Guide to the Human Genome
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Name: B4GALNT2 Sequence: fasta or formatted (506aa) NCBI GI: 227498224
Description:

beta-1,4-N-acetyl-galactosaminyl transferase 2 isoform b

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [566aa] beta-1,4-N-acetyl-galactosaminyl transferase 2 isoform a
alt prot [480aa] beta-1,4-N-acetyl-galactosaminyl transferase 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         23           2
 C cysteine            1.2          6           1
 D aspartate           4.3         22           3
 E glutamate           5.5         28           2
 F phenylalanine       6.1         31           2
 G glycine             6.9         35           2
 H histidine           2.8         14           1
 I isoleucine          4.3         22           2
 K lysine              5.5         28           1
 L leucine            12.5         63           3
 M methionine          1.6          8           1
 N asparagine          3.2         16           1
 P proline             6.7         34           1
 Q glutamine           5.1         26           1
 R arginine            5.1         26           2
 S serine              5.9         30           2
 T threonine           5.3         27           2
 V valine              9.3         47           2
 W tryptophan          0.8          4           1
 Y tyrosine            3.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta-1,4-N-acetyl-galactosaminyl transferase 2 isof... 
B4GALNT2              0.992   beta-1,4-N-acetyl-galactosaminyl transferase 2 isof...
B4GALNT2              0.951   beta-1,4-N-acetyl-galactosaminyl transferase 2 isof...
B4GALNT1              0.344   beta-1,4-N-acetyl-galactosaminyl transferase 1 
EPHA1                 0.006   ephrin receptor EphA1 
RNF216                0.005   ring finger protein 216 isoform b 
RNF216                0.005   ring finger protein 216 isoform a 
MTHFD1                0.004   methylenetetrahydrofolate dehydrogenase 1 
CCDC93                0.004   coiled-coil domain containing 93 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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