Search of human proteins with 42741652

Search of human proteins with 42741652

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42741652 RPA-binding trans-activator [Homo sapiens]
         (196 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42741652 RPA-binding trans-activator [Homo sapiens]                402   e-112
gi|15718684 RPA-binding trans-activator [Homo sapiens]                402   e-112
gi|153792060 SERTA domain containing 1 [Homo sapiens]                  72   3e-13
gi|154800457 centrosomal protein 68kDa [Homo sapiens]                  36   0.018
gi|157738677 basement membrane-induced gene isoform 3 [Homo sapi...    33   0.16 
gi|22027509 cell division cycle associated 4 [Homo sapiens]            33   0.16 
gi|22027511 cell division cycle associated 4 [Homo sapiens]            33   0.16 
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]             32   0.35 
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]             32   0.35 
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       32   0.35 
gi|18105018 acetylcholinesterase collagen-like tail subunit isof...    32   0.45 
gi|18105016 acetylcholinesterase collagen-like tail subunit isof...    32   0.45 
gi|193083163 roundabout, axon guidance receptor, homolog 2 isofo...    32   0.45 
gi|61888896 roundabout, axon guidance receptor, homolog 2 isofor...    32   0.45 
gi|7661926 SERTA domain containing 2 [Homo sapiens]                    32   0.45 
gi|239752748 PREDICTED: similar to forkhead box O6 [Homo sapiens]      31   0.59 
gi|239747320 PREDICTED: forkhead box protein O6 [Homo sapiens]         31   0.59 
gi|239741142 PREDICTED: forkhead box protein O6 [Homo sapiens]         31   0.59 
gi|12597625 activating transcription factor 5 [Homo sapiens]           31   0.59 
gi|89886470 hypothetical protein LOC84960 [Homo sapiens]               31   0.59 
gi|115298645 mitogen-activated protein kinase kinase kinase 14 [...    30   1.0  
gi|13128980 proline rich 14 [Homo sapiens]                             30   1.0  
gi|56549694 enabled homolog isoform a [Homo sapiens]                   30   1.3  
gi|39930375 enabled homolog isoform b [Homo sapiens]                   30   1.3  
gi|239757177 PREDICTED: hypothetical protein [Homo sapiens]            30   1.3  
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              30   1.3  
gi|148539835 dystroglycan 1 preproprotein [Homo sapiens]               30   1.7  
gi|45827729 scribble isoform b [Homo sapiens]                          30   1.7  
gi|45827731 scribble isoform a [Homo sapiens]                          30   1.7  
gi|7706687 Enah/Vasp-like [Homo sapiens]                               30   1.7  

>gi|42741652 RPA-binding trans-activator [Homo sapiens]
          Length = 196

 Score =  402 bits (1032), Expect = e-112
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MVGGLKRKHSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHN 60
           MVGGLKRKHSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHN
Sbjct: 1   MVGGLKRKHSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHN 60

Query: 61  TLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLG 120
           TLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLG
Sbjct: 61  TLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLG 120

Query: 121 LQNEVPPQPDPVFLEALSSRYLGDSGLDDFFLDIDTSAVEKEPARAPPEPPHNLFCAPGS 180
           LQNEVPPQPDPVFLEALSSRYLGDSGLDDFFLDIDTSAVEKEPARAPPEPPHNLFCAPGS
Sbjct: 121 LQNEVPPQPDPVFLEALSSRYLGDSGLDDFFLDIDTSAVEKEPARAPPEPPHNLFCAPGS 180

Query: 181 WEWNELDHIMEIILGS 196
           WEWNELDHIMEIILGS
Sbjct: 181 WEWNELDHIMEIILGS 196


>gi|15718684 RPA-binding trans-activator [Homo sapiens]
          Length = 196

 Score =  402 bits (1032), Expect = e-112
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MVGGLKRKHSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHN 60
           MVGGLKRKHSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHN
Sbjct: 1   MVGGLKRKHSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHN 60

Query: 61  TLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLG 120
           TLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLG
Sbjct: 61  TLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLG 120

Query: 121 LQNEVPPQPDPVFLEALSSRYLGDSGLDDFFLDIDTSAVEKEPARAPPEPPHNLFCAPGS 180
           LQNEVPPQPDPVFLEALSSRYLGDSGLDDFFLDIDTSAVEKEPARAPPEPPHNLFCAPGS
Sbjct: 121 LQNEVPPQPDPVFLEALSSRYLGDSGLDDFFLDIDTSAVEKEPARAPPEPPHNLFCAPGS 180

Query: 181 WEWNELDHIMEIILGS 196
           WEWNELDHIMEIILGS
Sbjct: 181 WEWNELDHIMEIILGS 196


>gi|153792060 SERTA domain containing 1 [Homo sapiens]
          Length = 236

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 42/228 (18%)

Query: 4   GLKRKHSDLEEEE----ERWEWSPAGLQSYQQA--------LLRISLDKVQRSLGPRAPS 51
           GLKRK  + EE+E    + W W   G  +  QA        L  +S+ K+  SL    P 
Sbjct: 5   GLKRKREEEEEKEPLAVDSW-WLDPGHTAVAQAPPAVASSSLFDLSVLKLHHSLQQSEPD 63

Query: 52  LRRHVLIHNTLQQLQAALRLAPAPALPPEPL----------FLGEEDFSLSATIGSILRE 101
           LR  VL+ NTL+++QA+  +APA ALPP P            L   D +LSA++ S+L +
Sbjct: 64  LRHLVLVVNTLRRIQAS--MAPAAALPPVPSPPAAPSVADNLLASSDAALSASMASLLED 121

Query: 102 LDTSMDGTEPPQNPVTPLGLQNE----VPPQPDPVFLEALSSRYLGDSGLDDFFLDIDTS 157
           L + ++G      P+   G          P    + L   ++  L D GL+  F DIDTS
Sbjct: 122 L-SHIEGLSQAPQPLADEGPPGRSIGGAAPSLGALDLLGPATGCLLDDGLEGLFEDIDTS 180

Query: 158 AVEKE---PARAPPEP-PHNLFCAPGSWE-----WNELDHIMEIILGS 196
             + E   PA    +P P +    PG  E       ELD++M++++G+
Sbjct: 181 MYDNELWAPASEGLKPGPED---GPGKEEAPELDEAELDYLMDVLVGT 225


>gi|154800457 centrosomal protein 68kDa [Homo sapiens]
          Length = 757

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 42/151 (27%), Positives = 54/151 (35%), Gaps = 28/151 (18%)

Query: 37  SLDKVQRSLGPRAPSLRRHVLIHNTLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIG 96
           SL KV  SL P  P            Q+  + + L P P   P+P+F G +   L     
Sbjct: 220 SLAKVSSSLEPVVP------------QEPSSVVGLGPRPQWSPQPVFSGGDASGLGRRRL 267

Query: 97  SILRE---------LDTSMDGTEPPQNPVTPLG--LQNEVPPQPDPVFLEALSSRYLGDS 145
           S   E         L  S D   P  NP       L    P +P P   + L SR   D 
Sbjct: 268 SFQAEYWACVLPDSLPPSPDRHSPLWNPNKEYEDLLDYTYPLRPGPQLPKHLDSRVPADP 327

Query: 146 GLDDFFLDIDTSAVE-----KEPARAPPEPP 171
            L D  +D+D+ +V      K P    P  P
Sbjct: 328 VLQDSGVDLDSFSVSPASTLKSPTNVSPNCP 358


>gi|157738677 basement membrane-induced gene isoform 3 [Homo
           sapiens]
          Length = 643

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 9/127 (7%)

Query: 9   HSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHNTLQQLQAA 68
           H  L ++   W W P    S  + LL++  D   + L    P+L  H LI     ++QA 
Sbjct: 158 HLPLSQKGPFWTWEP----SAPRTLLQVLQDPALKDLVLTCPTLPWHSLILRPQYEIQAI 213

Query: 69  LRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTS-MDGTEPPQNPVTPLGLQNEVPP 127
           + +       P  L +  ED + S+     ++ L  S +   E P     PL ++    P
Sbjct: 214 MHMRRTIVKIPSTLEVDVEDVTASSRHVHFIKPLLLSEVLAWEGP----FPLSMEILEVP 269

Query: 128 QPDPVFL 134
           +  P+FL
Sbjct: 270 EGRPIFL 276


>gi|22027509 cell division cycle associated 4 [Homo sapiens]
          Length = 241

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 4  GLKRKHSDLEEEEERWEWSPAGLQSY---QQALLRISLDKVQRSLGPRAPSLRRHVLIHN 60
          GLKRK    EE+ E        + SY   +Q+LL +SL K+Q       P+L R VLI N
Sbjct: 5  GLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSVLIAN 64

Query: 61 TLQQLQ 66
          T++Q+Q
Sbjct: 65 TVRQIQ 70


>gi|22027511 cell division cycle associated 4 [Homo sapiens]
          Length = 241

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 4  GLKRKHSDLEEEEERWEWSPAGLQSY---QQALLRISLDKVQRSLGPRAPSLRRHVLIHN 60
          GLKRK    EE+ E        + SY   +Q+LL +SL K+Q       P+L R VLI N
Sbjct: 5  GLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSVLIAN 64

Query: 61 TLQQLQ 66
          T++Q+Q
Sbjct: 65 TVRQIQ 70


>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
          Length = 1123

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 51  SLRRHVLIHNTLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTE 110
           SL +HVL+   L+Q +    L   P     PL  GE   +   T+G + R    S   + 
Sbjct: 444 SLLQHVLL---LEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSS 500

Query: 111 PPQNPVTPLGLQNEVPPQPDPVFLEALSSRYL 142
           P   P +P  LQ  V  Q    FLE    + L
Sbjct: 501 P--LPQSPQALQQLVMQQQHQQFLEKQKQQQL 530


>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
          Length = 1122

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 51  SLRRHVLIHNTLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTE 110
           SL +HVL+   L+Q +    L   P     PL  GE   +   T+G + R    S   + 
Sbjct: 443 SLLQHVLL---LEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSS 499

Query: 111 PPQNPVTPLGLQNEVPPQPDPVFLEALSSRYL 142
           P   P +P  LQ  V  Q    FLE    + L
Sbjct: 500 P--LPQSPQALQQLVMQQQHQQFLEKQKQQQL 529


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 16/106 (15%)

Query: 71  LAPAPALPPEPLFLGEEDFSLSAT-IGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQP 129
           LAP P +P +P+      +   A+ +G+        +   + PQ P+ PL    +VPPQ 
Sbjct: 744 LAPQPVVPLQPVPPHLPPYLAPASQVGA-----PAQLKPLQMPQAPLQPLA---QVPPQM 795

Query: 130 DPVFLEALSSRYLGDSGLDDFFLDIDTSAVEKEPARAPPEPPHNLF 175
            P+ +    +   G  GL     D+ T+ V       PP PP   F
Sbjct: 796 PPIPVVPPITPLAGIDGLPPALPDLPTATV-------PPVPPPQYF 834



 Score = 29.3 bits (64), Expect = 2.2
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 9/71 (12%)

Query: 59  HNTLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTP 118
           H+T+Q ++A     P PALPP+P    +       T+     +       T PPQ PV P
Sbjct: 929 HHTVQNMRAT---PPQPALPPQPTLPPQPVLPPQPTLPP---QPVLPPQPTRPPQ-PVLP 981

Query: 119 LGLQNEVPPQP 129
              Q  +PPQP
Sbjct: 982 --PQPMLPPQP 990


>gi|18105018 acetylcholinesterase collagen-like tail subunit isoform
           II [Homo sapiens]
          Length = 445

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 73  PAPALPPEPLFLGEEDFSLSATIGSILRELDTSMD-------GTEPPQNPVTPLGLQNEV 125
           P P L P P F G     LS  + +++ EL+TS         G+  P  P  P GL  + 
Sbjct: 47  PPPPLFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKT 106

Query: 126 PPQ 128
            P+
Sbjct: 107 GPK 109


>gi|18105016 acetylcholinesterase collagen-like tail subunit isoform
           I precursor [Homo sapiens]
          Length = 455

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 73  PAPALPPEPLFLGEEDFSLSATIGSILRELDTSMD-------GTEPPQNPVTPLGLQNEV 125
           P P L P P F G     LS  + +++ EL+TS         G+  P  P  P GL  + 
Sbjct: 57  PPPPLFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKT 116

Query: 126 PPQ 128
            P+
Sbjct: 117 GPK 119


>gi|193083163 roundabout, axon guidance receptor, homolog 2 isoform
            ROBO2a [Homo sapiens]
          Length = 1394

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 21/116 (18%)

Query: 66   QAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEV 125
            Q+   L P+P    +P+     D    A    I ++        +PPQ PV PLG     
Sbjct: 1164 QSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNNQPPQPPVPPLG----- 1218

Query: 126  PPQPDPVFLEALSSRYLGDSGLDDFFLDI-DTSAVEKEPARAPPEPPHNLFCAPGS 180
                           Y+  + + D   D+ D  A ++E A   P P   L   PGS
Sbjct: 1219 ---------------YVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGS 1259


>gi|61888896 roundabout, axon guidance receptor, homolog 2 isoform
            ROBO2b [Homo sapiens]
          Length = 1378

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 21/116 (18%)

Query: 66   QAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEV 125
            Q+   L P+P    +P+     D    A    I ++        +PPQ PV PLG     
Sbjct: 1148 QSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNNQPPQPPVPPLG----- 1202

Query: 126  PPQPDPVFLEALSSRYLGDSGLDDFFLDI-DTSAVEKEPARAPPEPPHNLFCAPGS 180
                           Y+  + + D   D+ D  A ++E A   P P   L   PGS
Sbjct: 1203 ---------------YVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGS 1243


>gi|7661926 SERTA domain containing 2 [Homo sapiens]
          Length = 314

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 41/163 (25%)

Query: 74  APALPPEPLFLGEEDFSLSATIGSILRELDTSMD------GTEPPQNPVTPLGLQNEVPP 127
           AP     P  L E+D S S+ +  I     TS         T+  +   +  G Q    P
Sbjct: 153 APTKLSPPALLPEKD-SFSSALDEIEELCPTSTSTEAATAATDSVKGTSSEAGTQKLDGP 211

Query: 128 QP----DPVFLEAL--------SSRYLGDSGLDDF-FLDIDTSAVEKEP--------ARA 166
           Q     D   +++L        S+ +L D  LDD  F DIDTS  + +P        ++ 
Sbjct: 212 QESRADDSKLMDSLPGNFEITTSTGFLTDLTLDDILFADIDTSMYDFDPCTSSSGTASKM 271

Query: 167 PPEPPHNLF-------------CAPGSWEWNELDHIMEIILGS 196
            P    +L                P   +  ELDHIME+++GS
Sbjct: 272 APVSADDLLKTLAPYSSQPVTPSQPFKMDLTELDHIMEVLVGS 314



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 4  GLKRKHSDLEEEEERWEWSPAGLQS------YQQALLRISLDKVQRSLGPRAPSLRRHVL 57
          G KRK  + E+  E    SP    S       +Q +  ISL K+        PSL++ VL
Sbjct: 5  GGKRKFDEHEDGLEGKIVSPCDGPSKVSYTLQRQTIFNISLMKLYNHRPLTEPSLQKTVL 64

Query: 58 IHNTLQQLQAALR 70
          I+N L+++Q  L+
Sbjct: 65 INNMLRRIQEELK 77


>gi|239752748 PREDICTED: similar to forkhead box O6 [Homo sapiens]
          Length = 562

 Score = 31.2 bits (69), Expect = 0.59
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)

Query: 79  PEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQPDPVFLEALS 138
           P+P   G+ED +L A +     +       T P   P  PLG   EV P       +A S
Sbjct: 207 PQPDLAGDEDGALGAGVAEGAEDCGPERRATAPAMAPAPPLGA--EVGP-----LRKAKS 259

Query: 139 SRYLGDSGLDDFFLDIDTSAVEKEP 163
           SR      L   + D+ T A+E  P
Sbjct: 260 SRRNAWGNLS--YADLITKAIESAP 282


>gi|239747320 PREDICTED: forkhead box protein O6 [Homo sapiens]
          Length = 589

 Score = 31.2 bits (69), Expect = 0.59
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)

Query: 79  PEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQPDPVFLEALS 138
           P+P   G+ED +L A +     +       T P   P  PLG   EV P       +A S
Sbjct: 30  PQPDLAGDEDGALGAGVAEGAEDCGPERRATAPAMAPAPPLGA--EVGP-----LRKAKS 82

Query: 139 SRYLGDSGLDDFFLDIDTSAVEKEP 163
           SR      L   + D+ T A+E  P
Sbjct: 83  SRRNAWGNLS--YADLITKAIESAP 105


>gi|239741142 PREDICTED: forkhead box protein O6 [Homo sapiens]
          Length = 492

 Score = 31.2 bits (69), Expect = 0.59
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%)

Query: 79  PEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQPDPVFLEALS 138
           P+P   G+ED +L A +     +       T P   P  PLG   EV P       +A S
Sbjct: 30  PQPDLAGDEDGALGAGVAEGAEDCGPERRATAPAMAPAPPLGA--EVGP-----LRKAKS 82

Query: 139 SRYLGDSGLDDFFLDIDTSAVEKEP 163
           SR      L   + D+ T A+E  P
Sbjct: 83  SRRNAWGNLS--YADLITKAIESAP 105


>gi|12597625 activating transcription factor 5 [Homo sapiens]
          Length = 282

 Score = 31.2 bits (69), Expect = 0.59
 Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 22/118 (18%)

Query: 72  APAPALPPEPLF--------LGEEDFSLSATIGSILRELD-TSMDGTEPPQNPVTPLGLQ 122
           APAP  P E L         +G E  +       +   +D T++   EPP  P T     
Sbjct: 33  APAPLAPYEVLGGALEGGLPVGGEPLAGDGFSDWMTERVDFTALLPLEPPLPPGT----- 87

Query: 123 NEVP-PQPDPVFLEALSSRYLGD-SGLDDFFLDIDTSAVEKEPARAPPEPPHNLFCAP 178
             +P P P P  LEA++S    +   ++DFFLD    A    P   PP PP  L  AP
Sbjct: 88  --LPQPSPTPPDLEAMASLLKKELEQMEDFFLD----APPLPPPSPPPLPPPPLPPAP 139


>gi|89886470 hypothetical protein LOC84960 [Homo sapiens]
          Length = 534

 Score = 31.2 bits (69), Expect = 0.59
 Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 4/62 (6%)

Query: 5   LKRKHSD-LEEEEERWEWSPAGLQSYQQALLRISL---DKVQRSLGPRAPSLRRHVLIHN 60
           +++K +D L+EEEER + + + +   Q+ LL I +   +   R +G   P+ +R V++ N
Sbjct: 374 VEKKMTDMLKEEEERLQLAHSNMTKGQELLLTIQMGIDNLYVRLMGITLPATQREVVLSN 433

Query: 61  TL 62
           TL
Sbjct: 434 TL 435


>gi|115298645 mitogen-activated protein kinase kinase kinase 14
           [Homo sapiens]
          Length = 947

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 50/192 (26%), Positives = 67/192 (34%), Gaps = 30/192 (15%)

Query: 2   VGGLKRKHSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHNT 61
           VGGLK   S    E +     P    +Y Q     +L    R L PRAP  R        
Sbjct: 658 VGGLK---SPWRGEYKEPRHPPPNQANYHQ-----TLHAQPRELSPRAPGPRPAEETTGR 709

Query: 62  LQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTP--- 118
             +LQ      P P  PPEP        +LS     +   L  S     P +NP +P   
Sbjct: 710 APKLQ-----PPLPPEPPEP--NKSPPLTLSKEESGMWEPLPLSSLEPAPARNPSSPERK 762

Query: 119 -LGLQNEVPPQPDPVFLEALSSRY--------LGDSGLDDFFLDIDTSAVEKEPARAPPE 169
               + E+      +FL +LS  +        L    +D   L  D+   EK P++A   
Sbjct: 763 ATVPEQELQQLEIELFLNSLSQPFSLEEQEQILSCLSIDSLSLSDDS---EKNPSKASQS 819

Query: 170 PPHNLFCAPGSW 181
               L     SW
Sbjct: 820 SRDTLSSGVHSW 831


>gi|13128980 proline rich 14 [Homo sapiens]
          Length = 585

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 42/169 (24%), Positives = 63/169 (37%), Gaps = 24/169 (14%)

Query: 22  SPAGLQSYQQALLRISLDKVQR-SLGPRAPSLRRHVLIHNTLQQLQAALRLAPAP----- 75
           +P+ L+   + +L + L+ V    + P  PS +  +  H++  Q     +   +P     
Sbjct: 40  APSPLEKASRRVLAVVLEDVMAVHMVPVVPSKQTSIPQHHSYHQDPVHRQPPASPPRQAG 99

Query: 76  ----ALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQPDP 131
               A PP+PL L  E  S      S LR    +  G E         G   +V   P P
Sbjct: 100 WSSQARPPDPLCLCREPLSRIHRTSSTLRRRSRTTPGPEE--------GPSQKVDRAPQP 151

Query: 132 ---VFLEALSSRYLGDSGLDDFFLDIDTSAVEKEP---ARAPPEPPHNL 174
              V LE ++S      G  D   +    A   EP    R P  PP +L
Sbjct: 152 TLVVMLEDIASPRPPAEGFIDETPNFIIPAQRAEPMRIVRQPTPPPGDL 200


>gi|56549694 enabled homolog isoform a [Homo sapiens]
          Length = 591

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 33/129 (25%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 6   KRKHSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHNTLQQ- 64
           + +   LE E+  WE       +   A +   L+ V        P L+       T  Q 
Sbjct: 245 RERQEQLEREQLEWERERRISSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQ 304

Query: 65  --LQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQ 122
             +   L   P P LPP P    +   +L    G         +  T PP  P  P  L 
Sbjct: 305 GIVLGPLAPPPPPPLPPGP---AQASVALPPPPGP---PPPPPLPSTGPPPPPPPP-PLP 357

Query: 123 NEVPPQPDP 131
           N+VPP P P
Sbjct: 358 NQVPPPPPP 366


>gi|39930375 enabled homolog isoform b [Homo sapiens]
          Length = 570

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 33/129 (25%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 6   KRKHSDLEEEEERWEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHVLIHNTLQQ- 64
           + +   LE E+  WE       +   A +   L+ V        P L+       T  Q 
Sbjct: 245 RERQEQLEREQLEWERERRISSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQ 304

Query: 65  --LQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQ 122
             +   L   P P LPP P    +   +L    G         +  T PP  P  P  L 
Sbjct: 305 GIVLGPLAPPPPPPLPPGP---AQASVALPPPPGP---PPPPPLPSTGPPPPPPPP-PLP 357

Query: 123 NEVPPQPDP 131
           N+VPP P P
Sbjct: 358 NQVPPPPPP 366


>gi|239757177 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 158

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 12/68 (17%)

Query: 47  PRAPS--LRRHV--LIHNTLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIGSILREL 102
           P AP   LR H   L     + L   LR AP  A+ P+PL  GE        IGS LRE 
Sbjct: 44  PGAPGSRLREHPGDLERGRCRGLSETLRGAPGLAVSPDPLTEGE--------IGSSLREG 95

Query: 103 DTSMDGTE 110
             ++DG E
Sbjct: 96  CRTLDGWE 103


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 40  KVQRSLGPRAPSLRRHVLI-----HNTLQQLQAALRLAPAPALPPEPLFLGEEDFSLSAT 94
           K Q+SL PR    ++  L+     H   Q  Q +    P P  PP+P+ LG      +  
Sbjct: 638 KYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPP 697

Query: 95  IGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQPDPVFLE 135
                + L     G  PP  P+        +PP  DP  L+
Sbjct: 698 PPP--KALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQ 736


>gi|148539835 dystroglycan 1 preproprotein [Homo sapiens]
          Length = 895

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 12/77 (15%)

Query: 106 MDGTEPPQNPVTPLGLQNEVPPQPDPVFLEALSSRYLGDSGLDDFFLDIDT----SAVEK 161
           +D ++PP +   PL LQ E  P P P         Y   S  +   L+ DT    + +  
Sbjct: 804 LDDSKPPPSSSMPLILQEEKAPLPPP--------EYPNQSVPETTPLNQDTMGEYTPLRD 855

Query: 162 EPARAPPEPPHNLFCAP 178
           E   APP  P   F AP
Sbjct: 856 EDPNAPPYQPPPPFTAP 872


>gi|45827729 scribble isoform b [Homo sapiens]
          Length = 1630

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 37   SLDKVQRSLGPRAPSLRRHVLIHNTLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIG 96
            S+  + R L P  P   + +      Q L        A     +PL L     +   + G
Sbjct: 1223 SISSIDRELSPEGPGKEKEL----PGQTLHWGPEATEAAGRGLQPLKLDYRALAAVPSAG 1278

Query: 97   SILRELDTSMDGTEPPQNPVTPLGLQNEVPPQPD 130
            S+ R + +   G +  ++P +P G Q   PP PD
Sbjct: 1279 SVQR-VPSGAAGGKMAESPCSPSGQQPPSPPSPD 1311


>gi|45827731 scribble isoform a [Homo sapiens]
          Length = 1655

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 37   SLDKVQRSLGPRAPSLRRHVLIHNTLQQLQAALRLAPAPALPPEPLFLGEEDFSLSATIG 96
            S+  + R L P  P   + +      Q L        A     +PL L     +   + G
Sbjct: 1223 SISSIDRELSPEGPGKEKEL----PGQTLHWGPEATEAAGRGLQPLKLDYRALAAVPSAG 1278

Query: 97   SILRELDTSMDGTEPPQNPVTPLGLQNEVPPQPD 130
            S+ R + +   G +  ++P +P G Q   PP PD
Sbjct: 1279 SVQR-VPSGAAGGKMAESPCSPSGQQPPSPPSPD 1311


>gi|7706687 Enah/Vasp-like [Homo sapiens]
          Length = 418

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 17/96 (17%)

Query: 40  KVQRSLGPRAPSLRRHVLIHNTLQQLQAALRL---APAPALPPEPLFLGEEDFSLSATIG 96
           +VQ    P    ++R  ++    QQ Q +L     A  P LPP     G    + SA + 
Sbjct: 126 QVQNGPSPDEMDIQRRQVMEQHQQQRQESLERRTSATGPILPP-----GHPSSAASAPV- 179

Query: 97  SILRELDTSMDGTEPPQNPVTPLGLQNEVPPQPDPV 132
                   S  G  PP  P  P       PP P P+
Sbjct: 180 --------SCSGPPPPPPPPVPPPPTGATPPPPPPL 207


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,983,359
Number of Sequences: 37866
Number of extensions: 531709
Number of successful extensions: 1892
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 1843
Number of HSP's gapped (non-prelim): 117
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.