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Search of human proteins with 44662819
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|44662819 ubiquitin-like 4B [Homo sapiens]
(174 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|44662819 ubiquitin-like 4B [Homo sapiens] 345 1e-95
gi|7657667 ubiquitin-like 4 [Homo sapiens] 126 1e-29
gi|208022622 ubiquitin and ribosomal protein S27a precursor [Hom... 50 8e-07
gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo ... 50 8e-07
gi|67191208 ubiquitin C [Homo sapiens] 49 2e-06
gi|11024714 ubiquitin B precursor [Homo sapiens] 49 3e-06
gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo s... 49 3e-06
gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo ... 49 3e-06
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 44 7e-05
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 44 7e-05
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 44 7e-05
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 44 7e-05
gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens] 43 2e-04
gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens] 43 2e-04
gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens] 43 2e-04
gi|5453760 neural precursor cell expressed, developmentally down... 42 3e-04
gi|221139761 zinc finger protein 853 [Homo sapiens] 41 6e-04
gi|58761508 midnolin [Homo sapiens] 41 6e-04
gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens] 40 0.001
gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens] 40 0.001
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens] 37 0.011
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 37 0.011
gi|4826774 ISG15 ubiquitin-like modifier [Homo sapiens] 36 0.015
gi|23312364 ubiquitin-like with PHD and ring finger domains 2 [H... 36 0.015
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 36 0.019
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 35 0.025
gi|41281753 NIMA-related kinase 11 isoform 2 [Homo sapiens] 35 0.043
gi|225637562 NIMA-related kinase 11 isoform 3 [Homo sapiens] 35 0.043
gi|225637560 NIMA-related kinase 11 isoform 1 [Homo sapiens] 35 0.043
gi|45430055 translokin [Homo sapiens] 34 0.056
>gi|44662819 ubiquitin-like 4B [Homo sapiens]
Length = 174
Score = 345 bits (885), Expect = 1e-95
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC
Sbjct: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
Query: 61 IGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEE 120
IGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEE
Sbjct: 61 IGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEE 120
Query: 121 RLQKISLEHLEQLAQYLLAEEPHVEPAGERELEAKARPQSSCDMEEKEEAAADQ 174
RLQKISLEHLEQLAQYLLAEEPHVEPAGERELEAKARPQSSCDMEEKEEAAADQ
Sbjct: 121 RLQKISLEHLEQLAQYLLAEEPHVEPAGERELEAKARPQSSCDMEEKEEAAADQ 174
>gi|7657667 ubiquitin-like 4 [Homo sapiens]
Length = 157
Score = 126 bits (316), Expect = 1e-29
Identities = 68/147 (46%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M LTVK L G+ CSL+V E V+TLK+LVS +L VP QQ LLF+G+ L D K LSDY
Sbjct: 1 MQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYS 60
Query: 61 IGPNASINVIMQPLEKMALKE------AHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLL 114
IGPN+ +N++++PLEK+ L+E A P Q +W + VLA+HF DA VL+ L
Sbjct: 61 IGPNSKLNLVVKPLEKVLLEEGEAQRLADSPPPQ-VWQLISKVLARHFSAADASRVLEQL 119
Query: 115 RQEHEERLQKISLEHLEQLAQYLLAEE 141
++++E L +++L+ +E+LA L E
Sbjct: 120 QRDYERSLSRLTLDDIERLASRFLHPE 146
>gi|208022622 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 50.4 bits (119), Expect = 8e-07
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEE 120
I ++++++++ L A K + T P + KH + AVL+ + +
Sbjct: 61 IQKESTLHLVLR-LRGGAKKRKKKSYTTPKKN-------KHKRKKVKLAVLKYYKVDENG 112
Query: 121 RLQKISLE 128
++ ++ E
Sbjct: 113 KISRLRRE 120
>gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 50.4 bits (119), Expect = 8e-07
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEE 120
I ++++++++ L A K + T P + KH + AVL+ + +
Sbjct: 61 IQKESTLHLVLR-LRGGAKKRKKKSYTTPKKN-------KHKRKKVKLAVLKYYKVDENG 112
Query: 121 RLQKISLE 128
++ ++ E
Sbjct: 113 KISRLRRE 120
>gi|67191208 ubiquitin C [Homo sapiens]
Length = 685
Score = 48.9 bits (115), Expect = 2e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 213 IQKESTLHLVLR 224
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 61 IQKESTLHLVLR 72
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 137 IQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 289 IQKESTLHLVLR 300
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 365 IQKESTLHLVLR 376
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 441 IQKESTLHLVLR 452
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 517 IQKESTLHLVLR 528
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 593 IQKESTLHLVLR 604
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 669 IQKESTLHLVLR 680
>gi|11024714 ubiquitin B precursor [Homo sapiens]
Length = 229
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 61 IQKESTLHLVLR 72
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 137 IQKESTLHLVLR 148
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 213 IQKESTLHLVLR 224
>gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 61 IQKESTLHLVLR 72
>gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IGPNASINVIMQ 72
I ++++++++
Sbjct: 61 IQKESTLHLVLR 72
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo
sapiens]
Length = 1126
Score = 43.9 bits (102), Expect = 7e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 5 VKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIG 62
VK L Q + V Q +V K ++ + +P E+Q L+++G++L+DDK L +Y +G
Sbjct: 21 VKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVG 78
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo
sapiens]
Length = 1126
Score = 43.9 bits (102), Expect = 7e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 5 VKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIG 62
VK L Q + V Q +V K ++ + +P E+Q L+++G++L+DDK L +Y +G
Sbjct: 21 VKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVG 78
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo
sapiens]
Length = 1126
Score = 43.9 bits (102), Expect = 7e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 5 VKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIG 62
VK L Q + V Q +V K ++ + +P E+Q L+++G++L+DDK L +Y +G
Sbjct: 21 VKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVG 78
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo
sapiens]
Length = 1132
Score = 43.9 bits (102), Expect = 7e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 5 VKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIG 62
VK L Q + V Q +V K ++ + +P E+Q L+++G++L+DDK L +Y +G
Sbjct: 21 VKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVG 78
>gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/68 (29%), Positives = 41/68 (60%)
Query: 5 VKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIGPN 64
VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSD I
Sbjct: 73 VKTLRGKTITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDCNIQKE 132
Query: 65 ASINVIMQ 72
+++++++
Sbjct: 133 PTLHLLLR 140
>gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/68 (29%), Positives = 41/68 (60%)
Query: 5 VKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIGPN 64
VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSD I
Sbjct: 73 VKTLRGKTITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDCNIQKE 132
Query: 65 ASINVIMQ 72
+++++++
Sbjct: 133 PTLHLLLR 140
>gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/68 (29%), Positives = 41/68 (60%)
Query: 5 VKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIGPN 64
VK L G+ +L+V +++ +K + + +P +QQ L+F G+ LED + LSD I
Sbjct: 73 VKTLRGKTITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDCNIQKE 132
Query: 65 ASINVIMQ 72
+++++++
Sbjct: 133 PTLHLLLR 140
>gi|5453760 neural precursor cell expressed, developmentally
down-regulated 8 [Homo sapiens]
Length = 81
Score = 42.0 bits (97), Expect = 3e-04
Identities = 18/71 (25%), Positives = 39/71 (54%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M + VK L G+ + + + V +K V + +P +QQ L++ G+ + D+K +DY
Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYK 60
Query: 61 IGPNASINVIM 71
I + +++++
Sbjct: 61 ILGGSVLHLVL 71
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 40.8 bits (94), Expect = 6e-04
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 38 EEQQHLLFRGQLLEDDKHLSDYCIGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLV 97
++QQ L + QLL+ + L + Q + + L++ Q Q Q L Q +
Sbjct: 205 QQQQEQLQQQQLLQQQEQLQQQQFQQQQE--QLQQQQQLLLLQQQGQLQQQLLQQQQAQL 262
Query: 98 LAKHFEPQDAKAVLQLLRQEHE----ERLQKISLEHLEQLAQYLLAEEPHVEPAGERELE 153
+ E Q A+ QLL Q+ E ++ Q++ + EQL Q L + P +EP E E+E
Sbjct: 263 QQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQL-QPPPLEPEEEEEVE 321
Query: 154 AKARPQSSCDMEEKEE 169
+ P +E E+
Sbjct: 322 LELMPVDLGSEQELEQ 337
Score = 26.9 bits (58), Expect = 8.9
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 72 QPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEERLQKISLEHLE 131
Q +++ + Q Q Q Q VL + + Q QLL+Q+ E+ Q+ L+ E
Sbjct: 162 QQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQE 221
Query: 132 QLAQYLLAEEPHVEPAGERELEAKARPQSSCDMEEKEEAAADQ 174
QL Q ++ ++ L + + Q + ++++A Q
Sbjct: 222 QLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQ 264
Score = 26.9 bits (58), Expect = 8.9
Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 18/131 (13%)
Query: 38 EEQQHLLFRGQLLEDDKHLSDYCIGPNASINVIMQPLEKMALKEAHQPQTQPLWHQ---- 93
E+QQ L + LL+ + L ++ Q E++ ++ P +P +
Sbjct: 268 EQQQAQLQQQLLLQQQEQLQQ-----QQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVEL 322
Query: 94 ------LGLVLAKHFEPQDAKAVLQLLRQEHEERLQKISLEHLEQLAQYLLAEEPHVEPA 147
LG + Q+ + +L RQ+ + +LQ E L+QL Q L ++ +E
Sbjct: 323 ELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLKLQEELQQLEQQLEQQQQQLE-- 380
Query: 148 GERELEAKARP 158
++E++ + P
Sbjct: 381 -QQEVQLELTP 390
>gi|58761508 midnolin [Homo sapiens]
Length = 468
Score = 40.8 bits (94), Expect = 6e-04
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M L + G R L V E+V L++ +S+RLKVP+E+ LL + L K L ++
Sbjct: 31 MSLAIHSTTGTRYDLAVPPDETVEGLRKRLSQRLKVPKERLALLHKDTRLSSGK-LQEFG 89
Query: 61 IGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEE 120
+G + + ++ +E + +A +P+ + L + + ++ L L + +
Sbjct: 90 VGDGSKLTLV-PTVEAGLMSQASRPEQSVMQALESLTETQVSDFLSGRSPLTLALRVGDH 148
Query: 121 RL--------QKISLEHLEQLAQYLLAEEPHVEPAGERELEAKARPQSS 161
+ Q L+H LA A +P+ + + RP SS
Sbjct: 149 MMFVQLQLAAQHAPLQHRHVLAAAAAAAAARGDPSIASPVSSPCRPVSS 197
>gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 39.7 bits (91), Expect = 0.001
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M L ++ L G L+VS E+V ++K + R +P +QHL++ LE+D L+DY
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 IGPNASINVIM 71
I ++ +++
Sbjct: 88 ISEGCTLKLVL 98
>gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 39.7 bits (91), Expect = 0.001
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60
M L ++ L G L+VS E+V ++K + R +P +QHL++ LE+D L+DY
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
Query: 61 IGPNASINVIM 71
I ++ +++
Sbjct: 88 ISEGCTLKLVL 98
>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
Length = 1044
Score = 36.6 bits (83), Expect = 0.011
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEE--QQHLLFRGQLLEDDKHLSD 58
M L + L QR +E+ L R + R+ + E Q+HL F QL+ED K LS+
Sbjct: 584 MLLLQRALAQQRDLTARRVKETEKALSRQLQRQREHYEATIQRHLAFIDQLIEDKKVLSE 643
Query: 59 YCIGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEH 118
C ++ ++ ++ + Q Q Q H+L + K KA + E
Sbjct: 644 KC----EAVVAELKQEDQRCTERVAQAQAQ---HELEIKKLKELMSATEKARREKWISEK 696
Query: 119 EERLQKISLEHLEQLAQYLLA 139
++++++++ LE Q L+A
Sbjct: 697 TKKIKEVTVRGLEPEIQKLIA 717
>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
Length = 1080
Score = 36.6 bits (83), Expect = 0.011
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 1 MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEE--QQHLLFRGQLLEDDKHLSD 58
M L + L QR +E+ L R + R+ + E Q+HL F QL+ED K LS+
Sbjct: 584 MLLLQRALAQQRDLTARRVKETEKALSRQLQRQREHYEATIQRHLAFIDQLIEDKKVLSE 643
Query: 59 YCIGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEH 118
C ++ ++ ++ + Q Q Q H+L + K KA + E
Sbjct: 644 KC----EAVVAELKQEDQRCTERVAQAQAQ---HELEIKKLKELMSATEKARREKWISEK 696
Query: 119 EERLQKISLEHLEQLAQYLLA 139
++++++++ LE Q L+A
Sbjct: 697 TKKIKEVTVRGLEPEIQKLIA 717
>gi|4826774 ISG15 ubiquitin-like modifier [Homo sapiens]
Length = 165
Score = 36.2 bits (82), Expect = 0.015
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 3 LTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFR--GQLLEDDKHLSDYC 60
LTVK+L G + +S SV+ LK +++++ V QQ L G L+D L+
Sbjct: 5 LTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQG 64
Query: 61 IGPNASINVIMQPLEK 76
+GP +++ +++ ++
Sbjct: 65 LGPGSTVLLVVDKCDE 80
Score = 28.9 bits (63), Expect = 2.3
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 10 GQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIGPNASI 67
G+ + +V ++VA LK+ VS V ++ L F G+ LED L +Y + P +++
Sbjct: 91 GRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTV 148
>gi|23312364 ubiquitin-like with PHD and ring finger domains 2
[Homo sapiens]
Length = 802
Score = 36.2 bits (82), Expect = 0.015
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 1 MFLTVKLLLGQR-CSLK-VSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSD 58
M++ V+ + G + C+++ VS + ++ L+ V V E Q L +RG+ LE+ L D
Sbjct: 1 MWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLENGYTLFD 60
Query: 59 YCIGPNASINVIMQP 73
Y +G N I ++++P
Sbjct: 61 YDVGLNDIIQLLVRP 75
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 35.8 bits (81), Expect = 0.019
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 111 LQLLRQEHEERLQKISL-EHLEQLAQYLLAEEPHVEPAGERELEA----------KARPQ 159
LQ L++E E +LQ++ L + ++ A+ LL EE + REL+ +AR
Sbjct: 350 LQQLQEEKERKLQELELLQEAQRQAERLLQEEEERRRSQHRELQQALEGQLREAEQARAS 409
Query: 160 SSCDMEEKEEAAADQ 174
+ME KEE AA Q
Sbjct: 410 MQAEMELKEEEAARQ 424
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 35.4 bits (80), Expect = 0.025
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 VSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIGPNASINVIMQPLEK 76
+ + SV K +SRR K ++Q L+F G++L+D L+ + I +++++++ +K
Sbjct: 28 ICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQK 87
Query: 77 M---ALKEAHQPQT 87
A A P T
Sbjct: 88 AQDPAAATASSPST 101
>gi|41281753 NIMA-related kinase 11 isoform 2 [Homo sapiens]
Length = 470
Score = 34.7 bits (78), Expect = 0.043
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 34 LKVP---EEQQHLLFR-GQLLEDDKHLSDYCIGPNASINVIMQP---LEKMALKEAHQPQ 86
LK+P E+ Q+L+ R ++ +DK+L C A I MQ L+ + Q
Sbjct: 282 LKIPYLDEQLQNLMCRYSEMTLEDKNLD--CQKEAAHIINAMQKRIHLQTLRALSEVQKM 339
Query: 87 TQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEERLQKISLEHLEQLAQYLLAEEPHVEP 146
T +L + A + + K +++ +E+ +R+Q++ + +QL+ +L E+ H++
Sbjct: 340 TPRERMRLRKLQAADEKARKLKKIVEEKYEENSKRMQELRSRNFQQLSVDVLHEKTHLKG 399
Query: 147 AGERELEAKARPQSSCDMEEKEE 169
E+E + + R SC ++++E
Sbjct: 400 MEEKEEQPEGR--LSCSPQDEDE 420
>gi|225637562 NIMA-related kinase 11 isoform 3 [Homo sapiens]
Length = 599
Score = 34.7 bits (78), Expect = 0.043
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 34 LKVP---EEQQHLLFR-GQLLEDDKHLSDYCIGPNASINVIMQP---LEKMALKEAHQPQ 86
LK+P E+ Q+L+ R ++ +DK+L C A I MQ L+ + Q
Sbjct: 282 LKIPYLDEQLQNLMCRYSEMTLEDKNLD--CQKEAAHIINAMQKRIHLQTLRALSEVQKM 339
Query: 87 TQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEERLQKISLEHLEQLAQYLLAEEPHVEP 146
T +L + A + + K +++ +E+ +R+Q++ + +QL+ +L E+ H++
Sbjct: 340 TPRERMRLRKLQAADEKARKLKKIVEEKYEENSKRMQELRSRNFQQLSVDVLHEKTHLKG 399
Query: 147 AGERELEAKARPQSSCDMEEKEE 169
E+E + + R SC ++++E
Sbjct: 400 MEEKEEQPEGR--LSCSPQDEDE 420
>gi|225637560 NIMA-related kinase 11 isoform 1 [Homo sapiens]
Length = 645
Score = 34.7 bits (78), Expect = 0.043
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 34 LKVP---EEQQHLLFR-GQLLEDDKHLSDYCIGPNASINVIMQP---LEKMALKEAHQPQ 86
LK+P E+ Q+L+ R ++ +DK+L C A I MQ L+ + Q
Sbjct: 282 LKIPYLDEQLQNLMCRYSEMTLEDKNLD--CQKEAAHIINAMQKRIHLQTLRALSEVQKM 339
Query: 87 TQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEERLQKISLEHLEQLAQYLLAEEPHVEP 146
T +L + A + + K +++ +E+ +R+Q++ + +QL+ +L E+ H++
Sbjct: 340 TPRERMRLRKLQAADEKARKLKKIVEEKYEENSKRMQELRSRNFQQLSVDVLHEKTHLKG 399
Query: 147 AGERELEAKARPQSSCDMEEKEE 169
E+E + + R SC ++++E
Sbjct: 400 MEEKEEQPEGR--LSCSPQDEDE 420
>gi|45430055 translokin [Homo sapiens]
Length = 500
Score = 34.3 bits (77), Expect = 0.056
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Query: 16 KVSGQESVATLKRLVSRRLKVPEEQ--QHLLFRGQLLEDDKHLSDYCIGPNASINVIMQP 73
++ +ESV TL R KV +EQ + + + + ++ L+ + N++ +
Sbjct: 87 RIQAEESVKTLSRETIEYKKVLDEQIQERENSKNEESKHNQELTSQLLAAENKCNLLEKQ 146
Query: 74 LEKMA--LKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEERLQKISLEHLE 131
LE M +K A +T L Q+ L + + ++ L+ L +E + +++ L
Sbjct: 147 LEYMRNMIKHAEMERTSVLEKQVSLERERQHDQTHVQSQLEKLDLLEQEYNKLTTMQALA 206
Query: 132 QLAQYLLAEEPHVEPAGERELEAKA 156
+ L + H E + ++AKA
Sbjct: 207 EKKMQELEAKLHEEEQERKRMQAKA 231
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,718,519
Number of Sequences: 37866
Number of extensions: 292516
Number of successful extensions: 1500
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 1373
Number of HSP's gapped (non-prelim): 190
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.