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Search of human proteins with 4502327
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
(339 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 657 0.0
gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Hom... 242 4e-64
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 139 5e-33
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 109 3e-24
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 100 2e-21
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof... 100 3e-21
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof... 100 3e-21
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 94 1e-19
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof... 89 4e-18
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 87 2e-17
gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Hom... 79 6e-15
gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... 71 2e-12
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [... 71 2e-12
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 68 1e-11
gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 67 2e-11
gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 67 2e-11
gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 67 2e-11
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 65 1e-10
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 65 1e-10
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 64 2e-10
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 64 2e-10
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 64 3e-10
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 64 3e-10
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 49 5e-06
gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... 40 0.002
gi|239757545 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|239752059 PREDICTED: hypothetical protein XP_002348078 [Homo ... 32 1.1
gi|239746544 PREDICTED: hypothetical protein XP_002343774 [Homo ... 32 1.1
gi|14110395 X-box binding protein 1 isoform XBP1(U) [Homo sapiens] 31 1.4
gi|118640873 X-box binding protein 1 isoform XBP1(S) [Homo sapiens] 31 1.4
>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
Length = 339
Score = 657 bits (1696), Expect = 0.0
Identities = 339/339 (100%), Positives = 339/339 (100%)
Query: 1 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG 60
MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
Sbjct: 1 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG 60
Query: 61 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS 120
PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
Sbjct: 61 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS 120
Query: 121 DKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAID 180
DKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAID
Sbjct: 121 DKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAID 180
Query: 181 GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSA 240
GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSA
Sbjct: 181 GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSA 240
Query: 241 RVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVD 300
RVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVD
Sbjct: 241 RVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVD 300
Query: 301 LVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
LVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE
Sbjct: 301 LVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
>gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Homo
sapiens]
Length = 261
Score = 242 bits (617), Expect = 4e-64
Identities = 127/280 (45%), Positives = 182/280 (65%), Gaps = 32/280 (11%)
Query: 61 PAPKRGYSSEMKTE-DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALK 119
P RG +S+ E++VR L ++GI + +NR +N+L + L + + L+
Sbjct: 13 PLRARGCASDGAAGGSEIQVRALAGPDQGITEILMNRPSARNALGNVFVSELLETLAQLR 72
Query: 120 SDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAI 179
D++VR ++ RS V G+FCAGADLKER +MS +EVG FV ++R ++NDIA
Sbjct: 73 EDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFVQRLRGLMNDIA---------- 122
Query: 180 DGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFS 239
SSA MGL+ET ++PG GGTQRLPR +G++LAKELIF+
Sbjct: 123 ---------------------SSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFT 161
Query: 240 ARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEV 299
R L G EA +GL++H + QN+EGDAAY++A LA+E LPQ P+A+R+ K+AI++G EV
Sbjct: 162 GRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGTEV 221
Query: 300 DLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
D+ +G+AIE CYAQ IPT+DRLEG+ AF+EKR P++ G+
Sbjct: 222 DIASGMAIEGMCYAQNIPTRDRLEGMAAFREKRTPKFVGK 261
>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
precursor [Homo sapiens]
Length = 290
Score = 139 bits (349), Expect = 5e-33
Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 19/293 (6%)
Query: 47 PAIWAQGWVPAAGGPAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKN 106
P + W P A G E + +N + ++ +NR N+L
Sbjct: 17 PPVRCPAWRPFASG------------ANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDG 64
Query: 107 LIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVIN 166
LI L++A+ + D V I++ F AGAD+KE +S + + SK +
Sbjct: 65 LIDELNQALKTFEEDPAVGAIVLTGGDKA-FAAGADIKEMQNLSFQDC--YSSKFLKHWD 121
Query: 167 DIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPR 226
+ + P IAA++G A GGG ELA+ CDI A A+ E + IPG GGTQRL R
Sbjct: 122 HLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTR 181
Query: 227 AIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAM 286
A+G SLA E++ + + ++AK GL+S + + +A+ A + + +
Sbjct: 182 AVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPV----ETLVEEAIQCAEKIASNSKIVV 237
Query: 287 RVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
+AK ++N E+ L G +E+ + T T DR EG+ AF EKR +K +
Sbjct: 238 AMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANFKDQ 290
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 109 bits (273), Expect = 3e-24
Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 9/233 (3%)
Query: 89 IVVLGINRAYGK-NSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERA 147
+ V+ IN K N+LSK L S+ ++ + + ++R+ ++ S PG F AGAD+ A
Sbjct: 49 VAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLA 108
Query: 148 KMSS-SEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAK-- 204
+ EV + + ++ + P +AAI+G LGGGLE+A++C R+A K
Sbjct: 109 ACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
Query: 205 MGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEG 264
+G E L +PG GGTQRLP+ +G+ A +++ + R + AK +GL+ ++E G
Sbjct: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPG 228
Query: 265 DAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIP 317
+ + E+L + VA+ AK ++ + GL + YA TIP
Sbjct: 229 ---LKPPEERTIEYLEE--VAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
Length = 328
Score = 100 bits (248), Expect = 2e-21
Identities = 90/324 (27%), Positives = 138/324 (42%), Gaps = 35/324 (10%)
Query: 21 RLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGGPAPKRGYSSEMKTEDELRVR 80
RL + L LRL GS A A A G AP Y S T + V
Sbjct: 18 RLTGSNYPGLSISLRLTGSSAQEEASGV---------ALGEAPDHSYESLRVTSAQKHVL 68
Query: 81 HLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAG 140
H++ +NR +N+++K + + + + + D R ++I S +F AG
Sbjct: 69 HVQ----------LNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVI-SGAGKMFTAG 117
Query: 141 ADLKERAKMSSSEVGPFVSKIRAVINDIAN-----------LPVPTIAAIDGLALGGGLE 189
DL + A G V++I + DI P P IAA+ G +GGG++
Sbjct: 118 IDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVD 177
Query: 190 LALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIG-MSLAKELIFSARVLDGKEA 248
L ACDIR A A + E + + G QRLP+ IG SL EL F+AR + EA
Sbjct: 178 LVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEA 237
Query: 249 KAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIE 308
GL+S V + + AL LA E + PVA++ K+ + + + L
Sbjct: 238 LGSGLVSRVF---PDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYV 294
Query: 309 EACYAQTIPTKDRLEGLLAFKEKR 332
+ + T+D ++ + A E +
Sbjct: 295 ASWNMSMLQTQDLVKSVQATTENK 318
>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
1 [Homo sapiens]
Length = 301
Score = 99.8 bits (247), Expect = 3e-21
Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 3/228 (1%)
Query: 82 LEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGA 141
L++E+ GI +L +N N+ S ++ L + V L++ + + +I+R F +G+
Sbjct: 51 LQKEDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRG-AKNTFSSGS 109
Query: 142 DLKERAKMSSSEVGPFVSK-IRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAA 200
DL + + E G V ++ + LP+ ++A + G ALGGG E ACD R+
Sbjct: 110 DLNAVKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMT 169
Query: 201 SSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQ 260
+K+ V ++ IIP GGT RL IG A +++ A LD K A +G++ VL+
Sbjct: 170 PESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQS 229
Query: 261 NQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIE 308
+ E + +A + ++F+ P +R K ++ G E+ L L E
Sbjct: 230 SDE-TKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNE 276
>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
5 [Homo sapiens]
Length = 307
Score = 99.8 bits (247), Expect = 3e-21
Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 3/228 (1%)
Query: 82 LEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGA 141
L++E+ GI +L +N N+ S ++ L + V L++ + + +I+R F +G+
Sbjct: 57 LQKEDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRG-AKNTFSSGS 115
Query: 142 DLKERAKMSSSEVGPFVSK-IRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAA 200
DL + + E G V ++ + LP+ ++A + G ALGGG E ACD R+
Sbjct: 116 DLNAVKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMT 175
Query: 201 SSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQ 260
+K+ V ++ IIP GGT RL IG A +++ A LD K A +G++ VL+
Sbjct: 176 PESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQS 235
Query: 261 NQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIE 308
+ E + +A + ++F+ P +R K ++ G E+ L L E
Sbjct: 236 SDE-TKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNE 282
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 94.4 bits (233), Expect = 1e-19
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 101 NSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSK 160
N++S L++ + + + D ++ I+I G F AGAD++ S F
Sbjct: 22 NAISTTLLRDIKEGLQKAVIDHTIKAIVICG-AEGKFSAGADIR-----GFSAPRTFGLT 75
Query: 161 IRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGG 220
+ V+++I P +AAI G+A GGGLELAL C R+A + A++GL E L ++PG G
Sbjct: 76 LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARG 135
Query: 221 TQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDA 266
TQ LPR G+ A +LI S R + EA +G++ V+ + +A
Sbjct: 136 TQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEEA 181
>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
3 [Homo sapiens]
Length = 226
Score = 89.4 bits (220), Expect = 4e-18
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
Query: 107 LIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSK-IRAVI 165
++++L K ++ L++ + + +I+R F +G+DL + + E G V ++ +
Sbjct: 2 MLQLLEKVIE-LENWTEGKGLIVRG-AKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTL 59
Query: 166 NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLP 225
LP+ ++A + G ALGGG E ACD R+ +K+ V ++ IIP GGT RL
Sbjct: 60 TRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLV 119
Query: 226 RAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVA 285
IG A +++ A LD K A +G++ VL+ + E + +A + ++F+ P
Sbjct: 120 EIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDE-TKSLEEAQEWLKQFIQGPPEV 178
Query: 286 MRVAKLAINQGMEVDLVTGLAIE 308
+R K ++ G E+ L L E
Sbjct: 179 IRALKKSVCSGRELYLEEALQNE 201
>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
sapiens]
Length = 303
Score = 87.4 bits (215), Expect = 2e-17
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 25/302 (8%)
Query: 44 RAGPAIWAQGWVPAAGGPAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSL 103
R GP WAQ +PA G R L+ GI + ++ +N+L
Sbjct: 19 RRGP--WAQ--LPARFCSRDPAGAGRRESEPRPTSARQLD----GIRNIVLSNPKKRNTL 70
Query: 104 SKNLIKMLSKAV--DALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS----SEVGPF 157
S ++K L + DA +D KV III +E P +F +G DLKE + +EV
Sbjct: 71 SLAMLKSLQSDILHDADSNDLKV--IIISAEGP-VFSSGHDLKELTEEQGRDYHAEVFQT 127
Query: 158 VSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPG 217
SK V+ I N PVP IA ++GLA G +L +CDI VA+ + + +
Sbjct: 128 CSK---VMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCS 184
Query: 218 GGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLARE 277
G L RA+ +A E++F+ + +EA GL+S V+ + + + R +AR+
Sbjct: 185 TPGV-ALARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMR----IARK 239
Query: 278 FLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYK 337
+ + K + + DL T + + +D EG+ AF +KR P +
Sbjct: 240 IASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPVWS 299
Query: 338 GE 339
E
Sbjct: 300 HE 301
>gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Homo
sapiens]
Length = 302
Score = 79.0 bits (193), Expect = 6e-15
Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 25/308 (8%)
Query: 33 GLRLPGSLAGRRAGPAIWAQGWVPAAGGPAPKRGYSSEMKTEDELRVRHLEEENRGIVVL 92
G RLPG+ GR AAGG R + S+ RV + G+ V+
Sbjct: 18 GARLPGAALGRTER----------AAGGGDGARRFGSQ-------RVLVEPDAGAGVAVM 60
Query: 93 GINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSS 152
NSLS + L +++ L++DK R +I+ S+ PG+F AG DL E S +
Sbjct: 61 KFKNP-PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPA 119
Query: 153 EVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAK--MGLVET 210
+ ++ + + + ++AI+G GG +AL CD R+ A + + +GL ET
Sbjct: 120 HYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNET 179
Query: 211 KLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRK 270
+L II L IG A+ + + EA VG++ V+ + Q
Sbjct: 180 QLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQ----VQST 235
Query: 271 ALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKE 330
AL +++ A ++ K + + LVT + + I +KD ++ L
Sbjct: 236 ALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFI-SKDSIQKSLQMYL 294
Query: 331 KRPPRYKG 338
+R KG
Sbjct: 295 ERLKEEKG 302
>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
Length = 338
Score = 70.9 bits (172), Expect = 2e-12
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 91 VLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLK--ERAK 148
V+ +NR N+L+ N+I+ + + + D + III+ FCAG D++ A+
Sbjct: 48 VITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAE 107
Query: 149 MSSSEVGPFVSKIRAVIND-IANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGL 207
+ ++ P + ++N+ + + P +A I G+ +GGG+ L++ RVA +
Sbjct: 108 KAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAM 167
Query: 208 VETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQ 262
ET + + P GG LPR G L L + L G++ G+ +H ++ +
Sbjct: 168 PETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFVDSEK 221
>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
[Homo sapiens]
Length = 386
Score = 70.9 bits (172), Expect = 2e-12
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 91 VLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLK--ERAK 148
V+ +NR N+L+ N+I+ + + + D + III+ FCAG D++ A+
Sbjct: 48 VITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAE 107
Query: 149 MSSSEVGPFVSKIRAVIND-IANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGL 207
+ ++ P + ++N+ + + P +A I G+ +GGG+ L++ RVA +
Sbjct: 108 KAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAM 167
Query: 208 VETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQ 262
ET + + P GG LPR G L L + L G++ G+ +H ++ +
Sbjct: 168 PETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFVDSEK 221
>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
Length = 506
Score = 68.2 bits (165), Expect = 1e-11
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 64 KRGYSSEMKTEDELRVRHL---EEENRGIVVLGINRAYGKNSLSKNLIKMLSKAV-DALK 119
KR S + E R R + +EE ++L ++ N+L+ ++K + +A+ +A
Sbjct: 234 KRLRYSVRQNESNCRFRDIVVRKEEGFTHILLS-SQTSDNNALTPEIMKEVRRALCNAAT 292
Query: 120 SDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPV----PT 175
D K +++ S V +FC+G D SS+ ++I I D + P
Sbjct: 293 DDSK---LLLLSAVGSVFCSGLDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPI 349
Query: 176 IAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKE 235
+ AI+G ALG G + CDI A+ A + + P G + P+ +G++LA E
Sbjct: 350 VVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANE 409
Query: 236 LIFSARVLDGKEAKAVGLISHV 257
++F R L +EA + GL+S V
Sbjct: 410 MLFCGRKLTAQEACSRGLVSQV 431
>gi|221307494 chromodomain protein, Y chromosome-like isoform a
[Homo sapiens]
Length = 544
Score = 67.4 bits (163), Expect = 2e-11
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 18/250 (7%)
Query: 61 PAPKRGYSSEMKTEDELRVRHL--EEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDAL 118
P KR S +TE R R + +++ +L ++ NSL+ +++ + A+
Sbjct: 269 PFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTA 328
Query: 119 KSDKKVRTIIIRSEVPGIFCAGAD-------LKERAKMSSSEVGPFVSKIRAVINDIANL 171
+D +++ S V +FC G D L + K S+++ IR +N
Sbjct: 329 AADDS--KLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMA---EAIRNFVNTFIQF 383
Query: 172 PVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMS 231
P I A++G A+G G + CD+ A A T P G T P+ +G +
Sbjct: 384 KKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGA 443
Query: 232 LAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKL 291
A E++ S R L +EA GL+S V ++ + +E PV + +K
Sbjct: 444 SANEMLLSGRKLTAQEACGKGLVSQVFWPG----TFTQEVMVRIKELASCNPVVLEESKA 499
Query: 292 AINQGMEVDL 301
+ M+++L
Sbjct: 500 LVRCNMKMEL 509
>gi|221136756 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 67.4 bits (163), Expect = 2e-11
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 18/250 (7%)
Query: 61 PAPKRGYSSEMKTEDELRVRHL--EEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDAL 118
P KR S +TE R R + +++ +L ++ NSL+ +++ + A+
Sbjct: 137 PFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTA 196
Query: 119 KSDKKVRTIIIRSEVPGIFCAGAD-------LKERAKMSSSEVGPFVSKIRAVINDIANL 171
+D +++ S V +FC G D L + K S+++ IR +N
Sbjct: 197 AADDS--KLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMA---EAIRNFVNTFIQF 251
Query: 172 PVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMS 231
P I A++G A+G G + CD+ A A T P G T P+ +G +
Sbjct: 252 KKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGA 311
Query: 232 LAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKL 291
A E++ S R L +EA GL+S V ++ + +E PV + +K
Sbjct: 312 SANEMLLSGRKLTAQEACGKGLVSQVFWPG----TFTQEVMVRIKELASCNPVVLEESKA 367
Query: 292 AINQGMEVDL 301
+ M+++L
Sbjct: 368 LVRCNMKMEL 377
>gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 67.4 bits (163), Expect = 2e-11
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 18/250 (7%)
Query: 61 PAPKRGYSSEMKTEDELRVRHL--EEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDAL 118
P KR S +TE R R + +++ +L ++ NSL+ +++ + A+
Sbjct: 137 PFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTA 196
Query: 119 KSDKKVRTIIIRSEVPGIFCAGAD-------LKERAKMSSSEVGPFVSKIRAVINDIANL 171
+D +++ S V +FC G D L + K S+++ IR +N
Sbjct: 197 AADDS--KLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMA---EAIRNFVNTFIQF 251
Query: 172 PVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMS 231
P I A++G A+G G + CD+ A A T P G T P+ +G +
Sbjct: 252 KKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGA 311
Query: 232 LAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKL 291
A E++ S R L +EA GL+S V ++ + +E PV + +K
Sbjct: 312 SANEMLLSGRKLTAQEACGKGLVSQVFWPG----TFTQEVMVRIKELASCNPVVLEESKA 367
Query: 292 AINQGMEVDL 301
+ M+++L
Sbjct: 368 LVRCNMKMEL 377
>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
[Homo sapiens]
Length = 554
Score = 64.7 bits (156), Expect = 1e-10
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 27/255 (10%)
Query: 96 RAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGAD-------LKERAK 148
R+ KN+L+ +IK + A+++ +D +++ S +FC G D L+
Sbjct: 302 RSTEKNALNTEVIKEIVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 359
Query: 149 MSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLV 208
+S E+ V I+ +N P + +++G A+G G + CD+ A A
Sbjct: 360 TASLEM---VDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 416
Query: 209 ETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAY 268
T P G + P+ +G + A E++ + R L +EA A GL+S V
Sbjct: 417 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTG----TFT 472
Query: 269 RKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEAC--------YAQTIPTKD 320
++ + +E P+ + K + ++++L A E C AQ I +
Sbjct: 473 QEVMIQIKELASYNPIVLEECKALVRCNIKLELEQ--ANERECEVLRKIWSSAQGIESML 530
Query: 321 RLEGLLAFKEKRPPR 335
++ LL +K PPR
Sbjct: 531 KIP-LLGYKAAFPPR 544
>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
sapiens]
Length = 554
Score = 64.7 bits (156), Expect = 1e-10
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 27/255 (10%)
Query: 96 RAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGAD-------LKERAK 148
R+ KN+L+ +IK + A+++ +D +++ S +FC G D L+
Sbjct: 302 RSTEKNALNTEVIKEIVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 359
Query: 149 MSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLV 208
+S E+ V I+ +N P + +++G A+G G + CD+ A A
Sbjct: 360 TASLEM---VDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 416
Query: 209 ETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAY 268
T P G + P+ +G + A E++ + R L +EA A GL+S V
Sbjct: 417 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTG----TFT 472
Query: 269 RKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEAC--------YAQTIPTKD 320
++ + +E P+ + K + ++++L A E C AQ I +
Sbjct: 473 QEVMIQIKELASYNPIVLEECKALVRCNIKLELEQ--ANERECEVLRKIWSSAQGIESML 530
Query: 321 RLEGLLAFKEKRPPR 335
++ LL +K PPR
Sbjct: 531 KIP-LLGYKAAFPPR 544
>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
Length = 541
Score = 63.9 bits (154), Expect = 2e-10
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 59 GGPAPKRGYSSEMKTEDELRVRHL---EEENRGIVVLGINRAYGKNSLSKNLIKMLSKAV 115
G P K+ + + TE + R + +E+ +VL R+ KN+L+ +IK + A+
Sbjct: 264 GQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVLS-TRSTEKNALNTEVIKEMVNAL 322
Query: 116 DALKSDKKVRTIIIRSEVPGIFCAGAD-------LKERAKMSSSEVGPFVSKIRAVINDI 168
++ +D +++ S +FC G D L+ +S E+ V I+ +N
Sbjct: 323 NSAAADDS--KLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEM---VDTIKNFVNTF 377
Query: 169 ANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAI 228
P + +++G A+G G + CD+ A A T P G + P+ +
Sbjct: 378 IQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMM 437
Query: 229 GMSLAKELIFSARVLDGKEAKAVGLISHV 257
G + A E++ + R L +EA A GL+S V
Sbjct: 438 GKASANEMLIAGRKLTAREACAKGLVSQV 466
>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
Length = 541
Score = 63.9 bits (154), Expect = 2e-10
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 59 GGPAPKRGYSSEMKTEDELRVRHL---EEENRGIVVLGINRAYGKNSLSKNLIKMLSKAV 115
G P K+ + + TE + R + +E+ +VL R+ KN+L+ +IK + A+
Sbjct: 264 GQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVLS-TRSTEKNALNTEVIKEMVNAL 322
Query: 116 DALKSDKKVRTIIIRSEVPGIFCAGAD-------LKERAKMSSSEVGPFVSKIRAVINDI 168
++ +D +++ S +FC G D L+ +S E+ V I+ +N
Sbjct: 323 NSAAADDS--KLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEM---VDTIKNFVNTF 377
Query: 169 ANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAI 228
P + +++G A+G G + CD+ A A T P G + P+ +
Sbjct: 378 IQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMM 437
Query: 229 GMSLAKELIFSARVLDGKEAKAVGLISHV 257
G + A E++ + R L +EA A GL+S V
Sbjct: 438 GKASANEMLIAGRKLTAREACAKGLVSQV 466
>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
a [Homo sapiens]
Length = 540
Score = 63.5 bits (153), Expect = 3e-10
Identities = 52/244 (21%), Positives = 103/244 (42%), Gaps = 16/244 (6%)
Query: 96 RAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGAD-------LKERAK 148
R+ KN+L+ +IK + A+++ +D +++ S +FC G D L+
Sbjct: 302 RSTEKNALNTEVIKEIVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 359
Query: 149 MSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLV 208
+S E+ V I+ +N P + +++G A+G G + CD+ A A
Sbjct: 360 TASLEM---VDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 416
Query: 209 ETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAY 268
T P G + P+ +G + A E++ + R L +EA A GL+S V
Sbjct: 417 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTG----TFT 472
Query: 269 RKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAF 328
++ + +E P+ + K + ++++L E + + +E +L +
Sbjct: 473 QEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKY 532
Query: 329 KEKR 332
E +
Sbjct: 533 VENK 536
>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
sapiens]
Length = 540
Score = 63.5 bits (153), Expect = 3e-10
Identities = 52/244 (21%), Positives = 103/244 (42%), Gaps = 16/244 (6%)
Query: 96 RAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGAD-------LKERAK 148
R+ KN+L+ +IK + A+++ +D +++ S +FC G D L+
Sbjct: 302 RSTEKNALNTEVIKEIVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 359
Query: 149 MSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLV 208
+S E+ V I+ +N P + +++G A+G G + CD+ A A
Sbjct: 360 TASLEM---VDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 416
Query: 209 ETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAY 268
T P G + P+ +G + A E++ + R L +EA A GL+S V
Sbjct: 417 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTG----TFT 472
Query: 269 RKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAF 328
++ + +E P+ + K + ++++L E + + +E +L +
Sbjct: 473 QEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKY 532
Query: 329 KEKR 332
E +
Sbjct: 533 VENK 536
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 49.3 bits (116), Expect = 5e-06
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 88 GIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERA 147
GI + NR KN+++ + + +A+ A D + T++ + + +G DL
Sbjct: 119 GITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNG--DYYSSGNDLTNFT 176
Query: 148 KMSSSEVGPFVSK----IRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSA 203
+ V +R + + P P IA ++G A+G + L D A+ A
Sbjct: 177 DIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRA 236
Query: 204 KMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQE 263
+ L P G + P+ + + A E++ + L EA A GL++ V
Sbjct: 237 TFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFP---- 292
Query: 264 GDAAYRKAL-DLAREFLPQGPVAMRVAKLAINQ 295
D+ ++K + + F P A+R++K I +
Sbjct: 293 -DSTFQKEVWTRLKAFAKLPPNALRISKEVIRK 324
>gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo
sapiens]
Length = 227
Score = 40.4 bits (93), Expect = 0.002
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 161 IRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGG 220
+R + + P P IA ++G A+G + L D A+ A + L P G
Sbjct: 57 LREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCS 116
Query: 221 TQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKAL-DLAREFL 279
+ P+ + + A E++ + L EA A GL++ V D+ ++K + + F
Sbjct: 117 SYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFP-----DSTFQKEVWTRLKAFA 171
Query: 280 PQGPVAMRVAKLAINQ 295
P A+R++K I +
Sbjct: 172 KLPPNALRISKEVIRK 187
>gi|239757545 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 15 LHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGGPAPKRGYSSEMKTE 74
+H G+ L+ C A L P LRLP G RAG I A+ A GP G S E
Sbjct: 55 VHPSGS-LLPVCPALLVPVLRLPVGHPGIRAGVNIQARA---EAAGPRAWAGRGSRQPLE 110
Query: 75 DELRVRHLE 83
+ V E
Sbjct: 111 PDAEVAAAE 119
>gi|239752059 PREDICTED: hypothetical protein XP_002348078 [Homo
sapiens]
Length = 145
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 15 LHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGGPAPKRGYSSEMKTE 74
+H G+ L+ C A L P LRLP G RAG I A+ A GP G S E
Sbjct: 55 VHPSGS-LLPVCPALLVPVLRLPVGHPGIRAGVNIQARA---EAAGPRAWAGRGSRQPLE 110
Query: 75 DELRVRHLE 83
+ V E
Sbjct: 111 PDAEVAAAE 119
>gi|239746544 PREDICTED: hypothetical protein XP_002343774 [Homo
sapiens]
Length = 145
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 15 LHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGGPAPKRGYSSEMKTE 74
+H G+ L+ C A L P LRLP G RAG I A+ A GP G S E
Sbjct: 55 VHPSGS-LLPVCPALLVPVLRLPVGHPGIRAGVNIQARA---EAAGPRAWAGRGSRQPLE 110
Query: 75 DELRVRHLE 83
+ V E
Sbjct: 111 PDAEVAAAE 119
>gi|14110395 X-box binding protein 1 isoform XBP1(U) [Homo sapiens]
Length = 261
Score = 31.2 bits (69), Expect = 1.4
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 37 PGSLAGRRAGPAIWAQGWVPAAGGPAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINR 96
P S AG AG A+ VPA G +P+ + R+ HL E + + NR
Sbjct: 24 PASAAGAPAGQALPLM--VPAQRGASPEAASGGLPQARKRQRLTHLSPEEKALRRKLKNR 81
Query: 97 AYGKNSLSKNLIKML---SKAVDALKSDKK--VRTIIIRSEVPGIFCAGADLKERAKMSS 151
+ + + +M + VD + ++K + ++R + G+ +L++R M +
Sbjct: 82 VAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQELRQRLGMDA 141
>gi|118640873 X-box binding protein 1 isoform XBP1(S) [Homo sapiens]
Length = 376
Score = 31.2 bits (69), Expect = 1.4
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 37 PGSLAGRRAGPAIWAQGWVPAAGGPAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINR 96
P S AG AG A+ VPA G +P+ + R+ HL E + + NR
Sbjct: 24 PASAAGAPAGQALPLM--VPAQRGASPEAASGGLPQARKRQRLTHLSPEEKALRRKLKNR 81
Query: 97 AYGKNSLSKNLIKML---SKAVDALKSDKK--VRTIIIRSEVPGIFCAGADLKERAKMSS 151
+ + + +M + VD + ++K + ++R + G+ +L++R M +
Sbjct: 82 VAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQELRQRLGMDA 141
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,630,475
Number of Sequences: 37866
Number of extensions: 558585
Number of successful extensions: 1855
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1812
Number of HSP's gapped (non-prelim): 54
length of query: 339
length of database: 18,247,518
effective HSP length: 103
effective length of query: 236
effective length of database: 14,347,320
effective search space: 3385967520
effective search space used: 3385967520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.