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Search of human proteins with 4502685
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502685 CD79A antigen isoform 1 precursor [Homo sapiens]
(226 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502685 CD79A antigen isoform 1 precursor [Homo sapiens] 479 e-136
gi|11038672 CD79A antigen isoform 2 precursor [Homo sapiens] 381 e-106
gi|90193592 CD79B antigen isoform 3 precursor [Homo sapiens] 57 1e-08
gi|11038674 CD79B antigen isoform 1 precursor [Homo sapiens] 57 1e-08
gi|224586860 natural cytotoxicity triggering receptor 3 isoform ... 42 6e-04
gi|24475832 natural cytotoxicity triggering receptor 3 isoform a... 41 0.001
gi|83281200 protogenin [Homo sapiens] 40 0.002
gi|224586865 natural cytotoxicity triggering receptor 3 isoform ... 40 0.002
gi|75709184 contactin 3 [Homo sapiens] 40 0.002
gi|224994173 roundabout 1 isoform d [Homo sapiens] 39 0.004
gi|224994171 roundabout 1 isoform c [Homo sapiens] 39 0.004
gi|19743806 roundabout 1 isoform b [Homo sapiens] 39 0.004
gi|239748173 PREDICTED: similar to roundabout 1 isoform 1 [Homo ... 39 0.004
gi|239748171 PREDICTED: similar to roundabout 1 isoform 2 [Homo ... 39 0.004
gi|4506569 roundabout 1 isoform a [Homo sapiens] 39 0.004
gi|110349719 titin isoform N2-A [Homo sapiens] 39 0.005
gi|28373126 contactin 4 isoform c precursor [Homo sapiens] 39 0.005
gi|28373122 contactin 4 isoform a precursor [Homo sapiens] 39 0.005
gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens] 38 0.008
gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens] 38 0.008
gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens] 38 0.008
gi|156104876 fms-related tyrosine kinase 1 isoform 1 precursor [... 37 0.011
gi|193083163 roundabout, axon guidance receptor, homolog 2 isofo... 37 0.014
gi|61888896 roundabout, axon guidance receptor, homolog 2 isofor... 37 0.014
gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens] 36 0.023
gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens] 36 0.023
gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens] 36 0.031
gi|144226847 obscurin-like 1 [Homo sapiens] 35 0.052
gi|148664224 adhesion molecule, interacts with CXADR antigen 1 i... 35 0.052
gi|148664207 adhesion molecule, interacts with CXADR antigen 1 i... 35 0.052
>gi|4502685 CD79A antigen isoform 1 precursor [Homo sapiens]
Length = 226
Score = 479 bits (1233), Expect = e-136
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 60
MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN
Sbjct: 1 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 60
Query: 61 NANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG 120
NANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG
Sbjct: 61 NANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG 120
Query: 121 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD 180
TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD
Sbjct: 121 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD 180
Query: 181 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP 226
EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP
Sbjct: 181 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP 226
>gi|11038672 CD79A antigen isoform 2 precursor [Homo sapiens]
Length = 188
Score = 381 bits (978), Expect = e-106
Identities = 187/226 (82%), Positives = 188/226 (83%), Gaps = 38/226 (16%)
Query: 1 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 60
MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN
Sbjct: 1 MPGGPGVLQALPATIFLLFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSN 60
Query: 61 NANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG 120
NANVTWWRVLHGNYTWPPEFLGPGEDPN
Sbjct: 61 NANVTWWRVLHGNYTWPPEFLGPGEDPN-------------------------------- 88
Query: 121 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD 180
+PPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD
Sbjct: 89 ------EPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGD 142
Query: 181 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP 226
EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP
Sbjct: 143 EYEDENLYEGLNLDDCSMYEDISRGLQGTYQDVGSLNIGDVQLEKP 188
>gi|90193592 CD79B antigen isoform 3 precursor [Homo sapiens]
Length = 230
Score = 57.0 bits (136), Expect = 1e-08
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 27 GPGCQALWMHKVPASLMVSLGEDAHFQCPHNS-SNNANVTWWRVLHGNYTWPPEFLGPGE 85
G C +W P + G C NS S N + W + + N G E
Sbjct: 41 GSACSRIWQS--PRFIARKRGFTVKMHCYMNSASGNVSWLWKQEMDENPQQLKLEKGRME 98
Query: 86 DPNG----TLIIQNVNKSHGGIYVCRVQEGNES-YQQSCGTYLRVRQPPPRPFLDMGEGT 140
+ TL IQ + GIY C+ + N S Q CGT LRV L
Sbjct: 99 ESQNESLATLTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELRVMGFSTLAQLKQRNTL 158
Query: 141 KNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGDEYEDENLYEGLNLDDCSMYE 200
K+ II + ++++ +VP LLL + + K G+ E+++ YEGL++D + YE
Sbjct: 159 KDGIIMIQTLLIILFIIVPIFLLLDK---DDSKAGM------EEDHTYEGLDIDQTATYE 209
Query: 201 DI 202
DI
Sbjct: 210 DI 211
>gi|11038674 CD79B antigen isoform 1 precursor [Homo sapiens]
Length = 229
Score = 57.0 bits (136), Expect = 1e-08
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 27 GPGCQALWMHKVPASLMVSLGEDAHFQCPHNS-SNNANVTWWRVLHGNYTWPPEFLGPGE 85
G C +W P + G C NS S N + W + + N G E
Sbjct: 40 GSACSRIWQS--PRFIARKRGFTVKMHCYMNSASGNVSWLWKQEMDENPQQLKLEKGRME 97
Query: 86 DPNG----TLIIQNVNKSHGGIYVCRVQEGNES-YQQSCGTYLRVRQPPPRPFLDMGEGT 140
+ TL IQ + GIY C+ + N S Q CGT LRV L
Sbjct: 98 ESQNESLATLTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELRVMGFSTLAQLKQRNTL 157
Query: 141 KNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKLGLDAGDEYEDENLYEGLNLDDCSMYE 200
K+ II + ++++ +VP LLL + + K G+ E+++ YEGL++D + YE
Sbjct: 158 KDGIIMIQTLLIILFIIVPIFLLLDK---DDSKAGM------EEDHTYEGLDIDQTATYE 208
Query: 201 DI 202
DI
Sbjct: 209 DI 210
>gi|224586860 natural cytotoxicity triggering receptor 3 isoform b
[Homo sapiens]
Length = 177
Score = 41.6 bits (96), Expect = 6e-04
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 23/174 (13%)
Query: 18 LFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNN----ANVTWWR--VLH 71
+ LL + + PG ALW+ + P + G A C N+S +VTW+R V+
Sbjct: 4 MLLLILIMVHPGSCALWVSQ-PPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVP 62
Query: 72 GNYT--WPPEFLGPG---------EDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG 120
G PEF G D L I++V IYVCRV+ G
Sbjct: 63 GKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDASIYVCRVEVLGLGVGTGNG 122
Query: 121 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKRWQNEKL 174
T L V + P+ +G GT ++ A + F +V G+ + ++ ++ L
Sbjct: 123 TRLVVEKEHPQ----LGAGTV-LLLRAGFYAVSFLSVAVGSTVYYQGKYAKSTL 171
>gi|24475832 natural cytotoxicity triggering receptor 3 isoform a
[Homo sapiens]
Length = 201
Score = 40.8 bits (94), Expect = 0.001
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 26/181 (14%)
Query: 18 LFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNN----ANVTWWR--VLH 71
+ LL + + PG ALW+ + P + G A C N+S +VTW+R V+
Sbjct: 4 MLLLILIMVHPGSCALWVSQ-PPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVP 62
Query: 72 GNYT--WPPEFLGPG---------EDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG 120
G PEF G D L I++V IYVCRV+ G
Sbjct: 63 GKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDASIYVCRVEVLGLGVGTGNG 122
Query: 121 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFRKR---WQNEKLGLD 177
T L V + P+ +G GT ++ A + F +V G+ + ++ + W+ + L
Sbjct: 123 TRLVVEKEHPQ----LGAGTV-LLLRAGFYAVSFLSVAVGSTVYYQGKCLTWKGPRRQLP 177
Query: 178 A 178
A
Sbjct: 178 A 178
>gi|83281200 protogenin [Homo sapiens]
Length = 1150
Score = 40.0 bits (92), Expect = 0.002
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNY-TWPPEFLGPGEDPNGTLIIQNVN 97
P ++ SL + +C + ++W R+ H + + LG NG L+I +V
Sbjct: 241 PQNITTSLHQTVVLECMATGNPKPIISWSRLDHKSIDVFNTRVLG-----NGNLMISDVR 295
Query: 98 KSHGGIYVCR-VQEGNESYQQSCGTYLRVRQPP-----PRPFLDMGEGTKNRIITAEGI 150
H G+YVCR G ++ + T L V PP P GT + AEGI
Sbjct: 296 LQHAGVYVCRATTPGTRNFTVAMAT-LTVLAPPSFVEWPESLTRPRAGTARFVCQAEGI 353
>gi|224586865 natural cytotoxicity triggering receptor 3 isoform c
[Homo sapiens]
Length = 190
Score = 40.0 bits (92), Expect = 0.002
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 23/166 (13%)
Query: 18 LFLLSAVYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNN----ANVTWWR--VLH 71
+ LL + + PG ALW+ + P + G A C N+S +VTW+R V+
Sbjct: 4 MLLLILIMVHPGSCALWVSQ-PPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVP 62
Query: 72 GNYT--WPPEFLGPG---------EDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG 120
G PEF G D L I++V IYVCRV+ G
Sbjct: 63 GKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDASIYVCRVEVLGLGVGTGNG 122
Query: 121 TYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTLLLFR 166
T L V + P+ +G GT ++ A + F +V G+ + ++
Sbjct: 123 TRLVVEKEHPQ----LGAGTV-LLLRAGFYAVSFLSVAVGSTVYYQ 163
>gi|75709184 contactin 3 [Homo sapiens]
Length = 1028
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 39 PASLMVSLGEDAHFQCP--HNSSNNANVTWW--RVLHGNYTWPPEFLGPGEDPNGTLIIQ 94
P+++ VS+GE C H+ + TW+ L F G +G L+I+
Sbjct: 506 PSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIR 565
Query: 95 NVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPP 130
N+ H G YVC VQ G +S + +R PP
Sbjct: 566 NIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
>gi|224994173 roundabout 1 isoform d [Homo sapiens]
Length = 1551
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 17/140 (12%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTW---PPEFLGP-GEDPNGTLIIQ 94
P +V+LG FQC + + W R N + PP+ G L I
Sbjct: 321 PRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTIT 380
Query: 95 NVNKSHGGIYVCRVQEGNESYQQSCGTYLRVR-----QPPPRPFLDMGEGTKNRIITAEG 149
NV +S G Y+C Q N + YL V +PPP + +G N+ + +G
Sbjct: 381 NVQRSDVGYYIC--QTLNVAGSIITKAYLEVTDVIADRPPP----VIRQGPVNQTVAVDG 434
Query: 150 IILLFCAVV--PGTLLLFRK 167
+L C P +L+RK
Sbjct: 435 TFVLSCVATGSPVPTILWRK 454
>gi|224994171 roundabout 1 isoform c [Homo sapiens]
Length = 1606
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 17/140 (12%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTW---PPEFLGP-GEDPNGTLIIQ 94
P +V+LG FQC + + W R N + PP+ G L I
Sbjct: 321 PRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTIT 380
Query: 95 NVNKSHGGIYVCRVQEGNESYQQSCGTYLRVR-----QPPPRPFLDMGEGTKNRIITAEG 149
NV +S G Y+C Q N + YL V +PPP + +G N+ + +G
Sbjct: 381 NVQRSDVGYYIC--QTLNVAGSIITKAYLEVTDVIADRPPP----VIRQGPVNQTVAVDG 434
Query: 150 IILLFCAVV--PGTLLLFRK 167
+L C P +L+RK
Sbjct: 435 TFVLSCVATGSPVPTILWRK 454
>gi|19743806 roundabout 1 isoform b [Homo sapiens]
Length = 1612
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 17/140 (12%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTW---PPEFLGP-GEDPNGTLIIQ 94
P +V+LG FQC + + W R N + PP+ G L I
Sbjct: 318 PRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTIT 377
Query: 95 NVNKSHGGIYVCRVQEGNESYQQSCGTYLRVR-----QPPPRPFLDMGEGTKNRIITAEG 149
NV +S G Y+C Q N + YL V +PPP + +G N+ + +G
Sbjct: 378 NVQRSDVGYYIC--QTLNVAGSIITKAYLEVTDVIADRPPP----VIRQGPVNQTVAVDG 431
Query: 150 IILLFCAVV--PGTLLLFRK 167
+L C P +L+RK
Sbjct: 432 TFVLSCVATGSPVPTILWRK 451
>gi|239748173 PREDICTED: similar to roundabout 1 isoform 1 [Homo
sapiens]
Length = 1562
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 17/140 (12%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTW---PPEFLGP-GEDPNGTLIIQ 94
P +V+LG FQC + + W R N + PP+ G L I
Sbjct: 321 PRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTIT 380
Query: 95 NVNKSHGGIYVCRVQEGNESYQQSCGTYLRVR-----QPPPRPFLDMGEGTKNRIITAEG 149
NV +S G Y+C Q N + YL V +PPP + +G N+ + +G
Sbjct: 381 NVQRSDVGYYIC--QTLNVAGSIITKAYLEVTDVIADRPPP----VIRQGPVNQTVAVDG 434
Query: 150 IILLFCAVV--PGTLLLFRK 167
+L C P +L+RK
Sbjct: 435 TFVLSCVATGSPVPTILWRK 454
>gi|239748171 PREDICTED: similar to roundabout 1 isoform 2 [Homo
sapiens]
Length = 1615
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 17/140 (12%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTW---PPEFLGP-GEDPNGTLIIQ 94
P +V+LG FQC + + W R N + PP+ G L I
Sbjct: 321 PRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTIT 380
Query: 95 NVNKSHGGIYVCRVQEGNESYQQSCGTYLRVR-----QPPPRPFLDMGEGTKNRIITAEG 149
NV +S G Y+C Q N + YL V +PPP + +G N+ + +G
Sbjct: 381 NVQRSDVGYYIC--QTLNVAGSIITKAYLEVTDVIADRPPP----VIRQGPVNQTVAVDG 434
Query: 150 IILLFCAVV--PGTLLLFRK 167
+L C P +L+RK
Sbjct: 435 TFVLSCVATGSPVPTILWRK 454
>gi|4506569 roundabout 1 isoform a [Homo sapiens]
Length = 1651
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 17/140 (12%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTW---PPEFLGP-GEDPNGTLIIQ 94
P +V+LG FQC + + W R N + PP+ G L I
Sbjct: 357 PRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTIT 416
Query: 95 NVNKSHGGIYVCRVQEGNESYQQSCGTYLRVR-----QPPPRPFLDMGEGTKNRIITAEG 149
NV +S G Y+C Q N + YL V +PPP + +G N+ + +G
Sbjct: 417 NVQRSDVGYYIC--QTLNVAGSIITKAYLEVTDVIADRPPP----VIRQGPVNQTVAVDG 470
Query: 150 IILLFCAVV--PGTLLLFRK 167
+L C P +L+RK
Sbjct: 471 TFVLSCVATGSPVPTILWRK 490
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 38.5 bits (88), Expect = 0.005
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLH-----GNYTWPPEFLGPGEDPNGTLII 93
P S+ V GE A F+C + +TW + GNYT G P+ L I
Sbjct: 6277 PVSIDVIAGESADFECHVTGAQPMRITWSKDNKEIRPGGNYT----ITCVGNTPH--LRI 6330
Query: 94 QNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPP 129
V K G Y C Q N+ + C L V++PP
Sbjct: 6331 LKVGKGDSGQYTC--QATNDVGKDMCSAQLSVKEPP 6364
Score = 38.5 bits (88), Expect = 0.005
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 34 WMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWR---VLHGNYTWPPEFLGPGEDPNGT 90
++ K+ AS + GE +C + S V+W+R LH ++ + F+ +
Sbjct: 6366 FVKKLEASKVAKQGESIQLECKISGSPEIKVSWFRNDSELHESWKYNMSFI----NSVAL 6421
Query: 91 LIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPP 129
L I + G Y+C G SC T L V+ PP
Sbjct: 6422 LTINEASAEDSGDYICEAHNG--VGDASCSTALTVKAPP 6458
Score = 37.0 bits (84), Expect = 0.014
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 34 WMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGPGEDPNGTLII 93
++ K+ AS +V G+ + +C S V W+R H ++ D + +
Sbjct: 5425 FVKKLEASKIVKAGDSSRLECKIAGSPEIRVVWFRNEH-ELPASDKYRMTFIDSVAVIQM 5483
Query: 94 QNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPP-RPFLDMGEGTKNRIITAE 148
N++ G ++C Q N + SC T + V++PP F + E KN ++ E
Sbjct: 5484 NNLSTEDSGDFICEAQ--NPAGSTSCSTKVIVKEPPVFSSFPPIVETLKNAEVSLE 5537
Score = 35.0 bits (79), Expect = 0.052
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 45 SLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPP--EFLGPGEDPNGTLIIQNVNKSHGG 102
++ + H +C + VTW + PP ++ ED TL I G
Sbjct: 3656 AINKKVHLECQVDEDRKVTVTWSK---DGQKLPPGKDYKICFEDKIATLEIPLAKLKDSG 3712
Query: 103 IYVCRVQEGNESYQQSCGTYLRVRQPP 129
YVC NE+ SC + VR+PP
Sbjct: 3713 TYVCTAS--NEAGSSSCSATVTVREPP 3737
Score = 35.0 bits (79), Expect = 0.052
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLH-----GNYTWPPEFLGPGEDPNGTLII 93
P S+ ++LGE F+C + +TW + GNY + TL +
Sbjct: 7218 PVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTL------VENTATLTV 7271
Query: 94 QNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPP 129
V K G Y C N + + SC L V++PP
Sbjct: 7272 LKVGKGDAGQYTC--YASNIAGKDSCSAQLGVQEPP 7305
Score = 33.5 bits (75), Expect = 0.15
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 42 LMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGPGE-DPNGTLIIQNVNKSH 100
L++ G+ F+C + V+W+ L GN + G D T I +
Sbjct: 4871 LVLRNGQSTTFECQITGTPKIRVSWY--LDGNEITAIQKHGISFIDGLATFQISGARVEN 4928
Query: 101 GGIYVCRVQEGNESYQQSCGTYLRVRQPP 129
G YVC + N++ SC L+V++PP
Sbjct: 4929 SGTYVCEAR--NDAGTASCSIELKVKEPP 4955
Score = 33.5 bits (75), Expect = 0.15
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 86 DPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPPRPFLDMGEGTKNRII 145
D TL I++V+ H G Y C Q NES + C +L V++P + E K+ +
Sbjct: 5100 DSVATLQIRSVDNGHSGRYTC--QAKNESGVERCYAFLLVQEP-----AQIVEKAKSVDV 5152
Query: 146 TAEGIILLFCAVVPGT 161
T + + L C VV GT
Sbjct: 5153 TEKDPMTLEC-VVAGT 5167
Score = 33.1 bits (74), Expect = 0.20
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 46 LGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGIYV 105
+GE A QC + + ++W++ H P + ++ +L+I V+ S G Y
Sbjct: 7033 IGEPATLQCKVDGTPEIRISWYKE-HTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYS 7091
Query: 106 CRVQEGNESYQQSCGTYLRVRQPPP 130
C+ + S ++ R+ PP
Sbjct: 7092 CKADNSVGAVASSAVLVIKARKLPP 7116
Score = 33.1 bits (74), Expect = 0.20
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 40 ASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGPGEDPNG-TLIIQNVNK 98
A + V +G + H + P+ +++W + G EF+ + N TL I+N K
Sbjct: 27571 AQVTVRIGHNVHLELPYKGKPKPSISWLK--DGLPLKESEFVRFSKTENKITLSIKNAKK 27628
Query: 99 SHGGIY-------VCRV 108
HGG Y VCR+
Sbjct: 27629 EHGGKYTVILDNAVCRI 27645
Score = 32.0 bits (71), Expect = 0.44
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 44 VSLGEDAHFQCPHNSSNNANVTWWR---VLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSH 100
VS+G+ A QC + V+W++ L T+ F + TL+ V+ +
Sbjct: 7972 VSVGDSASLQCQLAGTPEIGVSWYKGDTKLRPTTTYKMHF----RNNVATLVFNQVDIND 8027
Query: 101 GGIYVCRVQEGNESYQQSCGTYLRVRQ 127
G Y+C+ + N + S T+L V++
Sbjct: 8028 SGEYICKAE--NSVGEVSASTFLTVQE 8052
Score = 31.2 bits (69), Expect = 0.75
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 34 WMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWW---RVLHGNYTWPPEFLGPGEDPNGT 90
++ KV S ++ GE A C S VTW+ + L + T F+ +
Sbjct: 3739 FVKKVDPSYLMLPGESARLHCKLKGSPVIQVTWFKNNKELSESNTVRMYFV----NSEAI 3794
Query: 91 LIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPP 129
L I +V G Y C + N+ SC T + +++PP
Sbjct: 3795 LDITDVKVEDSGSYSC--EAVNDVGSDSCSTEIVIKEPP 3831
Score = 29.3 bits (64), Expect = 2.9
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 38 VPASLMVSLGEDAHFQCPHNSSNNANVTW---WRVLHGNYTWPPEFLGPGEDPNGTLIIQ 94
+P+ + + G+ C VTW R +H F D TLII
Sbjct: 33334 LPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQG--RFHIENTDDLTTLIIM 33391
Query: 95 NVNKSHGGIYVCRVQEGNESYQQSCGTYLRVR 126
+V K GG+Y + GNE S + +R
Sbjct: 33392 DVQKQDGGLYTLSL--GNEFGSDSATVNIHIR 33421
Score = 28.5 bits (62), Expect = 4.9
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 42 LMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHG 101
L ++G+ QC + V+W++ PE+ + TL+ VN +
Sbjct: 6088 LEAAVGDSVSLQCQVAGTPEITVSWYKG-DTKLRPTPEYRTYFTNNVATLVFNKVNINDS 6146
Query: 102 GIYVCRVQEGNESYQQSCGTYLRVRQPPP 130
G Y C+ + + ++ RQ PP
Sbjct: 6147 GEYTCKAENSIGTASSKTVFRIQERQLPP 6175
>gi|28373126 contactin 4 isoform c precursor [Homo sapiens]
Length = 698
Score = 38.5 bits (88), Expect = 0.005
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 39 PASLMVSLGEDAHFQCP--HNSSNNANVTWWRVLH-------GNYTWPPEFLGPGEDPNG 89
P+S+ V++GE C H+ S + TW H G++ E +G G+D G
Sbjct: 176 PSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHF---ERVG-GQDSAG 231
Query: 90 TLIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPPRP 132
L+I+N+ H G YVC VQ + + S L VR PP P
Sbjct: 232 DLMIRNIQLKHAGKYVCMVQTSVD--RLSAAADLIVRGPPGPP 272
>gi|28373122 contactin 4 isoform a precursor [Homo sapiens]
Length = 1026
Score = 38.5 bits (88), Expect = 0.005
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 39 PASLMVSLGEDAHFQCP--HNSSNNANVTWWRVLH-------GNYTWPPEFLGPGEDPNG 89
P+S+ V++GE C H+ S + TW H G++ E +G G+D G
Sbjct: 504 PSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHF---ERVG-GQDSAG 559
Query: 90 TLIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPPRP 132
L+I+N+ H G YVC VQ + + S L VR PP P
Sbjct: 560 DLMIRNIQLKHAGKYVCMVQTSVD--RLSAAADLIVRGPPGPP 600
>gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens]
Length = 708
Score = 37.7 bits (86), Expect = 0.008
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGP 83
V GP QA P + V +GEDA F C + VTW R + LG
Sbjct: 308 VLFGPILQAK-----PEPVSVDVGEDASFSCAWRGNPLPRVTWTR------RGGAQVLGS 356
Query: 84 GEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG-TYLRVRQPP 129
G TL + +V G YVCR + G + L V PP
Sbjct: 357 G----ATLRLPSVGPEDAGDYVCRAEAGLSGLRGGAAEARLTVNAPP 399
>gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens]
Length = 583
Score = 37.7 bits (86), Expect = 0.008
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGP 83
V GP QA P + V +GEDA F C + VTW R + LG
Sbjct: 258 VLFGPILQAK-----PEPVSVDVGEDASFSCAWRGNPLPRVTWTR------RGGAQVLGS 306
Query: 84 GEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG-TYLRVRQPP 129
G TL + +V G YVCR + G + L V PP
Sbjct: 307 G----ATLRLPSVGPEDAGDYVCRAEAGLSGLRGGAAEARLTVNAPP 349
>gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens]
Length = 633
Score = 37.7 bits (86), Expect = 0.008
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGP 83
V GP QA P + V +GEDA F C + VTW R + LG
Sbjct: 308 VLFGPILQAK-----PEPVSVDVGEDASFSCAWRGNPLPRVTWTR------RGGAQVLGS 356
Query: 84 GEDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCG-TYLRVRQPP 129
G TL + +V G YVCR + G + L V PP
Sbjct: 357 G----ATLRLPSVGPEDAGDYVCRAEAGLSGLRGGAAEARLTVNAPP 399
>gi|156104876 fms-related tyrosine kinase 1 isoform 1 precursor
[Homo sapiens]
Length = 1338
Score = 37.4 bits (85), Expect = 0.011
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 44 VSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGPGEDPNGTLIIQNVNKSHGGI 103
V++ C N +TW++ H P LGPG + TL I+ V + G+
Sbjct: 672 VAISSSTTLDCHANGVPEPQITWFKNNHKIQQEPGIILGPG---SSTLFIERVTEEDEGV 728
Query: 104 YVCRVQEGNESYQQSCGTYLRVRQPPPRPFLDM 136
Y C+ S + S YL V+ + L++
Sbjct: 729 YHCKATNQKGSVESS--AYLTVQGTSDKSNLEL 759
>gi|193083163 roundabout, axon guidance receptor, homolog 2 isoform
ROBO2a [Homo sapiens]
Length = 1394
Score = 37.0 bits (84), Expect = 0.014
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 11/124 (8%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGPGE----DPNGTLIIQ 94
P +V+ G F C + V W + N +P + P P G L I
Sbjct: 336 PRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTIT 395
Query: 95 NVNKSHGGIYVCR---VQEGNESYQQSCGTYLRVRQPPPRPFLDMGEGTKNRIITAEGII 151
N+ +S G Y+C+ V + Q T + +PPP + +G N+ + +G
Sbjct: 396 NIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPP----IILQGPANQTLAVDGTA 451
Query: 152 LLFC 155
LL C
Sbjct: 452 LLKC 455
>gi|61888896 roundabout, axon guidance receptor, homolog 2 isoform
ROBO2b [Homo sapiens]
Length = 1378
Score = 37.0 bits (84), Expect = 0.014
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 11/124 (8%)
Query: 39 PASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGPGE----DPNGTLIIQ 94
P +V+ G F C + V W + N +P + P P G L I
Sbjct: 320 PRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTIT 379
Query: 95 NVNKSHGGIYVCR---VQEGNESYQQSCGTYLRVRQPPPRPFLDMGEGTKNRIITAEGII 151
N+ +S G Y+C+ V + Q T + +PPP + +G N+ + +G
Sbjct: 380 NIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPP----IILQGPANQTLAVDGTA 435
Query: 152 LLFC 155
LL C
Sbjct: 436 LLKC 439
>gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens]
Length = 600
Score = 36.2 bits (82), Expect = 0.023
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGP 83
VY GP M P SL+V LG DA F C + + + W + G+ G
Sbjct: 331 VYFGPR-----MTTEPQSLLVDLGSDAIFSCAWTGNPSLTIVWMK--RGS--------GV 375
Query: 84 GEDPNGTLIIQNVNKSHGGIYVCR 107
TL +++V + G YVCR
Sbjct: 376 VLSNEKTLTLKSVRQEDAGKYVCR 399
>gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens]
Length = 778
Score = 36.2 bits (82), Expect = 0.023
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 24 VYLGPGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGP 83
VY GP M P SL+V LG DA F C + + + W + G+ G
Sbjct: 331 VYFGPR-----MTTEPQSLLVDLGSDAIFSCAWTGNPSLTIVWMK--RGS--------GV 375
Query: 84 GEDPNGTLIIQNVNKSHGGIYVCR 107
TL +++V + G YVCR
Sbjct: 376 VLSNEKTLTLKSVRQEDAGKYVCR 399
>gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]
Length = 373
Score = 35.8 bits (81), Expect = 0.031
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 47 GEDAHFQCPHNSSNNANVTWWRVLHG----NYTWPPEFLGPGEDPNGTLIIQNVNKSHGG 102
G D QC +S V +W+ + + PP+ P G +++QN+ S+ G
Sbjct: 146 GSDLTLQCESSSGTEPIVYYWQRIREKEGEDERLPPKSRIDYNHP-GRVLLQNLTMSYSG 204
Query: 103 IYVCRVQEGNESYQQSCGTYLRVRQPPPRPFLDMGEGTKNRIITAEGIILLFCAVVPGTL 162
+Y C GNE+ ++SC + V+ + M G I+ G +L+F V L
Sbjct: 205 LYQCTA--GNEAGKESCVVRVTVQYVQS---IGMVAGAVTGIVA--GALLIFLLV---WL 254
Query: 163 LLFRK---RWQNEK 173
L+ RK R++ E+
Sbjct: 255 LIRRKDKERYEEEE 268
>gi|144226847 obscurin-like 1 [Homo sapiens]
Length = 1896
Score = 35.0 bits (79), Expect = 0.052
Identities = 32/109 (29%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
Query: 28 PGCQALWMHKVPASLMVSLGEDAHFQCPHNSSNNANVTWWRVLHGNYTWPPEFLGPG--- 84
P Q L + P+ L V+ GE C S A V W ++ P G G
Sbjct: 1169 PPVQFLALETTPSPLCVAPGEPVVLSC-ELSRAGAPVVW------SHNGRPVQEGEGLEL 1221
Query: 85 --EDPNGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPPR 131
E P L IQ +H G+Y C Q G S ++V +PP R
Sbjct: 1222 HAEGPRRVLCIQAAGPAHAGLYTC--QSGAAPGAPSLSFTVQVAEPPVR 1268
>gi|148664224 adhesion molecule, interacts with CXADR antigen 1
isoform 2 [Homo sapiens]
Length = 384
Score = 35.0 bits (79), Expect = 0.052
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 88 NGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPP-------RPFLDMGEGT 140
+G++++Q V +S GG Y C + GN ++++ ++ +P RP + G
Sbjct: 206 DGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGG--- 262
Query: 141 KNRIITAEGIILLFCAVVPGTLLLFRKRWQNE 172
N+++ GI+ ++P +L+ +K N+
Sbjct: 263 -NQLVIIVGIVCATILLLPVLILIVKKTCGNK 293
Score = 27.7 bits (60), Expect = 8.3
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 88 NGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPPRPFL 134
+G+L++Q+V ++ G Y+C ++ ES L V P+ +
Sbjct: 88 DGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELM 134
>gi|148664207 adhesion molecule, interacts with CXADR antigen 1
isoform 1 [Homo sapiens]
Length = 394
Score = 35.0 bits (79), Expect = 0.052
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 88 NGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPP-------RPFLDMGEGT 140
+G++++Q V +S GG Y C + GN ++++ ++ +P RP + G
Sbjct: 216 DGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGG--- 272
Query: 141 KNRIITAEGIILLFCAVVPGTLLLFRKRWQNE 172
N+++ GI+ ++P +L+ +K N+
Sbjct: 273 -NQLVIIVGIVCATILLLPVLILIVKKTCGNK 303
Score = 27.7 bits (60), Expect = 8.3
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 88 NGTLIIQNVNKSHGGIYVCRVQEGNESYQQSCGTYLRVRQPPPRPFL 134
+G+L++Q+V ++ G Y+C ++ ES L V P+ +
Sbjct: 98 DGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELM 144
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.140 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,816,540
Number of Sequences: 37866
Number of extensions: 528513
Number of successful extensions: 1659
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 1387
Number of HSP's gapped (non-prelim): 440
length of query: 226
length of database: 18,247,518
effective HSP length: 99
effective length of query: 127
effective length of database: 14,498,784
effective search space: 1841345568
effective search space used: 1841345568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.