Guide to the Human Genome
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Name: ZNF493 Sequence: fasta or formatted (646aa) NCBI GI: 115511042
Description:

zinc finger protein 493 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [774aa] zinc finger protein 493 isoform 3
alt prot [103aa] zinc finger protein 493 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5         16           1
 C cysteine            7.0         45           1
 D aspartate           0.6          4           1
 E glutamate           9.6         62           2
 F phenylalanine       4.6         30           1
 G glycine             5.6         36           1
 H histidine           8.8         57           1
 I isoleucine          6.8         44           2
 K lysine             15.9        103           2
 L leucine             4.3         28           2
 M methionine          0.5          3           1
 N asparagine          2.9         19           1
 P proline             2.8         18           1
 Q glutamine           2.0         13           1
 R arginine            3.9         25           2
 S serine              7.7         50           2
 T threonine           8.7         56           3
 V valine              1.2          8           1
 W tryptophan          0.2          1           1
 Y tyrosine            4.3         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 493 isoform 1 
ZNF493                1.000   zinc finger protein 493 isoform 3 
ZNF208                0.658   zinc finger protein 208 
ZNF91                 0.656   zinc finger protein 91 
ZNF99                 0.649   zinc finger protein 99 
ZNF43                 0.648   zinc finger protein 43 
LOC100292052          0.648   PREDICTED: similar to hCG1773661 
LOC100287226          0.648   PREDICTED: similar to hCG1773661 
LOC100287226          0.648   PREDICTED: hypothetical protein XP_002343677 
ZNF107                0.630   zinc finger protein 107 
ZNF107                0.630   zinc finger protein 107 
ZNF726                0.623   PREDICTED: zinc finger protein 726 
ZNF726                0.623   PREDICTED: zinc finger protein 726 
ZNF726                0.623   PREDICTED: zinc finger protein 726 
ZNF721                0.558   zinc finger protein 721 
ZNF728                0.541   PREDICTED: zinc finger protein 728 
ZNF728                0.541   PREDICTED: zinc finger protein 728 
ZNF728                0.541   PREDICTED: zinc finger protein 728 
ZNF429                0.541   zinc finger protein 429 
ZNF845                0.537   zinc finger protein 845 
ZNF254                0.530   zinc finger protein 254 
ZNF160                0.528   zinc finger protein 160 
ZNF160                0.528   zinc finger protein 160 
ZNF160                0.528   zinc finger protein 160 
ZNF836                0.515   zinc finger protein 836 
ZNF85                 0.509   zinc finger protein 85 
ZNF347                0.509   zinc finger protein 347 
ZFP62                 0.507   zinc finger protein 62 homolog 
ZNF676                0.504   zinc finger protein 676 
ZNF681                0.504   zinc finger protein 681 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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