Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CASP14 Sequence: fasta or formatted (242aa) NCBI GI: 6912286
Description:

caspase 14 precursor

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         17           1
 C cysteine            2.1          5           1
 D aspartate           5.4         13           1
 E glutamate          11.6         28           3
 F phenylalanine       3.7          9           1
 G glycine             5.8         14           2
 H histidine           2.1          5           1
 I isoleucine          4.5         11           2
 K lysine              6.6         16           1
 L leucine             9.5         23           2
 M methionine          3.3          8           1
 N asparagine          2.5          6           2
 P proline             3.3          8           1
 Q glutamine           5.8         14           2
 R arginine            7.4         18           2
 S serine              4.5         11           1
 T threonine           5.8         14           1
 V valine              6.2         15           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   caspase 14 precursor 
LOC197350             0.324   PREDICTED: hypothetical protein LOC197350 
LOC197350             0.324   PREDICTED: hypothetical protein LOC197350 
CASP2                 0.179   caspase 2 isoform 1 preproprotein 
CASP3                 0.168   caspase 3 preproprotein 
CASP3                 0.168   caspase 3 preproprotein 
CASP7                 0.164   caspase 7 isoform delta 
CASP7                 0.164   caspase 7 isoform alpha 
CASP7                 0.164   caspase 7 isoform alpha precursor 
CASP10                0.151   caspase 10 isoform d preproprotein 
CASP10                0.151   caspase 10 isoform a preproprotein 
CASP8                 0.151   caspase 8 isoform G precursor 
CASP8                 0.151   caspase 8 isoform C precursor 
CASP8                 0.151   caspase 8 isoform C precursor 
CASP8                 0.151   caspase 8 isoform B precursor 
CASP8                 0.151   caspase 8 isoform A precursor 
CASP10                0.133   caspase 10 isoform b preproprotein 
CASP9                 0.133   caspase 9 isoform alpha preproprotein 
CASP6                 0.125   caspase 6 isoform alpha preproprotein 
CASP5                 0.123   caspase 5 isoform f precursor 
CASP5                 0.123   caspase 5 isoform c 
CASP5                 0.123   caspase 5 isoform b precursor 
CASP5                 0.123   caspase 5 isoform a precursor 
CASP1                 0.120   caspase 1 isoform gamma precursor 
CASP1                 0.120   caspase 1 isoform alpha precursor 
CASP1                 0.120   caspase 1 isoform beta precursor 
CASP1                 0.107   caspase 1 isoform delta 
CASP6                 0.103   caspase 6 isoform beta 
CASP4                 0.103   caspase 4 isoform gamma precursor 
CASP4                 0.103   caspase 4 isoform alpha precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press