Search of human proteins with 4503893

Search of human proteins with 4503893

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4503893 beta-1,4-N-acetyl-galactosaminyl transferase 1 [Homo
sapiens]
         (533 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4503893 beta-1,4-N-acetyl-galactosaminyl transferase 1 [Homo ...  1070   0.0  
gi|227498224 beta-1,4-N-acetyl-galactosaminyl transferase 2 isof...   368   e-102
gi|227497754 beta-1,4-N-acetyl-galactosaminyl transferase 2 isof...   368   e-102
gi|227497758 beta-1,4-N-acetyl-galactosaminyl transferase 2 isof...   368   e-102
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         40   0.004
gi|4504725 interferon regulatory factor 3 [Homo sapiens]               35   0.17 
gi|239750208 PREDICTED: hypothetical protein [Homo sapiens]            33   0.50 
gi|239744514 PREDICTED: hypothetical protein [Homo sapiens]            33   0.50 
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    33   0.85 
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do...    33   0.85 
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          32   1.1  
gi|162329610 phosphodiesterase 4A isoform 2 [Homo sapiens]             32   1.1  
gi|156105673 methyl-CpG binding domain protein 1 isoform 3 [Homo...    32   1.5  
gi|178056552 non-SMC condensin I complex, subunit D2 [Homo sapiens]    32   1.5  
gi|172072597 retinoblastoma-like 2 (p130) [Homo sapiens]               32   1.9  
gi|7710143 methyl-CpG binding domain protein 1 isoform 4 [Homo s...    32   1.9  
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       32   1.9  
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    31   2.5  
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa...    31   3.2  
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa...    31   3.2  
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa...    31   3.2  
gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa...    31   3.2  
gi|112807221 N-acetylgalactosaminyltransferase 12 [Homo sapiens]       30   4.2  
gi|60460889 Myb protein P42POP [Homo sapiens]                          30   4.2  
gi|208609985 SH2 domain containing 3A [Homo sapiens]                   30   5.5  
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]           30   5.5  
gi|148664201 cytoskeleton associated protein 2 isoform 2 [Homo s...    30   5.5  
gi|148664244 cytoskeleton associated protein 2 isoform 1 [Homo s...    30   5.5  
gi|226246533 TOX high mobility group box family member 3 isoform...    30   7.2  
gi|226054295 TOX high mobility group box family member 3 isoform...    30   7.2  

>gi|4503893 beta-1,4-N-acetyl-galactosaminyl transferase 1 [Homo
           sapiens]
          Length = 533

 Score = 1070 bits (2767), Expect = 0.0
 Identities = 533/533 (100%), Positives = 533/533 (100%)

Query: 1   MWLGRRALCALVLLLACASLGLLYASTRDAPGLRLPLAPWAPPQSPRRPELPDLAPEPRY 60
           MWLGRRALCALVLLLACASLGLLYASTRDAPGLRLPLAPWAPPQSPRRPELPDLAPEPRY
Sbjct: 1   MWLGRRALCALVLLLACASLGLLYASTRDAPGLRLPLAPWAPPQSPRRPELPDLAPEPRY 60

Query: 61  AHIPVRIKEQVVGLLAWNNCSCESSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQ 120
           AHIPVRIKEQVVGLLAWNNCSCESSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQ
Sbjct: 61  AHIPVRIKEQVVGLLAWNNCSCESSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQ 120

Query: 121 EFQAFLSRSQSPADQLLIAPANSPLQYPLQGVEVQPLRSILVPGLSLQAASGQEVYQVNL 180
           EFQAFLSRSQSPADQLLIAPANSPLQYPLQGVEVQPLRSILVPGLSLQAASGQEVYQVNL
Sbjct: 121 EFQAFLSRSQSPADQLLIAPANSPLQYPLQGVEVQPLRSILVPGLSLQAASGQEVYQVNL 180

Query: 181 TASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNRQLQLVTYSSRSYQTNTADTVRF 240
           TASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNRQLQLVTYSSRSYQTNTADTVRF
Sbjct: 181 TASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNRQLQLVTYSSRSYQTNTADTVRF 240

Query: 241 STEGHEAAFTIRIRHPPNPRLYPPGSLPQGAQYNISALVTIATKTFLRYDRLRALITSIR 300
           STEGHEAAFTIRIRHPPNPRLYPPGSLPQGAQYNISALVTIATKTFLRYDRLRALITSIR
Sbjct: 241 STEGHEAAFTIRIRHPPNPRLYPPGSLPQGAQYNISALVTIATKTFLRYDRLRALITSIR 300

Query: 301 RFYPTVTVVIADDSDKPERVSGPYVEHYLMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFV 360
           RFYPTVTVVIADDSDKPERVSGPYVEHYLMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFV
Sbjct: 301 RFYPTVTVVIADDSDKPERVSGPYVEHYLMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFV 360

Query: 361 FTARTRLERLVDVLERTPLDLVGGAVREISGFATTYRQLLSVEPGAPGLGNCLRQRRGFH 420
           FTARTRLERLVDVLERTPLDLVGGAVREISGFATTYRQLLSVEPGAPGLGNCLRQRRGFH
Sbjct: 361 FTARTRLERLVDVLERTPLDLVGGAVREISGFATTYRQLLSVEPGAPGLGNCLRQRRGFH 420

Query: 421 HELVGFPGCVVTDGVVNFFLARTDKVREVGFDPRLSRVAHLEFFLDGLGSLRVGSCSDVV 480
           HELVGFPGCVVTDGVVNFFLARTDKVREVGFDPRLSRVAHLEFFLDGLGSLRVGSCSDVV
Sbjct: 421 HELVGFPGCVVTDGVVNFFLARTDKVREVGFDPRLSRVAHLEFFLDGLGSLRVGSCSDVV 480

Query: 481 VDHASKLKLPWTSRDAGAETYARYRYPGSLDESQMAKHRLLFFKHRLQCMTSQ 533
           VDHASKLKLPWTSRDAGAETYARYRYPGSLDESQMAKHRLLFFKHRLQCMTSQ
Sbjct: 481 VDHASKLKLPWTSRDAGAETYARYRYPGSLDESQMAKHRLLFFKHRLQCMTSQ 533


>gi|227498224 beta-1,4-N-acetyl-galactosaminyl transferase 2 isoform
           b [Homo sapiens]
          Length = 506

 Score =  368 bits (945), Expect = e-102
 Identities = 223/529 (42%), Positives = 297/529 (56%), Gaps = 33/529 (6%)

Query: 1   MWLGRRALCALVLLLACASLGLLYASTRDAPGLRLPLAPWAPPQSPRRPELPDLAPEPRY 60
           +WL    L  LV++L    +G ++ S         P  P  P  +P   +L  L PE R 
Sbjct: 9   LWL----LKILVIILVLGIVGFMFGSMFLQAVFSSP-KPELPSPAPGVQKLK-LLPEERL 62

Query: 61  AHIPVRIKEQVVGLLAWNNCSCESSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQ 120
            ++        + L   N C CE++         K+    +   A+  ++L A  A R+ 
Sbjct: 63  RNL---FSYDGIWLFPKNQCKCEAN---------KEQGGYNFQDAYGQSDLPAVKARRQA 110

Query: 121 EFQAFLSRSQSPADQLLIAPANSPLQYPLQGVEVQPLRSILVPGLSLQAASGQEVYQVNL 180
           EF+ F  R   P    L+   N P  YP+ GVEV PL ++ +PGL  +      VY+V L
Sbjct: 111 EFEHFQRREGLPRPLPLLVQPNLPFGYPVHGVEVMPLHTVPIPGLQFEGPDAP-VYEVTL 169

Query: 181 TASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNRQLQLVTYSSRSYQTNTADTVRF 240
           TASLGT +   +V    + G GQ  L + +     L   LQ VTY+S  YQ    D V  
Sbjct: 170 TASLGTLNTLADVPDSVVQGRGQKQLIISTSDRKLLKFILQHVTYTSTGYQHQKVDIVSL 229

Query: 241 STEGHEAAFTIRIRHPPNPRLYPPGSLPQGAQYNISALVTIATKTFLRYDRLRALITSIR 300
            +    A F + IRHP  P+LY PG      +  +  LVTIATKTFLR  +L  ++ SIR
Sbjct: 230 ESRSSVAKFPVTIRHPVIPKLYDPGP-----ERKLRNLVTIATKTFLRPHKLMIMLRSIR 284

Query: 301 RFYPTVTVVIADDSDKPERVSGPYVEHYLMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFV 360
            +YP +TV++ADDS KP  +   +VE+Y MPFGKGWFAGRNLA+SQVTTKYVLWVDDDF+
Sbjct: 285 EYYPDLTVIVADDSQKPLEIKDNHVEYYTMPFGKGWFAGRNLAISQVTTKYVLWVDDDFL 344

Query: 361 FTARTRLERLVDVLERTPLDLVGGAVREISGFATTYRQLLSVEPGAPGLGNCLRQRRGFH 420
           F   T++E LVDVLE+T LD+VGG+V    G    ++ LL         G CL +R GF 
Sbjct: 345 FNEETKIEVLVDVLEKTELDVVGGSV---LGNVFQFKLLLEQSEN----GACLHKRMGFF 397

Query: 421 HELVGFPGCVVTDGVVNFFLARTDKVREVGFDPRLSRVAHLEFFLDGLGSLRVGSCSDVV 480
             L GFP CVVT GVVNFFLA T++++ VGFDPRL RVAH EFF+DGLG+L VGSC +V+
Sbjct: 398 QPLDGFPSCVVTSGVVNFFLAHTERLQRVGFDPRLQRVAHSEFFIDGLGTLLVGSCPEVI 457

Query: 481 VDHASKLKLPWTSRDAGAETYARYRYPGSLDESQMAKHRLLFFKHRLQC 529
           + H S+  +  +   A  +TY  YR   +L   Q  K  L +FK+ LQC
Sbjct: 458 IGHQSRSPVVDSELAALEKTYNTYR-SNTLTRVQF-KLALHYFKNHLQC 504


>gi|227497754 beta-1,4-N-acetyl-galactosaminyl transferase 2 isoform
           a [Homo sapiens]
          Length = 566

 Score =  368 bits (945), Expect = e-102
 Identities = 223/529 (42%), Positives = 297/529 (56%), Gaps = 33/529 (6%)

Query: 1   MWLGRRALCALVLLLACASLGLLYASTRDAPGLRLPLAPWAPPQSPRRPELPDLAPEPRY 60
           +WL    L  LV++L    +G ++ S         P  P  P  +P   +L  L PE R 
Sbjct: 69  LWL----LKILVIILVLGIVGFMFGSMFLQAVFSSP-KPELPSPAPGVQKLK-LLPEERL 122

Query: 61  AHIPVRIKEQVVGLLAWNNCSCESSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQ 120
            ++        + L   N C CE++         K+    +   A+  ++L A  A R+ 
Sbjct: 123 RNL---FSYDGIWLFPKNQCKCEAN---------KEQGGYNFQDAYGQSDLPAVKARRQA 170

Query: 121 EFQAFLSRSQSPADQLLIAPANSPLQYPLQGVEVQPLRSILVPGLSLQAASGQEVYQVNL 180
           EF+ F  R   P    L+   N P  YP+ GVEV PL ++ +PGL  +      VY+V L
Sbjct: 171 EFEHFQRREGLPRPLPLLVQPNLPFGYPVHGVEVMPLHTVPIPGLQFEGPDAP-VYEVTL 229

Query: 181 TASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNRQLQLVTYSSRSYQTNTADTVRF 240
           TASLGT +   +V    + G GQ  L + +     L   LQ VTY+S  YQ    D V  
Sbjct: 230 TASLGTLNTLADVPDSVVQGRGQKQLIISTSDRKLLKFILQHVTYTSTGYQHQKVDIVSL 289

Query: 241 STEGHEAAFTIRIRHPPNPRLYPPGSLPQGAQYNISALVTIATKTFLRYDRLRALITSIR 300
            +    A F + IRHP  P+LY PG      +  +  LVTIATKTFLR  +L  ++ SIR
Sbjct: 290 ESRSSVAKFPVTIRHPVIPKLYDPGP-----ERKLRNLVTIATKTFLRPHKLMIMLRSIR 344

Query: 301 RFYPTVTVVIADDSDKPERVSGPYVEHYLMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFV 360
            +YP +TV++ADDS KP  +   +VE+Y MPFGKGWFAGRNLA+SQVTTKYVLWVDDDF+
Sbjct: 345 EYYPDLTVIVADDSQKPLEIKDNHVEYYTMPFGKGWFAGRNLAISQVTTKYVLWVDDDFL 404

Query: 361 FTARTRLERLVDVLERTPLDLVGGAVREISGFATTYRQLLSVEPGAPGLGNCLRQRRGFH 420
           F   T++E LVDVLE+T LD+VGG+V    G    ++ LL         G CL +R GF 
Sbjct: 405 FNEETKIEVLVDVLEKTELDVVGGSV---LGNVFQFKLLLEQSEN----GACLHKRMGFF 457

Query: 421 HELVGFPGCVVTDGVVNFFLARTDKVREVGFDPRLSRVAHLEFFLDGLGSLRVGSCSDVV 480
             L GFP CVVT GVVNFFLA T++++ VGFDPRL RVAH EFF+DGLG+L VGSC +V+
Sbjct: 458 QPLDGFPSCVVTSGVVNFFLAHTERLQRVGFDPRLQRVAHSEFFIDGLGTLLVGSCPEVI 517

Query: 481 VDHASKLKLPWTSRDAGAETYARYRYPGSLDESQMAKHRLLFFKHRLQC 529
           + H S+  +  +   A  +TY  YR   +L   Q  K  L +FK+ LQC
Sbjct: 518 IGHQSRSPVVDSELAALEKTYNTYR-SNTLTRVQF-KLALHYFKNHLQC 564


>gi|227497758 beta-1,4-N-acetyl-galactosaminyl transferase 2 isoform
           c [Homo sapiens]
          Length = 480

 Score =  368 bits (944), Expect = e-102
 Identities = 214/493 (43%), Positives = 286/493 (58%), Gaps = 34/493 (6%)

Query: 45  SPRRPELPDLAPEPRYAHIPVRIKEQVVGLLAW--------NNCSCESSGGGLPLPFQKQ 96
           S  +PELP  +P P    + +  +E++  L ++        N C CE++         K+
Sbjct: 12  SSPKPELP--SPAPGVQKLKLLPEERLRNLFSYDGIWLFPKNQCKCEAN---------KE 60

Query: 97  VRAIDLTKAFDPAELRAASATREQEFQAFLSRSQSPADQLLIAPANSPLQYPLQGVEVQP 156
               +   A+  ++L A  A R+ EF+ F  R   P    L+   N P  YP+ GVEV P
Sbjct: 61  QGGYNFQDAYGQSDLPAVKARRQAEFEHFQRREGLPRPLPLLVQPNLPFGYPVHGVEVMP 120

Query: 157 LRSILVPGLSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQL 216
           L ++ +PGL  +      VY+V LTASLGT +   +V    + G GQ  L + +     L
Sbjct: 121 LHTVPIPGLQFEGPDAP-VYEVTLTASLGTLNTLADVPDSVVQGRGQKQLIISTSDRKLL 179

Query: 217 NRQLQLVTYSSRSYQTNTADTVRFSTEGHEAAFTIRIRHPPNPRLYPPGSLPQGAQYNIS 276
              LQ VTY+S  YQ    D V   +    A F + IRHP  P+LY PG      +  + 
Sbjct: 180 KFILQHVTYTSTGYQHQKVDIVSLESRSSVAKFPVTIRHPVIPKLYDPGP-----ERKLR 234

Query: 277 ALVTIATKTFLRYDRLRALITSIRRFYPTVTVVIADDSDKPERVSGPYVEHYLMPFGKGW 336
            LVTIATKTFLR  +L  ++ SIR +YP +TV++ADDS KP  +   +VE+Y MPFGKGW
Sbjct: 235 NLVTIATKTFLRPHKLMIMLRSIREYYPDLTVIVADDSQKPLEIKDNHVEYYTMPFGKGW 294

Query: 337 FAGRNLAVSQVTTKYVLWVDDDFVFTARTRLERLVDVLERTPLDLVGGAVREISGFATTY 396
           FAGRNLA+SQVTTKYVLWVDDDF+F   T++E LVDVLE+T LD+VGG+V    G    +
Sbjct: 295 FAGRNLAISQVTTKYVLWVDDDFLFNEETKIEVLVDVLEKTELDVVGGSV---LGNVFQF 351

Query: 397 RQLLSVEPGAPGLGNCLRQRRGFHHELVGFPGCVVTDGVVNFFLARTDKVREVGFDPRLS 456
           + LL         G CL +R GF   L GFP CVVT GVVNFFLA T++++ VGFDPRL 
Sbjct: 352 KLLLEQSEN----GACLHKRMGFFQPLDGFPSCVVTSGVVNFFLAHTERLQRVGFDPRLQ 407

Query: 457 RVAHLEFFLDGLGSLRVGSCSDVVVDHASKLKLPWTSRDAGAETYARYRYPGSLDESQMA 516
           RVAH EFF+DGLG+L VGSC +V++ H S+  +  +   A  +TY  YR   +L   Q  
Sbjct: 408 RVAHSEFFIDGLGTLLVGSCPEVIIGHQSRSPVVDSELAALEKTYNTYR-SNTLTRVQF- 465

Query: 517 KHRLLFFKHRLQC 529
           K  L +FK+ LQC
Sbjct: 466 KLALHYFKNHLQC 478


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 19/174 (10%)

Query: 16   ACASLGLLYASTRDAPGLRLPLAPWAPPQ------SPRRP--ELPDLAPEPRYAHIPVRI 67
            A A   LL  ++  +  L  PLAP A PQ      SP  P   LP LAP P  A  PV  
Sbjct: 1566 APAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAA--PVLA 1623

Query: 68   KEQV-VGLLAWNNCSCESSGGGLPLPFQKQVRAIDLTKAFDPA----ELRAASATREQEF 122
              Q  V ++A ++    S     P+P    V A   T+   PA     L + ++T+    
Sbjct: 1624 SSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLAL 1683

Query: 123  QAFLSRS---QSPADQLLIAPANSPLQYPLQGVEVQPLRSIL-VPGLSLQAASG 172
               L+ +    SP+  L +   N    +P Q + + P  S++  P  +L  A G
Sbjct: 1684 APALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPG 1737


>gi|4504725 interferon regulatory factor 3 [Homo sapiens]
          Length = 427

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 126 LSRSQSPADQLLIAPA-NSPLQYPLQGVEVQPLRSILVPGLSLQAA-----SGQEVYQVN 179
           L+ +  P  Q L +P+ ++P  +P  G    PL+ +LVPG   +        G++V+Q  
Sbjct: 160 LAVAPEPCPQPLRSPSLDNPTPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQT 219

Query: 180 LTASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNR 218
           ++   G   V  EV   TL G     +TL  PG+   +R
Sbjct: 220 ISCPEGLRLVGSEVGDRTLPG---WPVTLPDPGMSLTDR 255


>gi|239750208 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 92

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 20 LGLLYASTRDAPGLRLPLAPWAPPQSPRRPE-LPDLAPEPRYAHIPVRIKEQVVGLLAWN 78
          LG+++A  R  PG R   APW P +  RRP+ +  + PEP  +    R ++ + G    N
Sbjct: 7  LGMVFAPPR--PGQRQAGAPWVPERRKRRPDGVSTVFPEPHVSTAQCRERQGLQG----N 60

Query: 79 NCSCESSGGGLP 90
            +   S G LP
Sbjct: 61 YQTHSLSPGSLP 72


>gi|239744514 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 92

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 20 LGLLYASTRDAPGLRLPLAPWAPPQSPRRPE-LPDLAPEPRYAHIPVRIKEQVVGLLAWN 78
          LG+++A  R  PG R   APW P +  RRP+ +  + PEP  +    R ++ + G    N
Sbjct: 7  LGMVFAPPR--PGQRQAGAPWVPERRKRRPDGVSTVFPEPHVSTAQCRERQGLQG----N 60

Query: 79 NCSCESSGGGLP 90
            +   S G LP
Sbjct: 61 YQTHSLSPGSLP 72


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 32.7 bits (73), Expect = 0.85
 Identities = 49/195 (25%), Positives = 64/195 (32%), Gaps = 26/195 (13%)

Query: 22  LLYASTRDAPGLRLPLAPWAPPQSPRRPELPDLAPEPRYAHIPVRIKEQVVGLLAWNNCS 81
           L+ A+    PG   P AP  PP  PR P  P  +P+P  A                    
Sbjct: 765 LMGAAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSA-------------------- 804

Query: 82  CESSGGGLPLPFQKQ-VRAIDLTKAFDPAELRAASATREQEFQAFLSRSQSPADQLLIAP 140
             S G GL  P  K      +    F P          E+E          P D     P
Sbjct: 805 VASPGSGLSSPGPKPGDSGYETETPFSPEGAFPGGGAAEEEGVPRPRAPPEPPDPGAPRP 864

Query: 141 ANSPLQYPLQGVEVQPLRSILVPGLSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLTG 200
              P   PL G   +P   + V    L  +  ++V + NL   LG        TG    G
Sbjct: 865 PPDPGPLPLPGPREKPTFVVQVSTEQLLMSLREDVTR-NL---LGEKGATARETGPRKAG 920

Query: 201 EGQADLTLVSPGLDQ 215
            G  +   V PGL++
Sbjct: 921 RGPGNREKV-PGLNR 934


>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
           domain 1 [Homo sapiens]
          Length = 1412

 Score = 32.7 bits (73), Expect = 0.85
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 3/34 (8%)

Query: 31  PGLRLPLAPWAPPQSPRRPELPDLAPEPRYAHIP 64
           P +R P APW  PQ PR  + P+ AP P  +HIP
Sbjct: 104 PWMRGP-APWPGPQPPRATQQPNQAPPP--SHIP 134


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 30  APGLRLPLAPWAPPQSPRRPELPDLAPEPRYAHIPVRIKEQVVGLLAWNNCSCES-SGGG 88
           APG RL L  WA P  P  P    L+P+P+    P   +  ++   +W     E  +GGG
Sbjct: 107 APGRRLSL--WAVPPGP--PLSGGLSPDPKPGGAPTSSRRPLLSSPSWGGPEPEGRAGGG 162

Query: 89  LP 90
           +P
Sbjct: 163 IP 164


>gi|162329610 phosphodiesterase 4A isoform 2 [Homo sapiens]
          Length = 860

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 16/116 (13%)

Query: 26  STRDAPGLRLPLAPWAPPQSPRRPELPD------LAPEPRYAHIPVRIKE-QVVGLLAWN 78
           +  D   L  PLAP    ++PRRP  P        +P P +      ++  Q +G  AW 
Sbjct: 23  AAEDEAFLPEPLAP----RAPRRPRSPPSSPVFFASPSPTFRRRLRLLRSCQDLGRQAWA 78

Query: 79  NCSCESSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQEFQAFLSRSQSPAD 134
               E+  G  P P +       L     P  +  A A   Q  ++FL RS S  D
Sbjct: 79  GAGFEAENGPTPSPGRS-----PLDSQASPGLVLHAGAATSQRRESFLYRSDSDYD 129


>gi|156105673 methyl-CpG binding domain protein 1 isoform 3 [Homo
           sapiens]
          Length = 549

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 19/172 (11%)

Query: 26  STRDAPGLRLPLAPWAPPQSPR--RPELPDLAPEPRYAHIPVRIKEQVVGLLAWNNCSCE 83
           + R  PG + PL P  P QSP    P    LAP P    I   + E  +  L  +  S  
Sbjct: 279 AARRRPGAQ-PLPPPPPSQSPEPTEPHPRALAPSPPAEFIYYCVDEDELKRLLPSVWSES 337

Query: 84  SSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQEFQAFLSRSQSPADQ-----LLI 138
             G G P P++++ R     +      L+   ATR     A    +Q+P  Q      ++
Sbjct: 338 EDGAGSPPPYRRRKRPSSARRHHLGPTLKPTLATR----TAQPDHTQAPTKQEAGGGFVL 393

Query: 139 APANSPLQYPLQGVEVQPLRSILVPGLSLQAASGQEVYQVNLTASLGTWDVA 190
            P  + L +  +G        + VPG    AAS + + Q    + L +W VA
Sbjct: 394 PPPGTDLVFLREGAS----SPVQVPG--PVAASTEALLQEAQCSGL-SWVVA 438


>gi|178056552 non-SMC condensin I complex, subunit D2 [Homo sapiens]
          Length = 1401

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 21/70 (30%), Positives = 32/70 (45%)

Query: 71  VVGLLAWNNCSCESSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQEFQAFLSRSQ 130
           +   LA N  SC+ S   L  P QK+ + +   +A       +A    E+E++A L   +
Sbjct: 428 LASFLANNPFSCKLSDADLAGPLQKETQKLQEMRAQRRTAAASAVLDPEEEWEAMLPELK 487

Query: 131 SPADQLLIAP 140
           S   QLL  P
Sbjct: 488 STLQQLLQLP 497


>gi|172072597 retinoblastoma-like 2 (p130) [Homo sapiens]
          Length = 1139

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 192 EVTGVTLTGEGQADLTLVSPGLDQLNRQLQLVTYSSRSYQTNTADTVRFSTEGHEAAFTI 251
           +VTG TL   GQ  +  +SPG  Q  +Q Q VT SS   +  ++ ++ F    H AA  +
Sbjct: 793 QVTGTTLQVPGQVAIQQISPG-GQQQKQGQSVTSSSNRPRKTSSLSLFFRKVYHLAAVRL 851

Query: 252 R 252
           R
Sbjct: 852 R 852


>gi|7710143 methyl-CpG binding domain protein 1 isoform 4 [Homo
           sapiens]
          Length = 503

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 15/137 (10%)

Query: 26  STRDAPGLRLPLAPWAPPQSPR--RPELPDLAPEPRYAHIPVRIKEQVVGLLAWNNCSCE 83
           + R  PG + PL P  P QSP    P    LAP P    I   + E  +  L  +  S  
Sbjct: 279 AARRRPGAQ-PLPPPPPSQSPEPTEPHPRALAPSPPAEFIYYCVDEDELKRLLPSVWSES 337

Query: 84  SSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQEFQAFLSRSQSPADQLLIAP--- 140
             G G P P++++ R     +      L+   ATR  +     + ++  A    + P   
Sbjct: 338 EDGAGSPPPYRRRKRPSSARRHHLGPTLKPTLATRTAQPDHTQAPTKQEAGGGFVLPPPG 397

Query: 141 ---------ANSPLQYP 148
                    A+SP+Q P
Sbjct: 398 TDLVFLREGASSPVQVP 414


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 18   ASLGLLYASTRDAPGLRLPLAPWAPPQSPRRPELPDLAPEPRYAHIPVRIK---EQVVGL 74
            A++G +  +T   P    PL P  PPQ P   E     P PR   +   IK   E++  L
Sbjct: 1502 AAVGAVSLATSQLPSP--PLGPTVPPQPPSALESDGEGPPPRVGFVDSTIKSLDEKLRTL 1559

Query: 75   LAWNNCSCESSGGGLPL 91
            L   +    S+  G P+
Sbjct: 1560 LYQEHVPTSSASAGTPV 1576


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
            sapiens]
          Length = 2881

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 84   SSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQEFQAFLSRSQSPADQLLIAPANS 143
            S  GGL L FQKQ   +   + FD  +     A  +Q++   L   QS ++  L+   N 
Sbjct: 2334 SKEGGLKLTFQKQ--GLAQKRPFDGED----GALGQQQYLTRLRELQSASETSLV---NF 2384

Query: 144  PLQYPLQGVEVQP 156
            P   P+ G  +QP
Sbjct: 2385 PKSIPVSGTSIQP 2397


>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
           sapiens]
          Length = 1268

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 204 ADLTLVSPGLDQL-----NRQLQLVT-YSSRSYQTNTADTVRFSTEGHEAAFTIRIRHPP 257
           ADLT ++  L +L     NR ++ VT YSS S ++ +++      E      T+ +   P
Sbjct: 710 ADLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESETHDGTVAVSDIP 769

Query: 258 NPRLYPPGSLPQGAQYNISALVTIATKT 285
             RL P G+     QYN+  + T   +T
Sbjct: 770 --RLIPTGAPGSNEQYNVGMVGTHGLET 795


>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
           sapiens]
          Length = 1297

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 204 ADLTLVSPGLDQL-----NRQLQLVT-YSSRSYQTNTADTVRFSTEGHEAAFTIRIRHPP 257
           ADLT ++  L +L     NR ++ VT YSS S ++ +++      E      T+ +   P
Sbjct: 739 ADLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESETHDGTVAVSDIP 798

Query: 258 NPRLYPPGSLPQGAQYNISALVTIATKT 285
             RL P G+     QYN+  + T   +T
Sbjct: 799 --RLIPTGAPGSNEQYNVGMVGTHGLET 824


>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
           sapiens]
          Length = 1323

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 204 ADLTLVSPGLDQL-----NRQLQLVT-YSSRSYQTNTADTVRFSTEGHEAAFTIRIRHPP 257
           ADLT ++  L +L     NR ++ VT YSS S ++ +++      E      T+ +   P
Sbjct: 765 ADLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESETHDGTVAVSDIP 824

Query: 258 NPRLYPPGSLPQGAQYNISALVTIATKT 285
             RL P G+     QYN+  + T   +T
Sbjct: 825 --RLIPTGAPGSNEQYNVGMVGTHGLET 850


>gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo
           sapiens]
          Length = 1352

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 204 ADLTLVSPGLDQL-----NRQLQLVT-YSSRSYQTNTADTVRFSTEGHEAAFTIRIRHPP 257
           ADLT ++  L +L     NR ++ VT YSS S ++ +++      E      T+ +   P
Sbjct: 794 ADLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESETHDGTVAVSDIP 853

Query: 258 NPRLYPPGSLPQGAQYNISALVTIATKT 285
             RL P G+     QYN+  + T   +T
Sbjct: 854 --RLIPTGAPGSNEQYNVGMVGTHGLET 879


>gi|112807221 N-acetylgalactosaminyltransferase 12 [Homo sapiens]
          Length = 581

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 4  GRRALCALVLLLACASLGLLYASTRDA-PGLRLPLAPWAPPQSPRRPELP 52
          GR AL  L+ LLA A LG +  + R A  G   P  P  P    R P +P
Sbjct: 17 GREALLVLLALLALAGLGSVLRAQRGAGAGAAEPGPPRTPRPGRREPVMP 66


>gi|60460889 Myb protein P42POP [Homo sapiens]
          Length = 399

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/37 (43%), Positives = 18/37 (48%)

Query: 36  PLAPWAPPQSPRRPELPDLAPEPRYAHIPVRIKEQVV 72
           PL P  PP  P RP LP  AP+      PV +   VV
Sbjct: 309 PLPPPPPPPPPPRPVLPPPAPKVEITPEPVSVVAAVV 345


>gi|208609985 SH2 domain containing 3A [Homo sapiens]
          Length = 576

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 12  VLLLACASLGLLYASTRDAPGLRLPLAPWAPPQSPRRPELPDLAPEP 58
           VLL A A LG +  S R + G     AP  PP++P   ELPD +  P
Sbjct: 183 VLLKAPAPLGTVADSLRASDGQLQAKAPTKPPRTPSF-ELPDASERP 228


>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
          Length = 1006

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 8/44 (18%)

Query: 23  LYASTR----DAPGLRLPLAP----WAPPQSPRRPELPDLAPEP 58
           LY S R    DAP  R P AP     APP  P  P+ P  +P P
Sbjct: 598 LYCSGRRAPEDAPAARRPKAPPGPARAPPGQPAEPDAPRSSPGP 641


>gi|148664201 cytoskeleton associated protein 2 isoform 2 [Homo
           sapiens]
          Length = 683

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 21/88 (23%), Positives = 38/88 (43%)

Query: 165 LSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNRQLQLVT 224
           L ++  S     +++ T    T       + VT+     +++T  +  +   ++  QLV 
Sbjct: 195 LQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQNTQLVR 254

Query: 225 YSSRSYQTNTADTVRFSTEGHEAAFTIR 252
              RS+ +NT DTV+       A  TIR
Sbjct: 255 PPIRSHHSNTRDTVKQGISRTSANVTIR 282


>gi|148664244 cytoskeleton associated protein 2 isoform 1 [Homo
           sapiens]
          Length = 682

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 21/88 (23%), Positives = 38/88 (43%)

Query: 165 LSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNRQLQLVT 224
           L ++  S     +++ T    T       + VT+     +++T  +  +   ++  QLV 
Sbjct: 194 LQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQNTQLVR 253

Query: 225 YSSRSYQTNTADTVRFSTEGHEAAFTIR 252
              RS+ +NT DTV+       A  TIR
Sbjct: 254 PPIRSHHSNTRDTVKQGISRTSANVTIR 281


>gi|226246533 TOX high mobility group box family member 3 isoform 2
           [Homo sapiens]
          Length = 571

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 8/131 (6%)

Query: 109 AELRAASATREQEFQAFLSRSQSPADQLLIAPA--NSPL-QYPLQGVEVQPL-----RSI 160
           A L + +A    E Q   S  Q+ A   L +    N+PL Q+       Q L     RSI
Sbjct: 319 ASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNTPLSQHGTVSASPQTLQQSLPRSI 378

Query: 161 LVPGLSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNRQL 220
               L+++    Q V  V + A++ +   A  ++ +  T  G A  T VSP +     Q+
Sbjct: 379 APKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQM 438

Query: 221 QLVTYSSRSYQ 231
           QL     +  Q
Sbjct: 439 QLQQQQQQQQQ 449


>gi|226054295 TOX high mobility group box family member 3 isoform 1
           [Homo sapiens]
          Length = 576

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 8/131 (6%)

Query: 109 AELRAASATREQEFQAFLSRSQSPADQLLIAPA--NSPL-QYPLQGVEVQPL-----RSI 160
           A L + +A    E Q   S  Q+ A   L +    N+PL Q+       Q L     RSI
Sbjct: 324 ASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNTPLSQHGTVSASPQTLQQSLPRSI 383

Query: 161 LVPGLSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNRQL 220
               L+++    Q V  V + A++ +   A  ++ +  T  G A  T VSP +     Q+
Sbjct: 384 APKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQM 443

Query: 221 QLVTYSSRSYQ 231
           QL     +  Q
Sbjct: 444 QLQQQQQQQQQ 454


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,330,532
Number of Sequences: 37866
Number of extensions: 989444
Number of successful extensions: 3315
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 3281
Number of HSP's gapped (non-prelim): 54
length of query: 533
length of database: 18,247,518
effective HSP length: 107
effective length of query: 426
effective length of database: 14,195,856
effective search space: 6047434656
effective search space used: 6047434656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.