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Search of human proteins with 4503641
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503641 coagulation factor III precursor [Homo sapiens]
(295 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503641 coagulation factor III precursor [Homo sapiens] 599 e-172
gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens] 61 1e-09
gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens] 55 1e-07
gi|31083156 interleukin 20 receptor, alpha [Homo sapiens] 54 2e-07
gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens] 51 1e-06
gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens] 45 1e-04
gi|40255073 interleukin 20 receptor beta precursor [Homo sapiens] 42 6e-04
gi|24430215 interleukin 10 receptor, beta precursor [Homo sapiens] 39 0.005
gi|46488935 interferon alpha/beta receptor 2 isoform b precursor... 35 0.060
gi|19923129 interferon alpha/beta receptor 2 isoform b precursor... 35 0.060
gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens] 34 0.13
gi|46488937 interferon alpha/beta receptor 2 isoform a precursor... 34 0.18
gi|4557880 interferon gamma receptor 1 precursor [Homo sapiens] 34 0.18
gi|4506309 protein tyrosine phosphatase, receptor type, D isofor... 33 0.23
gi|18860890 protein tyrosine phosphatase, receptor type, D isofo... 33 0.23
gi|18860892 protein tyrosine phosphatase, receptor type, D isofo... 33 0.23
gi|18860894 protein tyrosine phosphatase, receptor type, D isofo... 33 0.23
gi|104487002 protein tyrosine phosphatase, receptor type, D isof... 32 0.51
gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens] 31 1.1
gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens] 31 1.1
gi|25014103 interleukin 28 receptor, alpha isoform 1 [Homo sapiens] 31 1.5
gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens] 31 1.5
gi|88758613 CD93 antigen precursor [Homo sapiens] 31 1.5
gi|148227044 ecotropic viral integration site 2B [Homo sapiens] 31 1.5
gi|153792230 hypothetical protein LOC57670 [Homo sapiens] 29 4.3
gi|211058421 zinc finger protein 844 [Homo sapiens] 28 7.4
gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Hom... 28 7.4
gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Hom... 28 7.4
gi|6552337 zinc finger, FYVE domain containing 9 isoform 2 [Homo... 28 7.4
gi|4507157 sortilin-related receptor containing LDLR class A rep... 28 9.6
>gi|4503641 coagulation factor III precursor [Homo sapiens]
Length = 295
Score = 599 bits (1545), Expect = e-172
Identities = 295/295 (100%), Positives = 295/295 (100%)
Query: 1 METPAWPRVPRPETAVARTLLLGWVFAQVAGASGTTNTVAAYNLTWKSTNFKTILEWEPK 60
METPAWPRVPRPETAVARTLLLGWVFAQVAGASGTTNTVAAYNLTWKSTNFKTILEWEPK
Sbjct: 1 METPAWPRVPRPETAVARTLLLGWVFAQVAGASGTTNTVAAYNLTWKSTNFKTILEWEPK 60
Query: 61 PVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGS 120
PVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGS
Sbjct: 61 PVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGS 120
Query: 121 AGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFG 180
AGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFG
Sbjct: 121 AGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFG 180
Query: 181 KDLIYTLYYWKSSSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVE 240
KDLIYTLYYWKSSSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVE
Sbjct: 181 KDLIYTLYYWKSSSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVE 240
Query: 241 CMGQEKGEFREIFYIIGAVVFVVIILVIILAISLHKCRKAGVGQSWKENSPLNVS 295
CMGQEKGEFREIFYIIGAVVFVVIILVIILAISLHKCRKAGVGQSWKENSPLNVS
Sbjct: 241 CMGQEKGEFREIFYIIGAVVFVVIILVIILAISLHKCRKAGVGQSWKENSPLNVS 295
>gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens]
Length = 231
Score = 61.2 bits (147), Expect = 1e-09
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 20/230 (8%)
Query: 21 LLGWVFAQVAGASGTTNTVAAYNLTWKSTNFKTILEWEPKPV----NQVYTVQIST-KSG 75
L+ + VAG T ++ + ++S NF IL+W+P + VY VQ
Sbjct: 11 LISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIYGQR 70
Query: 76 DWKSK--CFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFT 133
WK+K C+ T + CDLT E D+++ Y RV + AG+ + +P FT
Sbjct: 71 QWKNKEDCWGTQELSCDLTSE-TSDIQEPYYGRVRAASAGSYSE--------WSMTPRFT 121
Query: 134 PYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVR-RNNTFLSLRDVFGKDLIYTLYYWKS 192
P+ ET + P + + QV + V + R + +S+ D + +L+Y ++ +
Sbjct: 122 PWWETKI-DPPVMNITQVNGSLLVILHAPNLPYRYQKEKNVSIEDYY--ELLYRVFIINN 178
Query: 193 SSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM 242
S ++ + + + + V A I ++R+S S C+
Sbjct: 179 SLEKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSEERCV 228
>gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens]
Length = 130
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 21 LLGWVFAQVAGASGTTNTVAAYNLTWKSTNFKTILEWEPKPV----NQVYTVQIST-KSG 75
L+ + VAG T ++ + ++S NF IL+W+P + VY VQ
Sbjct: 11 LISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIYGQR 70
Query: 76 DWKSK--CFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFT 133
WK+K C+ T + CDLT E D+++ Y RV + AG+ + +P FT
Sbjct: 71 QWKNKEDCWGTQELSCDLTSE-TSDIQEPYYGRVRAASAGSYSE--------WSMTPRFT 121
Query: 134 PYLETNLG 141
P+ E G
Sbjct: 122 PWWERAKG 129
>gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]
Length = 553
Score = 53.5 bits (127), Expect = 2e-07
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 29/264 (10%)
Query: 43 NLTWKSTNFKTILEWEP----KPVNQVYTVQ---ISTKSGDWKSKCFYTTDTECDLTDEI 95
N+T+ S N K +L+W P + V YTVQ K KS+C T CDL+ E
Sbjct: 42 NITFLSINMKNVLQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAE- 100
Query: 96 VKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKV 155
D + Y A+V + +G F P+LET +G P + +
Sbjct: 101 TSDYEHQYYAKVKAIWGTKCSKWAESG--------RFYPFLETQIGPPEVALTTDEKSIS 152
Query: 156 NVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGK-KTAKTNTNEFLIDVDKG 214
V E+ + +S++ ++ +L Y + + S+ TN L ++
Sbjct: 153 VVLTAPEKWKRNPEDLPVSMQQIY-SNLKYNVSVLNTKSNRTWSQCVTNHTLVLTWLEPN 211
Query: 215 ENYCFSVQAVIPSRTVNRKSTDSPVEC---MGQEKGEFR-EIFYIIGAVVFVVIILVIIL 270
YC V++ +P R++ S +C + + EF+ +I + V + + L ++
Sbjct: 212 TLYCVHVESFVPGPP--RRAQPSEKQCARTLKDQSSEFKAKIIFWYVLPVSITVFLFSVM 269
Query: 271 AISLHKCRKAGVGQSWKENSPLNV 294
S+++ G KE P N+
Sbjct: 270 GYSIYRYIHVG-----KEKHPANL 288
>gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens]
Length = 263
Score = 51.2 bits (121), Expect = 1e-06
Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 52/262 (19%)
Query: 21 LLGWVFAQVAGASGTTNTVAAYNLTWKSTNFKTILEWEPKPV----NQVYTVQ------I 70
L+ + VAG T ++ + ++S NF IL+W+P + VY VQ
Sbjct: 11 LISFFLTGVAGTQSTHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVYFVQYKIMFSC 70
Query: 71 STKSG---------------------------DWKSK--CFYTTDTECDLTDEIVKDVKQ 101
S KS WK+K C+ T + CDLT E D+++
Sbjct: 71 SMKSSHQKPSGCWQHISCNFPGCRTLAKYGQRQWKNKEDCWGTQELSCDLTSE-TSDIQE 129
Query: 102 TYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVED 161
Y RV + AG+ + +P FTP+ ET + P + + QV + V +
Sbjct: 130 PYYGRVRAASAGSYSE--------WSMTPRFTPWWETKI-DPPVMNITQVNGSLLVILHA 180
Query: 162 ERTLVR-RNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAKTNTNEFLIDVDKGENYCFS 220
R + +S+ D + +L+Y ++ +S ++ + + + +
Sbjct: 181 PNLPYRYQKEKNVSIEDYY--ELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSSYC 238
Query: 221 VQAVIPSRTVNRKSTDSPVECM 242
V A I ++R+S S C+
Sbjct: 239 VVAEIYQPMLDRRSQRSEERCV 260
>gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens]
Length = 574
Score = 44.7 bits (104), Expect = 1e-04
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 18 RTLLLGWVFAQVAGASGTTNTVAAYNLTWKSTNFKTILEWEPKP---VNQVYTVQIST-K 73
RTLL +A + + ++ ++S+NF+ IL W+ P + VY+++ T
Sbjct: 2 RTLLTILTVGSLAAHAPEDPSDLLQHVKFQSSNFENILTWDSGPEGTPDTVYSIEYKTYG 61
Query: 74 SGDWKSK--CFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPE 131
DW +K C T C+LT E ++ + Y ARV + AG +T + +
Sbjct: 62 ERDWVAKKGCQRITRKSCNLTVE-TGNLTELYYARVTAVSAGGRSAT--------KMTDR 112
Query: 132 FTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTF-LSLRDVFGKDLIYTL 187
F+ T L P + +V + + V T +R + L+L D+F DL Y L
Sbjct: 113 FSSLQHTTLKPPDVTCISKV-RSIQMIVHPTPTPIRAGDGHRLTLEDIF-HDLFYHL 167
>gi|40255073 interleukin 20 receptor beta precursor [Homo sapiens]
Length = 311
Score = 42.0 bits (97), Expect = 6e-04
Identities = 59/245 (24%), Positives = 94/245 (38%), Gaps = 46/245 (18%)
Query: 40 AAYNLTWKSTNFKTILEWEP--KPVNQVY-TVQISTK------SGDW--KSKCFYTTDTE 88
A NL+ STN K +L W P P VY +V+ + S W S C T E
Sbjct: 37 APQNLSVLSTNMKHLLMWSPVIAPGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPE 96
Query: 89 CDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSF 148
CD+TD+I V Y RV + + P NS T L +P ++
Sbjct: 97 CDVTDDITATV--PYNLRVRATLGSQTSAWSILKHPFNRNS--------TILTRPGME-I 145
Query: 149 EQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAKT----NT 204
+ G + + +ED G + + YW+ ++ K
Sbjct: 146 TKDGFHLVIELED-----------------LGPQFEFLVAYWRREPGAEEHVKMVRSGGI 188
Query: 205 NEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECMGQEKGEFREIFYIIGAVVFVVI 264
L ++ G YC Q + + + R S S EC+ + +GE + + A V ++
Sbjct: 189 PVHLETMEPGAAYCVKAQTFV--KAIGRYSAFSQTECV-EVQGEAIPLVLALFAFVGFML 245
Query: 265 ILVII 269
ILV++
Sbjct: 246 ILVVV 250
>gi|24430215 interleukin 10 receptor, beta precursor [Homo sapiens]
Length = 325
Score = 38.9 bits (89), Expect = 0.005
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 35/239 (14%)
Query: 43 NLTWKSTNFKTILEWEPKPV---NQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDV 99
N+ S NFK IL+WE N +T Q + ++ KC TT TECD + + K
Sbjct: 26 NVRMNSVNFKNILQWESPAFAKGNLTFTAQYLSYR-IFQDKCMNTTLTECDFS-SLSKYG 83
Query: 100 KQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNV-- 157
T R A E + F P +T +G P +Q E + +++
Sbjct: 84 DHTLRVR-----------AEFADEHSDWVNITFCPVDDTIIGPPGMQ-VEVLADSLHMRF 131
Query: 158 ---TVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGK-KTAKTNTNEFLIDVDK 213
+E+E N + S Y + YWK+ + K + E L +++
Sbjct: 132 LAPKIENEYETWTMKNVYNS--------WTYNVQYWKNGTDEKFQITPQYDFEVLRNLEP 183
Query: 214 GENYCFSVQAVIPSRTVNRKSTDSPVECMGQEKGEFREIFYIIGAVVFVVIILVIILAI 272
YC V+ +P R N+ S C E + + AV+ + + ++ LA+
Sbjct: 184 WTTYCVQVRGFLPDR--NKAGEWSEPVCEQTTHDETVPSWMV--AVILMASVFMVCLAL 238
>gi|46488935 interferon alpha/beta receptor 2 isoform b precursor
[Homo sapiens]
Length = 331
Score = 35.4 bits (80), Expect = 0.060
Identities = 64/264 (24%), Positives = 95/264 (35%), Gaps = 49/264 (18%)
Query: 50 NFKTILEWEPK-----PVNQVYTVQISTKSGDWK--SKCFYTTDTECDLTDEIVKDVKQT 102
NF++IL WE K P + I +K D K C TT + CDLTDE + +
Sbjct: 47 NFRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDE-WRSTHEA 105
Query: 103 YLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDE 162
Y+ + + S L+ S F ++ + P FE VG ++ V +
Sbjct: 106 YVTVLEGF---------SGNTTLFSCSHNFWLAIDMSFEPP---EFEIVGFTNHINVMVK 153
Query: 163 RTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAKTNTNEFLIDVDK---GENYCF 219
+ L V + + K G + F +DK NYC
Sbjct: 154 FPSIVEEELQFDLSLVIEEQSEGIVKKHKPEIKGNM-----SGNFTYIIDKLIPNTNYCV 208
Query: 220 SVQAVIPSRTVNRKSTDSPVECM----GQEKGEFREIFYIIGAVVFVVIILV-------- 267
SV + + SP++C GQE E E I G + +I LV
Sbjct: 209 SVYL---EHSDEQAVIKSPLKCTLLPPGQE-SESAESAKIGGIITVFLIALVLTSTIVTL 264
Query: 268 -----IILAISLHKCRKAGVGQSW 286
I L SL K + G+ + W
Sbjct: 265 KWIGYICLRNSLPKVLRQGLAKGW 288
>gi|19923129 interferon alpha/beta receptor 2 isoform b precursor
[Homo sapiens]
Length = 331
Score = 35.4 bits (80), Expect = 0.060
Identities = 64/264 (24%), Positives = 95/264 (35%), Gaps = 49/264 (18%)
Query: 50 NFKTILEWEPK-----PVNQVYTVQISTKSGDWK--SKCFYTTDTECDLTDEIVKDVKQT 102
NF++IL WE K P + I +K D K C TT + CDLTDE + +
Sbjct: 47 NFRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDE-WRSTHEA 105
Query: 103 YLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDE 162
Y+ + + S L+ S F ++ + P FE VG ++ V +
Sbjct: 106 YVTVLEGF---------SGNTTLFSCSHNFWLAIDMSFEPP---EFEIVGFTNHINVMVK 153
Query: 163 RTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAKTNTNEFLIDVDK---GENYCF 219
+ L V + + K G + F +DK NYC
Sbjct: 154 FPSIVEEELQFDLSLVIEEQSEGIVKKHKPEIKGNM-----SGNFTYIIDKLIPNTNYCV 208
Query: 220 SVQAVIPSRTVNRKSTDSPVECM----GQEKGEFREIFYIIGAVVFVVIILV-------- 267
SV + + SP++C GQE E E I G + +I LV
Sbjct: 209 SVYL---EHSDEQAVIKSPLKCTLLPPGQE-SESAESAKIGGIITVFLIALVLTSTIVTL 264
Query: 268 -----IILAISLHKCRKAGVGQSW 286
I L SL K + G+ + W
Sbjct: 265 KWIGYICLRNSLPKVLRQGLAKGW 288
>gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens]
Length = 557
Score = 34.3 bits (77), Expect = 0.13
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 183 LIYTLYYWKSSSSG-KKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVEC 241
LIY + +W+++S+ +K + T+ + ++ YC +A +N+ S S C
Sbjct: 367 LIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVC 426
Query: 242 MGQEKGEFREIFYIIGAVVFVVIILVIILA 271
+ G +I+ I+G + + + +I A
Sbjct: 427 EKTKPGNTSKIWLIVGICIALFALPFVIYA 456
>gi|46488937 interferon alpha/beta receptor 2 isoform a precursor
[Homo sapiens]
Length = 515
Score = 33.9 bits (76), Expect = 0.18
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 50 NFKTILEWEPK-----PVNQVYTVQISTKSGDWK--SKCFYTTDTECDLTDE 94
NF++IL WE K P + I +K D K C TT + CDLTDE
Sbjct: 47 NFRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDE 98
>gi|4557880 interferon gamma receptor 1 precursor [Homo sapiens]
Length = 489
Score = 33.9 bits (76), Expect = 0.18
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 14/117 (11%)
Query: 34 GTTNTVAAYNLTWKSTNFKTILEWEPK--PVNQVYTVQI---STKSGDWKSKCFYTTDTE 88
G ++ N+T +S N I+ WE + P V+TV++ K+ +W C +
Sbjct: 25 GPSSVPTPTNVTIESYNMNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACINISHHY 84
Query: 89 CDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTI 145
C+++D + ++ V++ E Y S EF + +G P +
Sbjct: 85 CNISDHVGDPSNSLWV---------RVKARVGQKESAYAKSEEFAVCRDGKIGPPKL 132
>gi|4506309 protein tyrosine phosphatase, receptor type, D isoform 1
precursor [Homo sapiens]
Length = 1912
Score = 33.5 bits (75), Expect = 0.23
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 211 VDKGENYCFSVQAVIPSRTVNRKSTD---SPVECMGQEK----GEFREIFYIIGAVVFVV 263
+ G+ Y F V AV+ +T PV M + E + +++G V+ VV
Sbjct: 1219 LQSGQEYVFFVLAVMEHAESKMYATSPYSDPVVSMDLDPQPITDEEEGLIWVVGPVLAVV 1278
Query: 264 IILVIILAISLHKCRKAGVGQSWKENSPLN 293
I+ I++AI L+K RK S K + P N
Sbjct: 1279 FIICIVIAILLYK-RKRAESDSRKSSIPNN 1307
>gi|18860890 protein tyrosine phosphatase, receptor type, D isoform 2
precursor [Homo sapiens]
Length = 1899
Score = 33.5 bits (75), Expect = 0.23
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 211 VDKGENYCFSVQAVIPSRTVNRKSTD---SPVECMGQEK----GEFREIFYIIGAVVFVV 263
+ G+ Y F V AV+ +T PV M + E + +++G V+ VV
Sbjct: 1206 LQSGQEYVFFVLAVMEHAESKMYATSPYSDPVVSMDLDPQPITDEEEGLIWVVGPVLAVV 1265
Query: 264 IILVIILAISLHKCRKAGVGQSWKENSPLN 293
I+ I++AI L+K RK S K + P N
Sbjct: 1266 FIICIVIAILLYK-RKRAESDSRKSSIPNN 1294
>gi|18860892 protein tyrosine phosphatase, receptor type, D isoform 3
precursor [Homo sapiens]
Length = 1903
Score = 33.5 bits (75), Expect = 0.23
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 211 VDKGENYCFSVQAVIPSRTVNRKSTD---SPVECMGQEK----GEFREIFYIIGAVVFVV 263
+ G+ Y F V AV+ +T PV M + E + +++G V+ VV
Sbjct: 1210 LQSGQEYVFFVLAVMEHAESKMYATSPYSDPVVSMDLDPQPITDEEEGLIWVVGPVLAVV 1269
Query: 264 IILVIILAISLHKCRKAGVGQSWKENSPLN 293
I+ I++AI L+K RK S K + P N
Sbjct: 1270 FIICIVIAILLYK-RKRAESDSRKSSIPNN 1298
>gi|18860894 protein tyrosine phosphatase, receptor type, D isoform
4 precursor [Homo sapiens]
Length = 1501
Score = 33.5 bits (75), Expect = 0.23
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 211 VDKGENYCFSVQAVIPSRTVNRKSTD---SPVECMGQEK----GEFREIFYIIGAVVFVV 263
+ G+ Y F V AV+ +T PV M + E + +++G V+ VV
Sbjct: 808 LQSGQEYVFFVLAVMEHAESKMYATSPYSDPVVSMDLDPQPITDEEEGLIWVVGPVLAVV 867
Query: 264 IILVIILAISLHKCRKAGVGQSWKENSPLN 293
I+ I++AI L+K RK S K + P N
Sbjct: 868 FIICIVIAILLYK-RKRAESDSRKSSIPNN 896
>gi|104487002 protein tyrosine phosphatase, receptor type, D isoform
5 precursor [Homo sapiens]
Length = 1502
Score = 32.3 bits (72), Expect = 0.51
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 211 VDKGENYCFSVQAVIPSRTVNRKSTD---SPVECMGQEK----GEFREIFYIIGAVVFVV 263
+ G+ Y F V AV+ +T PV M + E + +++G V+ VV
Sbjct: 805 LQSGQEYVFFVLAVMEHAESKMYATSPYSDPVVSMDLDPQPITDEEEGLIWVVGPVLAVV 864
Query: 264 IILVIILAISLHKC---RKAGVGQSWKENSPLN 293
I+ I++AI L+K RK S K + P N
Sbjct: 865 FIICIVIAILLYKSKPDRKRAESDSRKSSIPNN 897
>gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]
Length = 1474
Score = 31.2 bits (69), Expect = 1.1
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 217 YCFSVQAVIPSRTVNRKSTDSPVECMGQEKGEFREIFYIIGAVVFVVIILVIILAISLHK 276
YCF V + ++ +S + C + F I+ IG V FV+++ ++ L ++LHK
Sbjct: 971 YCFPALVVGIAAAIDYRSYGTEKACWLRVDNYF--IWSFIGPVSFVIVVNLVFLMVTLHK 1028
>gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
Length = 1469
Score = 31.2 bits (69), Expect = 1.1
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 217 YCFSVQAVIPSRTVNRKSTDSPVECMGQEKGEFREIFYIIGAVVFVVIILVIILAISLHK 276
YCF V + ++ +S + C + F I+ IG V FV+++ ++ L ++LHK
Sbjct: 966 YCFPALVVGIAAAIDYRSYGTEKACWLRVDNYF--IWSFIGPVSFVIVVNLVFLMVTLHK 1023
>gi|25014103 interleukin 28 receptor, alpha isoform 1 [Homo sapiens]
Length = 520
Score = 30.8 bits (68), Expect = 1.5
Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 32/246 (13%)
Query: 32 ASGTTNTVAAYNLTWKSTNFKTILEW-----EPKPVNQVYTVQISTKSGDWK--SKCFYT 84
A G N+T S NF L W P+ V Q S W+ +C T
Sbjct: 18 APGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSPTRRRWREVEECAGT 77
Query: 85 TDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPT 144
+ C + +D+ + RV + + S+ P E+ E+ YL
Sbjct: 78 KELLCSMMCLKKQDLYNKFKGRVRTV-------SPSSKSPWVES--EYLDYL-------- 120
Query: 145 IQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKK----TA 200
FE + + ++ N T+ + DL Y + +WK + K T
Sbjct: 121 ---FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTP 177
Query: 201 KTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECMGQEKGEFREIFYIIGAVV 260
+ + E++C S + + + +V + S S C E E F ++ +++
Sbjct: 178 HGQPVQITLQPAASEHHCLSARTIY-TFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLL 236
Query: 261 FVVIIL 266
+++++
Sbjct: 237 ILLLVI 242
>gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens]
Length = 491
Score = 30.8 bits (68), Expect = 1.5
Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 32/246 (13%)
Query: 32 ASGTTNTVAAYNLTWKSTNFKTILEW-----EPKPVNQVYTVQISTKSGDWK--SKCFYT 84
A G N+T S NF L W P+ V Q S W+ +C T
Sbjct: 18 APGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSPTRRRWREVEECAGT 77
Query: 85 TDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPT 144
+ C + +D+ + RV + + S+ P E+ E+ YL
Sbjct: 78 KELLCSMMCLKKQDLYNKFKGRVRTV-------SPSSKSPWVES--EYLDYL-------- 120
Query: 145 IQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKK----TA 200
FE + + ++ N T+ + DL Y + +WK + K T
Sbjct: 121 ---FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTP 177
Query: 201 KTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECMGQEKGEFREIFYIIGAVV 260
+ + E++C S + + + +V + S S C E E F ++ +++
Sbjct: 178 HGQPVQITLQPAASEHHCLSARTIY-TFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLL 236
Query: 261 FVVIIL 266
+++++
Sbjct: 237 ILLLVI 242
>gi|88758613 CD93 antigen precursor [Homo sapiens]
Length = 652
Score = 30.8 bits (68), Expect = 1.5
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 252 IFYIIGAVVFVVIILVIILAISLHKCRKAGVGQSWKENSPLNVS 295
+FYI+G VV ++++L + L + +++ R+A + KE P N +
Sbjct: 583 LFYILGTVVAILLLLALALGLLVYRKRRA-KREEKKEKKPQNAA 625
>gi|148227044 ecotropic viral integration site 2B [Homo sapiens]
Length = 448
Score = 30.8 bits (68), Expect = 1.5
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 29/178 (16%)
Query: 116 ESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSL 175
E+ SAG+PL N+ + TP T+ Q S Q+ + T + ++ V S
Sbjct: 93 EAHTSAGQPLAYNTKQPTPIANTSSQQAVFTSARQLPSARTSTTQPPKSFVYTFTQQSSS 152
Query: 176 RDVFGKDLIYTLYYWKSSSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKST 235
+ + I +S K + +T F++D T + K T
Sbjct: 153 VQIPSRKQITVHNPSTQPTSTVKNSPRSTPGFILD------------------TTSNKQT 194
Query: 236 DSPVECMGQEKGEFREIFYIIGAVVFVVIILVIILAISLHKCRKAGV--GQSWKENSP 291
+K + I I+ V+ + +LV I+ I L KC + V Q+W SP
Sbjct: 195 --------PQKNNYNSIAAILIGVL-LTSMLVAIIIIVLWKCLRKPVLNDQNWAGRSP 243
>gi|153792230 hypothetical protein LOC57670 [Homo sapiens]
Length = 1884
Score = 29.3 bits (64), Expect = 4.3
Identities = 21/102 (20%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 180 GKDLIYTLYYWKSSSSGKKTAKTNTNEFLIDVDKGENYC---FSVQAVIPSRTVNRKSTD 236
G D L Y+ G++ + +++ + +D + +Q VI ++ V+R
Sbjct: 1182 GDDNPVQLIYFVEDQDGERLSAVKSSDLINKMDLQRAAIILGYRIQGVI-AQPVDRVKRP 1240
Query: 237 SPVECMGQEKGEFREIFYIIGAVVFVVIILVIILAISLHKCR 278
SP + + ++ I+G V+ V++++VI++ + CR
Sbjct: 1241 SP-------ESQSNNLWVIVGVVIPVLVVMVIVVILYWKLCR 1275
>gi|211058421 zinc finger protein 844 [Homo sapiens]
Length = 666
Score = 28.5 bits (62), Expect = 7.4
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 198 KTAKTNTNEFL---IDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECMGQEKGE 248
K + N L +D + EN+C + IP T+N+K++ C GE
Sbjct: 57 KNPRNNLRSLLGERVDENTEENHCGETSSQIPDDTLNKKTSPGVKSCESSVCGE 110
>gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Homo
sapiens]
Length = 1366
Score = 28.5 bits (62), Expect = 7.4
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 13/113 (11%)
Query: 35 TTNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTK-------------SGDWKSKC 81
T T N+T + + + W+ +N++ Q++ + +GD +C
Sbjct: 380 TLGTTEFLNMTEHFSESQDMTNWKLTKLNEMNDSQVNEEKEKFLQISQPEDTNGDSGGQC 439
Query: 82 FYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTP 134
D DL + + ++ + V PA N S G + + F P
Sbjct: 440 VGLADAGLDLKGTCISESEECDFSTVIDTPAANYLSNGCDSYGMQDPGVSFVP 492
>gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Homo
sapiens]
Length = 1425
Score = 28.5 bits (62), Expect = 7.4
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 13/113 (11%)
Query: 35 TTNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTK-------------SGDWKSKC 81
T T N+T + + + W+ +N++ Q++ + +GD +C
Sbjct: 380 TLGTTEFLNMTEHFSESQDMTNWKLTKLNEMNDSQVNEEKEKFLQISQPEDTNGDSGGQC 439
Query: 82 FYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTP 134
D DL + + ++ + V PA N S G + + F P
Sbjct: 440 VGLADAGLDLKGTCISESEECDFSTVIDTPAANYLSNGCDSYGMQDPGVSFVP 492
>gi|6552337 zinc finger, FYVE domain containing 9 isoform 2 [Homo
sapiens]
Length = 762
Score = 28.5 bits (62), Expect = 7.4
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 13/113 (11%)
Query: 35 TTNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTK-------------SGDWKSKC 81
T T N+T + + + W+ +N++ Q++ + +GD +C
Sbjct: 380 TLGTTEFLNMTEHFSESQDMTNWKLTKLNEMNDSQVNEEKEKFLQISQPEDTNGDSGGQC 439
Query: 82 FYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTP 134
D DL + + ++ + V PA N S G + + F P
Sbjct: 440 VGLADAGLDLKGTCISESEECDFSTVIDTPAANYLSNGCDSYGMQDPGVSFVP 492
>gi|4507157 sortilin-related receptor containing LDLR class A repeats
preproprotein [Homo sapiens]
Length = 2214
Score = 28.1 bits (61), Expect = 9.6
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Query: 107 VFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLV 166
+ S+ GN+ + S E + + +T+LG + +FE V T+
Sbjct: 1802 ILSHKVGNLTA---------HTSYEISAWAKTDLGDSPL-AFEHVMTRGVRPPAPSLKAK 1851
Query: 167 RRNNTFLSLRDVFGKDLIYTLYYWKSSSS---GKKTAKTNTNEFLIDVDKGENYCFSVQA 223
N T + ++++Y ++Y S K+ T+ + + V K E Y F V+
Sbjct: 1852 AINQTAVECTWTGPRNVVYGIFYATSFLDLYRNPKSLTTSLHNKTVIVSKDEQYLFLVRV 1911
Query: 224 VIP 226
V+P
Sbjct: 1912 VVP 1914
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,994,179
Number of Sequences: 37866
Number of extensions: 457588
Number of successful extensions: 1129
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1107
Number of HSP's gapped (non-prelim): 36
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.