKC-----FQCDENKCHFDEDQFSSESCKSHKDQPVCSGR 523
C C G + +T +C + + C D + ++ C + C
Sbjct: 630 CHCSPGWGGSNCEILKTMCPDQCSGHGTYLQESGSCTCDPN-WTGPDCSNEICSVDCGSH 688
Query: 524 GVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRC 583
GVC+ G C C + G + +C CA HG C+ G+C+C GW G+ C
Sbjct: 689 GVCMGGTCRCEEGWTGPACNQR------ACHPR----CAEHGTCKDGKCECSQGWNGEHC 738
Query: 584 Q---CPSAAAQHCVNSKGQVCSGRGTCVCGR----CECTDPRSIGRFCE-HCPTCYTACK 635
CP +C+ G C + C C P G C+ T T K
Sbjct: 739 TIEGCPG------------LCNSNGRCTLDQNGWHCVC-QPGWRGAGCDVAMETLCTDSK 785
Query: 636 ENW--NCMQCLHPHNLSQAILDQCKTSCALMEQQHYVDQTSECFSSPSYLRIFFIIFIVT 693
+N + C+ P Q+ L + Q D S+ SPS ++
Sbjct: 786 DNEGDGLIDCMDPDCCLQSSCQNQPYCRGLPDPQ---DIISQSLQSPSQQAAKSFYDRIS 842
Query: 694 FLIG 697
FLIG
Sbjct: 843 FLIG 846
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 77.8 bits (190), Expect = 4e-14
Identities = 53/180 (29%), Positives = 71/180 (39%), Gaps = 45/180 (25%)
Query: 520 CSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWE 579
C G G CV G C C LG K +CP LC+G+G+ G CQC+SGW+
Sbjct: 580 CHGNGECVSGVCHCFPGFLGADCAKA------ACPV----LCSGNGQYSKGTCQCYSGWK 629
Query: 580 GDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCEHC-------PTCYT 632
G C P C++ C G G+C+ G C C S G EHC PTC +
Sbjct: 630 GAECDVP---MNQCIDPS---CGGHGSCIDGNCVC----SAGYKGEHCEEVDCLDPTCSS 679
Query: 633 ---------ACKENWNCMQCLHPHNLSQAILDQCKTSCALMEQQHYVDQTSECFSSPSYL 683
C W + C + QC C+ Y+ T C P+++
Sbjct: 680 HGVCVNGECLCSPGWGGLNC-------ELARVQCPDQCS--GHGTYLPDTGLCSCDPNWM 730
Score = 63.2 bits (152), Expect = 9e-10
Identities = 53/202 (26%), Positives = 72/202 (35%), Gaps = 45/202 (22%)
Query: 470 QCED-NRGPKGKCVDETFLDSKCFQ---CDENKCHFDEDQFSSESCKSHKDQPVCSGRGV 525
QC D + G G C+D + S ++ C+E C P CS GV
Sbjct: 639 QCIDPSCGGHGSCIDGNCVCSAGYKGEHCEEVDCL----------------DPTCSSHGV 682
Query: 526 CVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGEC--EAGRCQCFSGWEGDRC 583
CV G+C C G CE CP + C+GHG + G C C W G C
Sbjct: 683 CVNGECLCSP----GWGGLNCELARVQCP----DQCSGHGTYLPDTGLCSCDPNWMGPDC 734
Query: 584 QCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNC--- 640
+ C G C+ G C C + + G C+ C+ C E+ C
Sbjct: 735 SVEVCSVD---------CGTHGVCIGGACRCEEGWT-GAACDQ-RVCHPRCIEHGTCKDG 783
Query: 641 -MQCLHPHNLSQAILDQCKTSC 661
+C N +D C C
Sbjct: 784 KCECREGWNGEHCTIDGCPDLC 805
Score = 56.2 bits (134), Expect = 1e-07
Identities = 46/167 (27%), Positives = 58/167 (34%), Gaps = 33/167 (19%)
Query: 493 QCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFS 552
+C CH F C +CSG G G C C+ G C+
Sbjct: 585 ECVSGVCHCFPG-FLGADCAKAACPVLCSGNGQYSKGTCQCY----SGWKGAECDVPMNQ 639
Query: 553 CPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRC 612
C C GHG C G C C +G++G+ C+ V+ CS G CV G C
Sbjct: 640 C---IDPSCGGHGSCIDGNCVCSAGYKGEHCE--------EVDCLDPTCSSHGVCVNGEC 688
Query: 613 ECTDPRSIGRFCE----HCP------------TCYTACKENWNCMQC 643
C+ P G CE CP T +C NW C
Sbjct: 689 LCS-PGWGGLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDC 734
Score = 53.1 bits (126), Expect = 9e-07
Identities = 39/149 (26%), Positives = 53/149 (35%), Gaps = 35/149 (23%)
Query: 470 QCEDNRGPKGKCVDETFLDSKCFQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCG 529
QC D G + +T L S CD N + C C GVC+ G
Sbjct: 705 QCPDQCSGHGTYLPDTGLCS----CDPN--------WMGPDCSVEVCSVDCGTHGVCIGG 752
Query: 530 KCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAA 589
C C + G D C C HG C+ G+C+C GW G+ C
Sbjct: 753 ACRCEEGWTGAAC------DQRVCHPR----CIEHGTCKDGKCECREGWNGEHC------ 796
Query: 590 AQHCVNSKGQVCSGRGTCVCG----RCEC 614
++ +C+G G C G +C C
Sbjct: 797 ---TIDGCPDLCNGNGRCTLGQNSWQCVC 822
Score = 50.8 bits (120), Expect = 5e-06
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 16/114 (14%)
Query: 503 EDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCA 562
E+ ++ +C P C G C GKC C + G++C D CP +LC
Sbjct: 757 EEGWTGAACDQRVCHPRCIEHGTCKDGKCECRE----GWNGEHCTID--GCP----DLCN 806
Query: 563 GHGECEAGR----CQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRC 612
G+G C G+ C C +GW G C A C ++K G C+ C
Sbjct: 807 GNGRCTLGQNSWQCVCQTGWRGPGCNV--AMETSCADNKDNEGDGLVDCLDPDC 858
>gi|157384973 tenascin R [Homo sapiens]
Length = 1358
Score = 74.3 bits (181), Expect = 4e-13
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 23/152 (15%)
Query: 468 SCQCEDNRGPKGKCVDETFLDSKCFQ---CDENKCHFDEDQFSSESCKSHKDQPVCSGRG 524
SC C N G GK E + C C + +C D + +S + C + CS RG
Sbjct: 185 SCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSE-YSGDDCSELRCPTDCSSRG 243
Query: 525 VCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQ 584
+CV G+C C + G+ + + CP C+G G C G C C G+ G+ C
Sbjct: 244 LCVDGECVCEEPYTGE------DCRELRCPGD----CSGKGRCANGTCLCEEGYVGEDC- 292
Query: 585 CPSAAAQHCVNSKGQVCSGRGTCVCGRCECTD 616
+ C+N+ CSGRG C G C C +
Sbjct: 293 ----GQRQCLNA----CSGRGQCEEGLCVCEE 316
Score = 55.1 bits (131), Expect = 2e-07
Identities = 39/128 (30%), Positives = 50/128 (39%), Gaps = 27/128 (21%)
Query: 520 CSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWE 579
CS RGVCV G+C C + G C + CP C+ G C G C C +
Sbjct: 208 CSSRGVCVDGQCICDS----EYSGDDCS--ELRCPTD----CSSRGLCVDGECVCEEPYT 257
Query: 580 GDRCQ---CPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKE 636
G+ C+ CP CSG+G C G C C + +G C C AC
Sbjct: 258 GEDCRELRCPGD------------CSGKGRCANGTCLC-EEGYVGEDCGQ-RQCLNACSG 303
Query: 637 NWNCMQCL 644
C + L
Sbjct: 304 RGQCEEGL 311
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/116 (33%), Positives = 48/116 (41%), Gaps = 26/116 (22%)
Query: 518 PVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSG 577
P CSG G C C I +GK C + CP C+ G C G+C C S
Sbjct: 173 PHCSGHGNFSFESCGC--ICNEGWFGKNCSEP--YCPLG----CSSRGVCVDGQCICDSE 224
Query: 578 WEGDRC---QCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCE--HCP 628
+ GD C +CP+ CS RG CV G C C +P + G C CP
Sbjct: 225 YSGDDCSELRCPTD------------CSSRGLCVDGECVCEEPYT-GEDCRELRCP 267
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 73.6 bits (179), Expect = 7e-13
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 27/179 (15%)
Query: 466 NCSCQCEDNRGPKGKCVDETFLDSKCF---QCDENKCHFDEDQFSSESCKSHKDQPVCSG 522
N +C CE+ G G+ + C +C+E +C DE F+ C + C
Sbjct: 327 NGTCYCEE--GFTGEDCGKPTCPHACHTQGRCEEGQCVCDEG-FAGVDCSEKRCPADCHN 383
Query: 523 RGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDR 582
RG CV G+C C G G + CP N C+GHG C G+C C G+ G+
Sbjct: 384 RGRCVDGRCECDDGFTGADCG------ELKCP----NGCSGHGRCVNGQCVCDEGYTGED 433
Query: 583 CQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCM 641
C + C N C RG CV G+C C + G C +C C ++ C+
Sbjct: 434 C-----SQLRCPND----CHSRGRCVEGKCVC-EQGFKGYDCSDM-SCPNDCHQHGRCV 481
Score = 72.8 bits (177), Expect = 1e-12
Identities = 62/203 (30%), Positives = 84/203 (41%), Gaps = 37/203 (18%)
Query: 469 CQCEDNRGPKGKCVDETFLDSKCF---QCDENKCHFDEDQFSSESCKSHKDQPVCSGRGV 525
C+C+D G G E + C +C +C DE ++ E C + C RG
Sbjct: 392 CECDD--GFTGADCGELKCPNGCSGHGRCVNGQCVCDEG-YTGEDCSQLRCPNDCHSRGR 448
Query: 526 CVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRC-- 583
CV GKC C + G + D SCP N C HG C G C C G+ G+ C
Sbjct: 449 CVEGKCVCEQGFKGY------DCSDMSCP----NDCHQHGRCVNGMCVCDDGYTGEDCRD 498
Query: 584 -QCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCM- 641
QCP + CS RG CV G+C C D + G C +C C C+
Sbjct: 499 RQCP------------RDCSNRGLCVDGQCVCEDGFT-GPDCAEL-SCPNDCHGQGRCVN 544
Query: 642 -QCL-HPHNLSQAILDQ-CKTSC 661
QC+ H + + +Q C + C
Sbjct: 545 GQCVCHEGFMGKDCKEQRCPSDC 567
Score = 65.5 bits (158), Expect = 2e-10
Identities = 58/197 (29%), Positives = 72/197 (36%), Gaps = 41/197 (20%)
Query: 467 CSCQCEDNRGPKGKCVDETFLDSKCF---QCDENKCHFDEDQFSSESCKSHKDQPVCSGR 523
C C CE G KG E C +C + +C D D F+ E C C+ +
Sbjct: 172 CGCVCEP--GWKGPNCSEPECPGNCHLRGRCIDGQCICD-DGFTGEDCSQLACPSDCNDQ 228
Query: 524 GVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRC 583
G CV G C C + G C ++ P HG C G C C G+ GD C
Sbjct: 229 GKCVNGVCICFE----GYAGADCSREICPVPCSEE-----HGTCVDGLCVCHDGFAGDDC 279
Query: 584 QCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCEH--CP------------T 629
P C+N+ C RG CV C C D G C CP T
Sbjct: 280 NKPL-----CLNN----CYNRGRCVENECVC-DEGFTGEDCSELICPNDCFDRGRCINGT 329
Query: 630 CYTACKENWNCMQCLHP 646
CY C+E + C P
Sbjct: 330 CY--CEEGFTGEDCGKP 344
Score = 65.1 bits (157), Expect = 2e-10
Identities = 50/164 (30%), Positives = 66/164 (40%), Gaps = 34/164 (20%)
Query: 462 HIHRNC---SCQCEDNRGPKGKCVDETFLDSKCFQ---CDENKCHFDEDQFSSESCKSHK 515
H H C C C+D G G+ + C C + +C ED F+ C
Sbjct: 475 HQHGRCVNGMCVCDD--GYTGEDCRDRQCPRDCSNRGLCVDGQC-VCEDGFTGPDCAELS 531
Query: 516 DQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCF 575
C G+G CV G+C CH+ GK C++ CP + C G G C G+C C
Sbjct: 532 CPNDCHGQGRCVNGQCVCHE----GFMGKDCKEQ--RCP----SDCHGQGRCVDGQCICH 581
Query: 576 SGWEGDRC---QCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTD 616
G+ G C CPS C+ G CV GRC C +
Sbjct: 582 EGFTGLDCGQHSCPSD------------CNNLGQCVSGRCICNE 613
Score = 58.9 bits (141), Expect = 2e-08
Identities = 42/133 (31%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 465 RNCSCQCEDNRG--PKGKCV-DETFLDSKCFQCD-ENKCHFD----------EDQFSSES 510
R C C NRG G+CV ++ F C + N CH + F +
Sbjct: 499 RQCPRDCS-NRGLCVDGQCVCEDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKD 557
Query: 511 CKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAG 570
CK + C G+G CV G+C CH+ G G++ SCP NL G+C +G
Sbjct: 558 CKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQH------SCPSDCNNL----GQCVSG 607
Query: 571 RCQCFSGWEGDRC 583
RC C G+ G+ C
Sbjct: 608 RCICNEGYSGEDC 620
Score = 58.5 bits (140), Expect = 2e-08
Identities = 60/223 (26%), Positives = 79/223 (35%), Gaps = 64/223 (28%)
Query: 467 CSCQCEDNRGPKGKCVD------ETFLDSKCFQ------CDENK---------CHFDEDQ 505
C C D +GKCV+ E + + C + C E CH D
Sbjct: 221 CPSDCND----QGKCVNGVCICFEGYAGADCSREICPVPCSEEHGTCVDGLCVCH---DG 273
Query: 506 FSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHG 565
F+ + C C RG CV +C C + G+ + + CP N C G
Sbjct: 274 FAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGE------DCSELICP----NDCFDRG 323
Query: 566 ECEAGRCQCFSGWEGDRC---QCPSAA-------AQHCVNSKGQV------------CSG 603
C G C C G+ G+ C CP A CV +G C
Sbjct: 324 RCINGTCYCEEGFTGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHN 383
Query: 604 RGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCM--QCL 644
RG CV GRCEC D + G C C C + C+ QC+
Sbjct: 384 RGRCVDGRCECDDGFT-GADCGEL-KCPNGCSGHGRCVNGQCV 424
Score = 47.0 bits (110), Expect = 7e-05
Identities = 47/149 (31%), Positives = 56/149 (37%), Gaps = 33/149 (22%)
Query: 517 QPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFS 576
+P CSGRG C C K G C + + CP GN C G C G+C C
Sbjct: 158 RPFCSGRGNFSTEGCGCVCEPGWK--GPNCSEPE--CP---GN-CHLRGRCIDGQCICDD 209
Query: 577 GWEGDRCQ---CPSAAAQH--CVNS--------KGQVCS----------GRGTCVCGRCE 613
G+ G+ C CPS CVN G CS GTCV G C
Sbjct: 210 GFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCSREICPVPCSEEHGTCVDGLCV 269
Query: 614 CTDPRSIGRFCEHCPTCYTACKENWNCMQ 642
C D + G C P C C C++
Sbjct: 270 CHDGFA-GDDCNK-PLCLNNCYNRGRCVE 296
Score = 40.0 bits (92), Expect = 0.008
Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 17/108 (15%)
Query: 561 CAGHGE--CEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPR 618
C+G G E C C GW+G C P C RG C+ G+C C D
Sbjct: 161 CSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGN---------CHLRGRCIDGQCICDDGF 211
Query: 619 SIGRFCEHCPTCYTACKENWNCMQ----CLHPHNLSQAILDQCKTSCA 662
+ G C C + C + C+ C + + + C C+
Sbjct: 212 T-GEDCSQL-ACPSDCNDQGKCVNGVCICFEGYAGADCSREICPVPCS 257
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 72.0 bits (175), Expect = 2e-12
Identities = 64/261 (24%), Positives = 78/261 (29%), Gaps = 70/261 (26%)
Query: 458 TAKIHIHRNCSCQCEDNRGPKGKCVDET------FLDSKCFQCDENKCHFDEDQFSSESC 511
T I NC C N G C+ T FL C + Q+ C
Sbjct: 557 TTAIESVDNCPSNCYGN----GDCISGTCHCFLGFLGPDCGRASCPVLCSGNGQYMKGRC 612
Query: 512 KSHK-------DQPV-------CSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHH 557
H D P CS G C+ G C C+ G+ CE+ D P
Sbjct: 613 LCHSGWKGAECDVPTNQCIDVACSNHGTCITGTCICNP----GYKGESCEEVDCMDP--- 665
Query: 558 GNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQV----------------- 600
C+G G C G C C GW G C+ P A + G
Sbjct: 666 --TCSGRGVCVRGECHCSVGWGGTNCETPRATCLDQCSGHGTFLPDTGLCSCDPSWTGHD 723
Query: 601 ---------CSGRGTCVCGRCEC--------TDPRSIGRFCEHCPTCYTA---CKENWNC 640
C G G CV G C C D R+ C TC C WN
Sbjct: 724 CSIEICAADCGGHGVCVGGTCRCEDGWMGAACDQRACHPRCAEHGTCRDGKCECSPGWNG 783
Query: 641 MQCLHPHNLSQAILDQCKTSC 661
C H L + + + C C
Sbjct: 784 EHCTIAHYLDRVVKEGCPGLC 804
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 71.2 bits (173), Expect = 3e-12
Identities = 65/243 (26%), Positives = 86/243 (35%), Gaps = 59/243 (24%)
Query: 458 TAKIHIHRNCSCQCEDNRGPKGKCVD------ETFLDSKCFQ------CDEN----KCH- 500
T I I +CS C N G+C+ FL C + C N K H
Sbjct: 523 TTAIEIMDDCSTNCNGN----GECISGHCHCFPGFLGPDCARDSCPVLCGGNGEYEKGHC 578
Query: 501 FDEDQFSSESCKSHKDQ---PVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHH 557
+ C ++Q P C G G C+ G C C + G+ CE++D P
Sbjct: 579 VCRHGWKGPECDVPEEQCIDPTCFGHGTCIMGVCIC----VPGYKGEICEEEDCLDP--- 631
Query: 558 GNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCV--CGRCECT 615
+C+ HG C G C C +GW G C+ P Q + CSG GT + G C C
Sbjct: 632 --MCSNHGICVKGECHCSTGWGGVNCETPLPVCQ-------EQCSGHGTFLLDAGVCSC- 681
Query: 616 DPRSIGRFCEH------------CPTCYTACKENWNCMQC----LHPHNLSQAILDQCKT 659
DP+ G C C C+E W C H H K
Sbjct: 682 DPKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPTCEERSCHSHCTEHGQCKDGKC 741
Query: 660 SCA 662
C+
Sbjct: 742 ECS 744
Score = 59.3 bits (142), Expect = 1e-08
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 492 FQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDF 551
F D C D +++ C + C GVC G C C + +G CE+
Sbjct: 672 FLLDAGVCSCDP-KWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPT----CEER-- 724
Query: 552 SCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCP---SAAAQHCVNSKGQVCSGRGTC 607
SC H C HG+C+ G+C+C GWEGD C A C +C G G C
Sbjct: 725 SCHSH----CTEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPG----LCFGNGRC 775
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 71.2 bits (173), Expect = 3e-12
Identities = 65/243 (26%), Positives = 86/243 (35%), Gaps = 59/243 (24%)
Query: 458 TAKIHIHRNCSCQCEDNRGPKGKCVD------ETFLDSKCFQ------CDEN----KCH- 500
T I I +CS C N G+C+ FL C + C N K H
Sbjct: 522 TTAIEIMDDCSTNCNGN----GECISGHCHCFPGFLGPDCARDSCPVLCGGNGEYEKGHC 577
Query: 501 FDEDQFSSESCKSHKDQ---PVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHH 557
+ C ++Q P C G G C+ G C C + G+ CE++D P
Sbjct: 578 VCRHGWKGPECDVPEEQCIDPTCFGHGTCIMGVCIC----VPGYKGEICEEEDCLDP--- 630
Query: 558 GNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCV--CGRCECT 615
+C+ HG C G C C +GW G C+ P Q + CSG GT + G C C
Sbjct: 631 --MCSNHGICVKGECHCSTGWGGVNCETPLPVCQ-------EQCSGHGTFLLDAGVCSC- 680
Query: 616 DPRSIGRFCEH------------CPTCYTACKENWNCMQC----LHPHNLSQAILDQCKT 659
DP+ G C C C+E W C H H K
Sbjct: 681 DPKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPTCEERSCHSHCTEHGQCKDGKC 740
Query: 660 SCA 662
C+
Sbjct: 741 ECS 743
Score = 59.3 bits (142), Expect = 1e-08
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 492 FQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDF 551
F D C D +++ C + C GVC G C C + +G CE+
Sbjct: 671 FLLDAGVCSCDP-KWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPT----CEER-- 723
Query: 552 SCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCP---SAAAQHCVNSKGQVCSGRGTC 607
SC H C HG+C+ G+C+C GWEGD C A C +C G G C
Sbjct: 724 SCHSH----CTEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPG----LCFGNGRC 774
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 71.2 bits (173), Expect = 3e-12
Identities = 65/243 (26%), Positives = 86/243 (35%), Gaps = 59/243 (24%)
Query: 458 TAKIHIHRNCSCQCEDNRGPKGKCVD------ETFLDSKCFQ------CDEN----KCH- 500
T I I +CS C N G+C+ FL C + C N K H
Sbjct: 523 TTAIEIMDDCSTNCNGN----GECISGHCHCFPGFLGPDCARDSCPVLCGGNGEYEKGHC 578
Query: 501 FDEDQFSSESCKSHKDQ---PVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHH 557
+ C ++Q P C G G C+ G C C + G+ CE++D P
Sbjct: 579 VCRHGWKGPECDVPEEQCIDPTCFGHGTCIMGVCIC----VPGYKGEICEEEDCLDP--- 631
Query: 558 GNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCV--CGRCECT 615
+C+ HG C G C C +GW G C+ P Q + CSG GT + G C C
Sbjct: 632 --MCSNHGICVKGECHCSTGWGGVNCETPLPVCQ-------EQCSGHGTFLLDAGVCSC- 681
Query: 616 DPRSIGRFCEH------------CPTCYTACKENWNCMQC----LHPHNLSQAILDQCKT 659
DP+ G C C C+E W C H H K
Sbjct: 682 DPKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPTCEERSCHSHCTEHGQCKDGKC 741
Query: 660 SCA 662
C+
Sbjct: 742 ECS 744
Score = 59.3 bits (142), Expect = 1e-08
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 492 FQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDF 551
F D C D +++ C + C GVC G C C + +G CE+
Sbjct: 672 FLLDAGVCSCDP-KWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPT----CEER-- 724
Query: 552 SCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCP---SAAAQHCVNSKGQVCSGRGTC 607
SC H C HG+C+ G+C+C GWEGD C A C +C G G C
Sbjct: 725 SCHSH----CTEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPG----LCFGNGRC 775
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 67.4 bits (163), Expect = 5e-11
Identities = 50/179 (27%), Positives = 70/179 (39%), Gaps = 38/179 (21%)
Query: 493 QCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYG-KYCEKDDF 551
+C+ +C ++ C + C GRG CV G+C C+ G+ G + C D
Sbjct: 475 RCESGRC-MCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGFTGEDCGSRRCPGD-- 531
Query: 552 SCPYHHGNLCAGHGECEAGRCQCFSGWEGDRC---QCPSAAAQHCVNSKGQVCSGRGTCV 608
C GHG CE G C C +G+ G+ C CP C GRG C+
Sbjct: 532 ---------CRGHGLCEDGVCVCDAGYSGEDCSTRSCPGG------------CRGRGQCL 570
Query: 609 CGRCECTDPRSIGRFC--EHCPTCYTACKENWNCMQ----CLHPHNLSQAILDQCKTSC 661
GRC C D S G C CP C ++ C C + + C ++C
Sbjct: 571 DGRCVCEDGYS-GEDCGVRQCP---NDCSQHGVCQDGVCICWEGYVSEDCSIRTCPSNC 625
Score = 66.2 bits (160), Expect = 1e-10
Identities = 59/198 (29%), Positives = 73/198 (36%), Gaps = 48/198 (24%)
Query: 466 NCSCQCEDNRGPKGKCVDETFLDSKCFQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGV 525
+ S C D+ +G+CV + CF ++ SC C GRG
Sbjct: 182 SASGSCPDDCNDQGRCVRGRCV---CFP-----------GYTGPSCGWPSCPGDCQGRGR 227
Query: 526 CVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRC-- 583
CV G C C G C + SCP C+ G CE GRC C G+ GD C
Sbjct: 228 CVQGVCVCR----AGFSGPDCSQR--SCPRG----CSQRGRCEGGRCVCDPGYTGDDCGM 277
Query: 584 -QCPSAAAQ-------HCVNSKGQV------------CSGRGTCVCGRCECTDPRSIGRF 623
CP +Q CV + G CS RG C GRC C DP G
Sbjct: 278 RSCPRGCSQRGRCENGRCVCNPGYTGEDCGVRSCPRGCSQRGRCKDGRCVC-DPGYTGED 336
Query: 624 CEHCPTCYTACKENWNCM 641
C +C C E C+
Sbjct: 337 C-GTRSCPWDCGEGGRCV 353
Score = 65.9 bits (159), Expect = 1e-10
Identities = 55/184 (29%), Positives = 67/184 (36%), Gaps = 45/184 (24%)
Query: 465 RNCSCQCEDN-RGPKGKCVDETFLDSKCFQCDENKCHFDEDQ--------------FSSE 509
R C C R G+C+ +T C C D +Q ++
Sbjct: 371 RTCPRDCRGRGRCEDGECICDTGYSGD--DCGVRSCPGDCNQRGRCEDGRCVCWPGYTGT 428
Query: 510 SCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEA 569
C S C GRG C G C C+ G+ G SCP C G G CE+
Sbjct: 429 DCGSRACPRDCRGRGRCENGVCVCNAGYSGEDCGVR------SCPGD----CRGRGRCES 478
Query: 570 GRCQCFSGWEGDRC---QCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFC-- 624
GRC C+ G+ G C CP C GRG CV GRC C +P G C
Sbjct: 479 GRCMCWPGYTGRDCGTRACPGD------------CRGRGRCVDGRCVC-NPGFTGEDCGS 525
Query: 625 EHCP 628
CP
Sbjct: 526 RRCP 529
Score = 63.2 bits (152), Expect = 9e-10
Identities = 46/138 (33%), Positives = 59/138 (42%), Gaps = 17/138 (12%)
Query: 493 QCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFS 552
+C+E +C D ++ +C + C GRG CV G C CH G+ G+ E +
Sbjct: 630 RCEEGRCLCDPG-YTGPTCATRMCPADCRGRGRCVQGVCLCHVGYGGEDCGQE-EPPASA 687
Query: 553 CPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRC 612
CP C C AG+C C G+ G P A Q C C GRG C G C
Sbjct: 688 CP----GGCGPRELCRAGQCVCVEGFRG-----PDCAIQTCPGD----CRGRGECHDGSC 734
Query: 613 ECTDPRSIGRFC-EHCPT 629
C D + G C E PT
Sbjct: 735 VCKDGYA-GEDCGEEVPT 751
Score = 62.4 bits (150), Expect = 2e-09
Identities = 43/127 (33%), Positives = 53/127 (41%), Gaps = 30/127 (23%)
Query: 493 QCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDF- 551
QC + +C ED +S E C + CS GVC G C C + Y +D
Sbjct: 568 QCLDGRC-VCEDGYSGEDCGVRQCPNDCSQHGVCQDGVCIC--------WEGYVSEDCSI 618
Query: 552 -SCPYHHGNLCAGHGECEAGRCQCFSGWEGDRC---QCPSAAAQHCVNSKGQVCSGRGTC 607
+CP + C G G CE GRC C G+ G C CP+ C GRG C
Sbjct: 619 RTCPSN----CHGRGRCEEGRCLCDPGYTGPTCATRMCPAD------------CRGRGRC 662
Query: 608 VCGRCEC 614
V G C C
Sbjct: 663 VQGVCLC 669
Score = 56.2 bits (134), Expect = 1e-07
Identities = 43/151 (28%), Positives = 58/151 (38%), Gaps = 28/151 (18%)
Query: 493 QCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFS 552
+C+ +C + ++ E C CS RG C G+C C G+ G S
Sbjct: 289 RCENGRCVCNPG-YTGEDCGVRSCPRGCSQRGRCKDGRCVCDPGYTGEDCGTR------S 341
Query: 553 CPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQ---CPSAAAQHCVNSKGQVCSGRGTCVC 609
CP+ C G C GRC C+ G+ G+ C CP + C GRG C
Sbjct: 342 CPWD----CGEGGRCVDGRCVCWPGYTGEDCSTRTCP------------RDCRGRGRCED 385
Query: 610 GRCECTDPRSIGRFCEHCPTCYTACKENWNC 640
G C C D G C +C C + C
Sbjct: 386 GECIC-DTGYSGDDC-GVRSCPGDCNQRGRC 414
Score = 54.7 bits (130), Expect = 3e-07
Identities = 43/152 (28%), Positives = 53/152 (34%), Gaps = 22/152 (14%)
Query: 469 CQCEDNRGPKGKCVDETFLDSKCFQ---CDENKCHFDEDQFSSESCKSHKDQPVCSGRGV 525
C CED G G+ + C Q C + C E + SE C C GRG
Sbjct: 574 CVCED--GYSGEDCGVRQCPNDCSQHGVCQDGVCICWEG-YVSEDCSIRTCPSNCHGRGR 630
Query: 526 CVCGKCSCHKIKLGKVYG-KYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQ 584
C G+C C G + C D C G G C G C C G+ G+ C
Sbjct: 631 CEEGRCLCDPGYTGPTCATRMCPAD-----------CRGRGRCVQGVCLCHVGYGGEDCG 679
Query: 585 CPSAAAQHCVNSKGQVCSGRGTCVCGRCECTD 616
A C C R C G+C C +
Sbjct: 680 QEEPPASACPGG----CGPRELCRAGQCVCVE 707
Score = 45.4 bits (106), Expect = 2e-04
Identities = 36/131 (27%), Positives = 50/131 (38%), Gaps = 10/131 (7%)
Query: 560 LCAGHGECEAGRCQCFS--GWEGDRC------QCPSAAAQHCVNSKGQVCSGRGTCVCGR 611
LC+ HG + RC C GW G C + P ++ S C+ +G CV GR
Sbjct: 142 LCSLHGVFDLSRCTCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDDCNDQGRCVRGR 201
Query: 612 CECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQAILDQCKTSCALMEQQHYVD 671
C C P G C P+C C+ C+Q + + D + SC Q
Sbjct: 202 CVCF-PGYTGPSC-GWPSCPGDCQGRGRCVQGVCVCRAGFSGPDCSQRSCPRGCSQRGRC 259
Query: 672 QTSECFSSPSY 682
+ C P Y
Sbjct: 260 EGGRCVCDPGY 270
>gi|62988324 tenascin N [Homo sapiens]
Length = 1299
Score = 67.4 bits (163), Expect = 5e-11
Identities = 52/189 (27%), Positives = 74/189 (39%), Gaps = 42/189 (22%)
Query: 437 KKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQ-CEDNRGPKGKCVDETFLDSKC---- 491
K C++ G + + + E + + CS Q C C T L C
Sbjct: 97 KDCELAGSVQDLLAR-VKKLEEEMVEMKEQCSAQRC---------CQGVTDLSRHCSGHG 146
Query: 492 -FQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDD 550
F + CH +E + +C+ CSG G CV G+C CH+ +G G
Sbjct: 147 TFSLETCSCHCEEGR-EGPACERLACPGACSGHGRCVDGRCLCHEPYVGADCGYP----- 200
Query: 551 FSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRC---QCPSAAAQHCVNSKGQVCSGRGTC 607
+CP + C+GHGEC G CQC + + C +CP CSG G C
Sbjct: 201 -ACPEN----CSGHGECVRGVCQCHEDFMSEDCSEKRCPGD------------CSGHGFC 243
Query: 608 VCGRCECTD 616
G C C +
Sbjct: 244 DTGECYCEE 252
Score = 62.0 bits (149), Expect = 2e-09
Identities = 46/144 (31%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 520 CSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWE 579
CSG G CSCH + G+ G CE+ +CP C+GHG C GRC C +
Sbjct: 142 CSGHGTFSLETCSCH-CEEGRE-GPACER--LACP----GACSGHGRCVDGRCLCHEPYV 193
Query: 580 GDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRC---------ECTDPRSIGRFCEH--CP 628
G C P+ + CSG G CV G C +C++ R G H C
Sbjct: 194 GADCGYPACP---------ENCSGHGECVRGVCQCHEDFMSEDCSEKRCPGDCSGHGFCD 244
Query: 629 TCYTACKENW---NCMQCLHPHNL 649
T C+E + +C Q + P L
Sbjct: 245 TGECYCEEGFTGLDCAQVVTPQGL 268
>gi|33598931 scavenger receptor class F, member 1 isoform 3
precursor [Homo sapiens]
Length = 569
Score = 65.5 bits (158), Expect = 2e-10
Identities = 64/245 (26%), Positives = 86/245 (35%), Gaps = 75/245 (30%)
Query: 457 ETAKIHIHRNC-----SCQCEDNR-----------GPKGKCVDETFLDSKCFQCDENKCH 500
E+ H H C +CQC+ +R GP G+C T + CH
Sbjct: 101 ESCPCHPHGQCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGV-----------CH 149
Query: 501 FDEDQFSS---ESCKSHKDQPVCS-GRGVCVCG----------KCSCHKIKLGKVYGKYC 546
+ +SS C+ + C G CVC +C+CH G C
Sbjct: 150 CEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNCH--------GSPC 201
Query: 547 EKDDFSC---PYHHGNLCAGHGECEAGRCQ-------CFSGWEGDRCQCPSAAAQHCVNS 596
E+D C P G C EC GRC C G+ G RC+ P A H
Sbjct: 202 EQDSGRCACRPGWWGPECQQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH---- 257
Query: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQAILDQ 656
G C+ CGRC+ +P C +C+ WN QC P L +
Sbjct: 258 -GVQCAHS----CGRCKHNEP------CSPDTGSCESCEPGWNGTQCQQP-CLPGTFGES 305
Query: 657 CKTSC 661
C+ C
Sbjct: 306 CEQQC 310
Score = 48.9 bits (115), Expect = 2e-05
Identities = 57/202 (28%), Positives = 77/202 (38%), Gaps = 40/202 (19%)
Query: 465 RNCSCQCEDNRGPK--GKCVDET-FLDSKC-FQCDENKCHFDEDQFSSESCKSHKDQ--P 518
R C C R + G CV + + +C F+C+ CH + S C P
Sbjct: 161 RPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCN---CHGSPCEQDSGRCACRPGWWGP 217
Query: 519 VCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPY-HHGNLCAGH-GEC--------E 568
C + CV G+CS + G + + CP HG CA G C +
Sbjct: 218 ECQQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPD 277
Query: 569 AGRCQ-CFSGWEGDRCQCP-------SAAAQHCVNSK-GQVCSGRGTCVCGRCE------ 613
G C+ C GW G +CQ P + Q C + + G+ C T C RC+
Sbjct: 278 TGSCESCEPGWNGTQCQQPCLPGTFGESCEQQCPHCRHGEACEP-DTGHCQRCDPGWLGP 336
Query: 614 -CTDPRSIGRFCEH----CPTC 630
C DP G F E CPTC
Sbjct: 337 RCEDPCPTGTFGEDCGSTCPTC 358
Score = 31.6 bits (70), Expect = 2.9
Identities = 48/161 (29%), Positives = 61/161 (37%), Gaps = 41/161 (25%)
Query: 471 CEDNRGPKGKCVDETFLDSKCFQCDENKCH---FDEDQFSSESCKSHKDQPVCSGRGVC- 526
CE + G +C D +L +C E+ C F ED +C P C +G C
Sbjct: 319 CEPDTGHCQRC-DPGWLGPRC----EDPCPTGTFGED--CGSTC------PTCV-QGSCD 364
Query: 527 -VCGKCSCHKIKLGKVYGKYCEKDDFSCPY-HHGNLCAGHGECEAGRCQCFSGWEGDRCQ 584
V G C C +G C SCP HGN C+ EC G C SG CQ
Sbjct: 365 TVTGDCVCS----AGYWGPSCNA---SCPAGFHGNNCSVPCECPEGLCHPVSG----SCQ 413
Query: 585 CPSAAAQHCVNSKGQVCS------GRGTCVCGRCECTDPRS 619
P + ++ G + G C C C C PRS
Sbjct: 414 -PGSGSRDTALIAGSLVPLLLLFLGLACCAC--C-CWAPRS 450
>gi|33598929 scavenger receptor class F, member 1 isoform 1
precursor [Homo sapiens]
Length = 830
Score = 65.5 bits (158), Expect = 2e-10
Identities = 64/245 (26%), Positives = 86/245 (35%), Gaps = 75/245 (30%)
Query: 457 ETAKIHIHRNC-----SCQCEDNR-----------GPKGKCVDETFLDSKCFQCDENKCH 500
E+ H H C +CQC+ +R GP G+C T + CH
Sbjct: 101 ESCPCHPHGQCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGV-----------CH 149
Query: 501 FDEDQFSS---ESCKSHKDQPVCS-GRGVCVCG----------KCSCHKIKLGKVYGKYC 546
+ +SS C+ + C G CVC +C+CH G C
Sbjct: 150 CEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNCH--------GSPC 201
Query: 547 EKDDFSC---PYHHGNLCAGHGECEAGRCQ-------CFSGWEGDRCQCPSAAAQHCVNS 596
E+D C P G C EC GRC C G+ G RC+ P A H
Sbjct: 202 EQDSGRCACRPGWWGPECQQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH---- 257
Query: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQAILDQ 656
G C+ CGRC+ +P C +C+ WN QC P L +
Sbjct: 258 -GVQCAHS----CGRCKHNEP------CSPDTGSCESCEPGWNGTQCQQP-CLPGTFGES 305
Query: 657 CKTSC 661
C+ C
Sbjct: 306 CEQQC 310
Score = 48.9 bits (115), Expect = 2e-05
Identities = 57/202 (28%), Positives = 77/202 (38%), Gaps = 40/202 (19%)
Query: 465 RNCSCQCEDNRGPK--GKCVDET-FLDSKC-FQCDENKCHFDEDQFSSESCKSHKDQ--P 518
R C C R + G CV + + +C F+C+ CH + S C P
Sbjct: 161 RPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCN---CHGSPCEQDSGRCACRPGWWGP 217
Query: 519 VCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPY-HHGNLCAGH-GEC--------E 568
C + CV G+CS + G + + CP HG CA G C +
Sbjct: 218 ECQQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPD 277
Query: 569 AGRCQ-CFSGWEGDRCQCP-------SAAAQHCVNSK-GQVCSGRGTCVCGRCE------ 613
G C+ C GW G +CQ P + Q C + + G+ C T C RC+
Sbjct: 278 TGSCESCEPGWNGTQCQQPCLPGTFGESCEQQCPHCRHGEACEP-DTGHCQRCDPGWLGP 336
Query: 614 -CTDPRSIGRFCEH----CPTC 630
C DP G F E CPTC
Sbjct: 337 RCEDPCPTGTFGEDCGSTCPTC 358
Score = 31.6 bits (70), Expect = 2.9
Identities = 48/161 (29%), Positives = 61/161 (37%), Gaps = 41/161 (25%)
Query: 471 CEDNRGPKGKCVDETFLDSKCFQCDENKCH---FDEDQFSSESCKSHKDQPVCSGRGVC- 526
CE + G +C D +L +C E+ C F ED +C P C +G C
Sbjct: 319 CEPDTGHCQRC-DPGWLGPRC----EDPCPTGTFGED--CGSTC------PTCV-QGSCD 364
Query: 527 -VCGKCSCHKIKLGKVYGKYCEKDDFSCPY-HHGNLCAGHGECEAGRCQCFSGWEGDRCQ 584
V G C C +G C SCP HGN C+ EC G C SG CQ
Sbjct: 365 TVTGDCVCS----AGYWGPSCNA---SCPAGFHGNNCSVPCECPEGLCHPVSG----SCQ 413
Query: 585 CPSAAAQHCVNSKGQVCS------GRGTCVCGRCECTDPRS 619
P + ++ G + G C C C C PRS
Sbjct: 414 -PGSGSRDTALIAGSLVPLLLLFLGLACCAC--C-CWAPRS 450
>gi|145309306 scavenger receptor class F, member 1 isoform 5
precursor [Homo sapiens]
Length = 744
Score = 65.5 bits (158), Expect = 2e-10
Identities = 64/245 (26%), Positives = 86/245 (35%), Gaps = 75/245 (30%)
Query: 457 ETAKIHIHRNC-----SCQCEDNR-----------GPKGKCVDETFLDSKCFQCDENKCH 500
E+ H H C +CQC+ +R GP G+C T + CH
Sbjct: 101 ESCPCHPHGQCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGV-----------CH 149
Query: 501 FDEDQFSS---ESCKSHKDQPVCS-GRGVCVCG----------KCSCHKIKLGKVYGKYC 546
+ +SS C+ + C G CVC +C+CH G C
Sbjct: 150 CEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNCH--------GSPC 201
Query: 547 EKDDFSC---PYHHGNLCAGHGECEAGRCQ-------CFSGWEGDRCQCPSAAAQHCVNS 596
E+D C P G C EC GRC C G+ G RC+ P A H
Sbjct: 202 EQDSGRCACRPGWWGPECQQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSH---- 257
Query: 597 KGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQAILDQ 656
G C+ CGRC+ +P C +C+ WN QC P L +
Sbjct: 258 -GVQCAHS----CGRCKHNEP------CSPDTGSCESCEPGWNGTQCQQP-CLPGTFGES 305
Query: 657 CKTSC 661
C+ C
Sbjct: 306 CEQQC 310
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,569,657
Number of Sequences: 37866
Number of extensions: 1523193
Number of successful extensions: 5109
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 3745
Number of HSP's gapped (non-prelim): 895
length of query: 769
length of database: 18,247,518
effective HSP length: 110
effective length of query: 659
effective length of database: 14,082,258
effective search space: 9280208022
effective search space used: 9280208022
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.