Guide to the Human Genome
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Name: FLJ39051 Sequence: fasta or formatted (92aa) NCBI GI: 239744514
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {92aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4          5           1
 C cysteine            1.1          1           1
 D aspartate           2.2          2           1
 E glutamate           4.3          4           1
 F phenylalanine       2.2          2           1
 G glycine            10.9         10           1
 H histidine           5.4          5           2
 I isoleucine          0.0          0           0
 K lysine              2.2          2           1
 L leucine             5.4          5           1
 M methionine          3.3          3           1
 N asparagine          1.1          1           1
 P proline            12.0         11           2
 Q glutamine           7.6          7           1
 R arginine           15.2         14           2
 S serine              8.7          8           2
 T threonine           5.4          5           1
 V valine              5.4          5           1
 W tryptophan          1.1          1           1
 Y tyrosine            1.1          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FLJ39051              1.000   PREDICTED: hypothetical protein 
B4GALNT1              0.047   beta-1,4-N-acetyl-galactosaminyl transferase 1 
SIPA1L3               0.035   signal-induced proliferation-associated 1 like 3 [Ho...
LOC100128398          0.023   PREDICTED: hypothetical protein 
LOC100128398          0.023   PREDICTED: hypothetical protein 
LOC100128398          0.023   PREDICTED: hypothetical protein 
WDR81                 0.017   PREDICTED: WD repeat domain 81 
LOC100290102          0.017   PREDICTED: hypothetical protein XP_002347733 
LOC100287036          0.017   PREDICTED: hypothetical protein XP_002344168 
CELSR3                0.017   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
CCDC123               0.017   coiled-coil domain containing 123 
LOC100291926          0.012   PREDICTED: hypothetical protein XP_002345126 
LOC100294382          0.012   PREDICTED: hypothetical protein 
COBL                  0.012   cordon-bleu homolog 
RBM33                 0.012   RNA binding motif protein 33 
INSM1                 0.012   insulinoma-associated 1 
ESPNL                 0.012   espin-like 
LOC100288336          0.012   PREDICTED: hypothetical protein XP_002343795 
CLDN5                 0.012   claudin 5 
CLDN5                 0.012   claudin 5 
PHF6                  0.012   PHD finger protein 6 isoform 2 
PAPPA                 0.012   pregnancy-associated plasma protein A preproprotein ...
LOC100293107          0.012   PREDICTED: hypothetical protein 
LOC100130982          0.012   PREDICTED: hypothetical protein 
LOC100290679          0.012   PREDICTED: hypothetical protein XP_002347834 
LOC100127891          0.012   PREDICTED: similar to hCG2042508 
LOC100130982          0.012   PREDICTED: hypothetical protein 
LOC100288571          0.012   PREDICTED: hypothetical protein XP_002343612 
LOC100127891          0.012   PREDICTED: similar to hCG2042508 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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