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Search of human proteins with 42490753
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|42490753 TEA domain family member 3 [Homo sapiens]
(435 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42490753 TEA domain family member 3 [Homo sapiens] 872 0.0
gi|11386151 TEA domain family member 1 [Homo sapiens] 600 e-172
gi|46411152 TEA domain family member 4 isoform 1 [Homo sapiens] 599 e-171
gi|46411156 TEA domain family member 4 isoform 2 [Homo sapiens] 553 e-157
gi|20070103 TEA domain family member 2 [Homo sapiens] 530 e-150
gi|46411159 TEA domain family member 4 isoform 3 [Homo sapiens] 416 e-116
gi|153792074 proline rich 12 [Homo sapiens] 42 0.001
gi|157168329 formin 1 [Homo sapiens] 40 0.004
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 39 0.007
gi|47132519 Ras association and pleckstrin homology domains 1 is... 39 0.009
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 37 0.027
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 37 0.027
gi|119120861 formin-like 3 isoform 2 [Homo sapiens] 37 0.035
gi|119120874 formin-like 3 isoform 1 [Homo sapiens] 37 0.035
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 37 0.035
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 37 0.035
gi|223555921 hepatocellular carcinoma related protein 1 isoform ... 37 0.046
gi|223555919 hepatocellular carcinoma related protein 1 isoform ... 37 0.046
gi|24497513 homeobox A3 isoform a [Homo sapiens] 37 0.046
gi|13562112 homeobox A3 isoform a [Homo sapiens] 37 0.046
gi|210032580 SET domain containing 1B [Homo sapiens] 37 0.046
gi|222446620 hypothetical protein LOC342346 [Homo sapiens] 36 0.060
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.060
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.060
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 36 0.060
gi|145977194 hypothetical protein LOC400793 isoform 2 [Homo sapi... 36 0.078
gi|207028635 hypothetical protein LOC400793 isoform 1 [Homo sapi... 36 0.078
gi|146134388 YLP motif containing 1 [Homo sapiens] 36 0.078
gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2) int... 35 0.10
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 35 0.10
>gi|42490753 TEA domain family member 3 [Homo sapiens]
Length = 435
Score = 872 bits (2253), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MASNSWNASSSPGEAREDGPEGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIIL 60
MASNSWNASSSPGEAREDGPEGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIIL
Sbjct: 1 MASNSWNASSSPGEAREDGPEGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIIL 60
Query: 61 SDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLDQVSKD 120
SDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLDQVSKD
Sbjct: 61 SDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLDQVSKD 120
Query: 121 KALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKP 180
KALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKP
Sbjct: 121 KALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKP 180
Query: 181 FAQPAYPIQPPLPPTLSSYEPLAPLPSAAASVPVWQDRTIASSRLRLLEYSAFMEVQRDP 240
FAQPAYPIQPPLPPTLSSYEPLAPLPSAAASVPVWQDRTIASSRLRLLEYSAFMEVQRDP
Sbjct: 181 FAQPAYPIQPPLPPTLSSYEPLAPLPSAAASVPVWQDRTIASSRLRLLEYSAFMEVQRDP 240
Query: 241 DTYSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFW 300
DTYSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFW
Sbjct: 241 DTYSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFW 300
Query: 301 ADLNSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVY 360
ADLNSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVY
Sbjct: 301 ADLNSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVY 360
Query: 361 RIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVST 420
RIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVST
Sbjct: 361 RIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVST 420
Query: 421 SEHGAQHHVYKLVKD 435
SEHGAQHHVYKLVKD
Sbjct: 421 SEHGAQHHVYKLVKD 435
>gi|11386151 TEA domain family member 1 [Homo sapiens]
Length = 411
Score = 600 bits (1547), Expect = e-172
Identities = 300/415 (72%), Positives = 346/415 (83%), Gaps = 9/415 (2%)
Query: 21 EGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLR 80
+ DK +DNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLR
Sbjct: 6 DSADKPIDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLR 65
Query: 81 TGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLDQVSKDKALQSMASMSSAQIVSASVL 140
TGKTRTRKQVSSHIQVLAR+K R++ +K DQ +KDKALQ MA+MSSAQIVSA+ +
Sbjct: 66 TGKTRTRKQVSSHIQVLARRKSRDFHSKLK----DQTAKDKALQHMAAMSSAQIVSATAI 121
Query: 141 QNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYE 200
NK P +P+ F + FW GQ PG SQD+KPF Q AYPIQP + + +E
Sbjct: 122 HNKLGLPG-IPRPTFPGAPGFWPGMIQTGQ-PGSSQDVKPFVQQAYPIQPAVTAPIPGFE 179
Query: 201 PLAPLPSAAASVPVWQDRTIASSRLRLLEYSAFMEVQRDPDTYSKHLFVHIGQTNPAFSD 260
P + + A SVP WQ R+I +++LRL+E+SAF+E QRDPD+Y+KHLFVHIG N ++SD
Sbjct: 180 PAS---APAPSVPAWQGRSIGTTKLRLVEFSAFLEQQRDPDSYNKHLFVHIGHANHSYSD 236
Query: 261 PPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADLNSTIQEGPGAFYGVSSQ 320
P LE+VD+RQIYDKFPEKKGGLKEL+ KGP NAFFLVKFWADLN IQ+ GAFYGV+SQ
Sbjct: 237 PLLESVDIRQIYDKFPEKKGGLKELFGKGPQNAFFLVKFWADLNCNIQDDAGAFYGVTSQ 296
Query: 321 YSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVYRIHRSPMCEYMINFIHKLKH 380
Y S+++MT++ STKVCSFGKQVVEKVETEYAR ENGRFVYRI+RSPMCEYMINFIHKLKH
Sbjct: 297 YESSENMTVTCSTKVCSFGKQVVEKVETEYARFENGRFVYRINRSPMCEYMINFIHKLKH 356
Query: 381 LPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVSTSEHGAQHHVYKLVKD 435
LPEKYMMNSVLENFTIL VVT+RD+QETLL +A VFEVS SEHGAQHH+Y+LVKD
Sbjct: 357 LPEKYMMNSVLENFTILLVVTNRDTQETLLCMACVFEVSNSEHGAQHHIYRLVKD 411
>gi|46411152 TEA domain family member 4 isoform 1 [Homo sapiens]
Length = 434
Score = 599 bits (1545), Expect = e-171
Identities = 307/439 (69%), Positives = 357/439 (81%), Gaps = 16/439 (3%)
Query: 1 MASNSWNASSSP-GEAREDGPEGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKII 59
+ SN W++ +SP G G + LDK +DNDAEGVWSPDIEQSFQEALAIYPPCGRRKII
Sbjct: 8 ITSNEWSSPTSPEGSTASGGSQALDKPIDNDAEGVWSPDIEQSFQEALAIYPPCGRRKII 67
Query: 60 LSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLDQVSK 119
LSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLAR+K RE Q +K DQ +K
Sbjct: 68 LSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKAREIQAKLK----DQAAK 123
Query: 120 DKALQSMASMSSAQIVSASVLQNKFS-PPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDI 178
DKALQSMA+MSSAQI+SA+ + + P AV S FW L Q G S D+
Sbjct: 124 DKALQSMAAMSSAQIISATAFHSSMALARGPGRPAV----SGFWQGA--LPGQAGTSHDV 177
Query: 179 KPFAQPAYPIQPPLPPTLSSYE-PLAPLPSAAAS-VPVWQDRTIASSRLRLLEYSAFMEV 236
KPF+Q Y +QPPLP L +E P P PS +A P WQ R++ASS+L +LE+SAF+E
Sbjct: 178 KPFSQQTYAVQPPLP--LPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQ 235
Query: 237 QRDPDTYSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFL 296
Q+DPDTY+KHLFVHIGQ++P++SDP LEAVD+RQIYDKFPEKKGGLK+L+E+GP NAFFL
Sbjct: 236 QQDPDTYNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFL 295
Query: 297 VKFWADLNSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENG 356
VKFWADLN+ I++ +FYGVSSQY S ++M I+ STKVCSFGKQVVEKVETEYAR ENG
Sbjct: 296 VKFWADLNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENG 355
Query: 357 RFVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVF 416
+ YRIHRSP+CEYMINFIHKLKHLPEKYMMNSVLENFTILQVVT+RD+QETLL IA+VF
Sbjct: 356 HYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVF 415
Query: 417 EVSTSEHGAQHHVYKLVKD 435
EVS SEHGAQHH+Y+LVK+
Sbjct: 416 EVSASEHGAQHHIYRLVKE 434
>gi|46411156 TEA domain family member 4 isoform 2 [Homo sapiens]
Length = 391
Score = 553 bits (1424), Expect = e-157
Identities = 284/438 (64%), Positives = 328/438 (74%), Gaps = 57/438 (13%)
Query: 1 MASNSWNASSSP-GEAREDGPEGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKII 59
+ SN W++ +SP G G + LDK +DNDAEGVWSPDIEQSFQEALAIYPPCGRRKII
Sbjct: 8 ITSNEWSSPTSPEGSTASGGSQALDKPIDNDAEGVWSPDIEQSFQEALAIYPPCGRRKII 67
Query: 60 LSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLDQVSK 119
LSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLAR+K RE Q +K
Sbjct: 68 LSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKAREIQAKLK--------- 118
Query: 120 DKALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIK 179
FW L Q G S D+K
Sbjct: 119 -----------------------------------------FWQG--ALPGQAGTSHDVK 135
Query: 180 PFAQPAYPIQPPLPPTLSSYE-PLAPLPS-AAASVPVWQDRTIASSRLRLLEYSAFMEVQ 237
PF+Q Y +QPPLP L +E P P PS +A P WQ R++ASS+L +LE+SAF+E Q
Sbjct: 136 PFSQQTYAVQPPLP--LPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQ 193
Query: 238 RDPDTYSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLV 297
+DPDTY+KHLFVHIGQ++P++SDP LEAVD+RQIYDKFPEKKGGLK+L+E+GP NAFFLV
Sbjct: 194 QDPDTYNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLV 253
Query: 298 KFWADLNSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGR 357
KFWADLN+ I++ +FYGVSSQY S ++M I+ STKVCSFGKQVVEKVETEYAR ENG
Sbjct: 254 KFWADLNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGH 313
Query: 358 FVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFE 417
+ YRIHRSP+CEYMINFIHKLKHLPEKYMMNSVLENFTILQVVT+RD+QETLL IA+VFE
Sbjct: 314 YSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFE 373
Query: 418 VSTSEHGAQHHVYKLVKD 435
VS SEHGAQHH+Y+LVK+
Sbjct: 374 VSASEHGAQHHIYRLVKE 391
>gi|20070103 TEA domain family member 2 [Homo sapiens]
Length = 447
Score = 530 bits (1364), Expect = e-150
Identities = 282/445 (63%), Positives = 330/445 (74%), Gaps = 24/445 (5%)
Query: 4 NSWNASSSPGEAREDGPEGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDE 63
+ W S E G EG DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDE
Sbjct: 14 SGWTGSEEGSEEGTGGSEGAGGDGGPDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDE 73
Query: 64 GKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLDQVSKDKAL 123
GKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLAR+K RE Q +K DQVSKDKA
Sbjct: 74 GKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSREIQSKLK----DQVSKDKAF 129
Query: 124 QSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQ 183
Q+MA+MSSAQ++SA LQ K P P +F +FWS P D+KPF+Q
Sbjct: 130 QTMATMSSAQLISAPSLQAKLGPTGPQASELF----QFWSGG---SGPPWNVPDVKPFSQ 182
Query: 184 PAYPIQPPLPPT-LSSYEP---LAPLPSAAASVPVWQDRTIASSRLRLLEYSAFMEVQRD 239
+ + P T L YEP L+PLP S P WQ R + ++RL+L+E+SAF+E
Sbjct: 183 TPFTLSLTPPSTDLPGYEPPQALSPLPPPTPSPPAWQARGLGTARLQLVEFSAFVEPPDA 242
Query: 240 PDTYSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKF 299
D+Y +HLFVHI Q P+ PPLE+VDVRQIYDKFPEKKGGL+ELY++GPP+AFFLVKF
Sbjct: 243 VDSYQRHLFVHISQHCPSPGAPPLESVDVRQIYDKFPEKKGGLRELYDRGPPHAFFLVKF 302
Query: 300 WADLN---STIQEGPGA------FYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEY 350
WADLN S + G G FYGVSSQY S + MT++ S+KVCSFGKQVVEKVETE
Sbjct: 303 WADLNWGPSGEEAGAGGSISSGGFYGVSSQYESLEHMTLTCSSKVCSFGKQVVEKVETER 362
Query: 351 ARLENGRFVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLL 410
A+LE+GRFVYR+ RSPMCEY++NF+HKL+ LPE+YMMNSVLENFTILQVVT+RD+QE LL
Sbjct: 363 AQLEDGRFVYRLLRSPMCEYLVNFLHKLRQLPERYMMNSVLENFTILQVVTNRDTQELLL 422
Query: 411 VIAFVFEVSTSEHGAQHHVYKLVKD 435
A+VFEVSTSE GAQHH+Y+LV+D
Sbjct: 423 CTAYVFEVSTSERGAQHHIYRLVRD 447
>gi|46411159 TEA domain family member 4 isoform 3 [Homo sapiens]
Length = 305
Score = 416 bits (1068), Expect = e-116
Identities = 211/313 (67%), Positives = 252/313 (80%), Gaps = 11/313 (3%)
Query: 126 MASMSSAQIVSASVLQNKFS-PPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQP 184
MA+MSSAQI+SA+ + + P AV S FW L Q G S D+KPF+Q
Sbjct: 1 MAAMSSAQIISATAFHSSMALARGPGRPAV----SGFWQGA--LPGQAGTSHDVKPFSQQ 54
Query: 185 AYPIQPPLPPTLSSYE-PLAPLPSAAAS-VPVWQDRTIASSRLRLLEYSAFMEVQRDPDT 242
Y +QPPLP L +E P P PS +A P WQ R++ASS+L +LE+SAF+E Q+DPDT
Sbjct: 55 TYAVQPPLP--LPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQQDPDT 112
Query: 243 YSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFWAD 302
Y+KHLFVHIGQ++P++SDP LEAVD+RQIYDKFPEKKGGLK+L+E+GP NAFFLVKFWAD
Sbjct: 113 YNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWAD 172
Query: 303 LNSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVYRI 362
LN+ I++ +FYGVSSQY S ++M I+ STKVCSFGKQVVEKVETEYAR ENG + YRI
Sbjct: 173 LNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGHYSYRI 232
Query: 363 HRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVSTSE 422
HRSP+CEYMINFIHKLKHLPEKYMMNSVLENFTILQVVT+RD+QETLL IA+VFEVS SE
Sbjct: 233 HRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASE 292
Query: 423 HGAQHHVYKLVKD 435
HGAQHH+Y+LVK+
Sbjct: 293 HGAQHHIYRLVKE 305
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 42.0 bits (97), Expect = 0.001
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 147 PSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLP-PTLSSYEPL-AP 204
P PLP + S +S PPLL ++P P+ P QP P PP P P L S PL AP
Sbjct: 1433 PPPLP-GLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAP 1491
Query: 205 LPSAAASVPV 214
PS+ P+
Sbjct: 1492 TPSSPPPPPL 1501
Score = 32.3 bits (72), Expect = 0.86
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
Query: 146 PPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPL 205
PP P PQ S PPL+ P + P P+ PP PP + S P P
Sbjct: 1473 PPPPPPQPALP------SPPPLVAPTPS--------SPPPPPLPPPPPPAMPSPPP--PP 1516
Query: 206 PSAAASVPVWQDRTIASS 223
P AAA + + A S
Sbjct: 1517 PPAAAPLAAPPEEPAAPS 1534
Score = 31.6 bits (70), Expect = 1.5
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 18/96 (18%)
Query: 136 SASVLQNKFSPPS-------PLPQAVFST-----SSRFWSSPPLLGQQPGPSQDIKPFAQ 183
SAS L ++F PS P P +F + SS F SS L Q S +PF
Sbjct: 105 SASSLLSQFRSPSWQTAMHTPGPTELFISGALPGSSTFPSSSALSAYQHPASFGSRPFPV 164
Query: 184 PAY------PIQPPLPPTLSSYEPLAPLPSAAASVP 213
P+ P PP LS ++ L PS A +VP
Sbjct: 165 PSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVP 200
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 40.0 bits (92), Expect = 0.004
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 20/124 (16%)
Query: 100 KKVREYQVGIKAMNLDQVSK----------DKALQSMASMSSAQIVSASVLQNKFSPPSP 149
K R Q+ K +N+ +S+ ALQ M M+S Q + PP P
Sbjct: 598 KTTRSNQLVPKKLNISSLSQLSPPNDHKDIHAALQPMEGMASNQQKALPPPPASIPPPPP 657
Query: 150 LPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPLPSAA 209
LP + S S +PP+ P P P P PPLPP S+ P P P
Sbjct: 658 LPSGLGSLS----PAPPM------PPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPL 707
Query: 210 ASVP 213
+ P
Sbjct: 708 PNSP 711
Score = 29.3 bits (64), Expect = 7.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 176 QDIKPFAQPAYPIQPPLPPTLSSYEPLAPLPSAAASVPV 214
Q P + P PPLP L S P P+P +A P+
Sbjct: 642 QKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPL 680
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 39.3 bits (90), Expect = 0.007
Identities = 53/169 (31%), Positives = 67/169 (39%), Gaps = 33/169 (19%)
Query: 113 NLDQVSKDKALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQP 172
+L Q S+D L +SS Q A++ + PP L V S P
Sbjct: 1479 HLPQDSQDLVLGGDVPISSIQ---ATIAKLSIRPPGGLESPVASL--------------P 1521
Query: 173 GPSQD--IKPFAQP-AYPIQPPLPPTLSSYEPLAPLPSAAASVPVWQDRTIASSRLRLL- 228
GP++ + P + P + PI PP LSS P AP P VP SS L LL
Sbjct: 1522 GPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLELLA 1581
Query: 229 ----EYSAFMEVQRDPDTYSKHLFV--HIGQ----TNPAFSDPPLEAVD 267
E + R SKH F+ H GQ T P SD PL +D
Sbjct: 1582 SLTPEAFSLDSSLRGKQRMSKHNFLQAHNGQGLRATRP--SDDPLSLLD 1628
Score = 30.4 bits (67), Expect = 3.3
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 146 PPSPLPQAVFSTSSRFWSSPPLLGQQ--PGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLA 203
P SP P A PP L Q PGP+QD P A P P PP + PLA
Sbjct: 994 PQSPYPYA--PQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQ-PPHPPLA 1050
Query: 204 --PLPSAAASVP 213
P PS P
Sbjct: 1051 YGPAPSTRPMGP 1062
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 38.9 bits (89), Expect = 0.009
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 145 SPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAP 204
+PP P+P F + PP P PS +K A P PP PP + S +PL P
Sbjct: 830 TPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSV-VKQIASQFPP--PPTPPAMES-QPLKP 885
Query: 205 LPS--------AAASVPVWQDRTI 220
+P+ A + P WQ +I
Sbjct: 886 VPANVAPQSPPAVKAKPKWQPSSI 909
Score = 28.9 bits (63), Expect = 9.6
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Query: 146 PPSPLPQAVFSTSSRFWSSP--PLLGQQPGPSQDIK-----PFAQPAYPIQPPLPPTLSS 198
PP P P S ++ +P P L Q P +K Q A P PP PP +
Sbjct: 713 PPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAP 772
Query: 199 YEPLAPLPSAAASVP 213
P AP P ++P
Sbjct: 773 LPPQAP-PKPLVTIP 786
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 37.4 bits (85), Expect = 0.027
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 20/164 (12%)
Query: 56 RKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLD 115
R ++L+ + + E++ R + ++ G+ R V +H V A + + Q G N
Sbjct: 321 RAVLLASDAQECTLEEVVERLLSVK-GRPRPSPLVKAHKSVQAN--LDQSQRGSSPQNTT 377
Query: 116 QVSKDKALQSMASMSSAQIV----SASVL---------QNKFSPPSPLPQAVFSTSSRFW 162
Q A+ ++ + V S S+L Q +PP P P + SS
Sbjct: 378 TPKPSVEGQQPAAAAACEPVDHAQSESILKVSQPRALEQQASTPPPPPPPPLLPGSSAEP 437
Query: 163 SSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPLP 206
PP P P + A P P PPLP + P PLP
Sbjct: 438 PPPP----PPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLP 477
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 37.4 bits (85), Expect = 0.027
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 20/164 (12%)
Query: 56 RKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLD 115
R ++L+ + + E++ R + ++ G+ R V +H V A + + Q G N
Sbjct: 321 RAVLLASDAQECTLEEVVERLLSVK-GRPRPSPLVKAHKSVQAN--LDQSQRGSSPQNTT 377
Query: 116 QVSKDKALQSMASMSSAQIV----SASVL---------QNKFSPPSPLPQAVFSTSSRFW 162
Q A+ ++ + V S S+L Q +PP P P + SS
Sbjct: 378 TPKPSVEGQQPAAAAACEPVDHAQSESILKVSQPRALEQQASTPPPPPPPPLLPGSSAEP 437
Query: 163 SSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPLP 206
PP P P + A P P PPLP + P PLP
Sbjct: 438 PPPP----PPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLP 477
>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
Length = 976
Score = 37.0 bits (84), Expect = 0.035
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 121 KALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKP 180
+ L+S+ S + A++ A + + PPS L LL P P + +
Sbjct: 425 RGLESVDSEALARVGPAELSEGM--PPSDLD---------------LLAPAPPPEEVLPL 467
Query: 181 FAQPAYPIQPPLPPTLSSYEPLAPLPSAAASVPVWQDRTIASSRLRL 227
PA P+ PP PP P PLP AA SV + T+ S +R+
Sbjct: 468 PPPPAPPLPPPPPPLPDKCPPAPPLPGAAPSVVL----TVGLSAIRI 510
>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
Length = 1027
Score = 37.0 bits (84), Expect = 0.035
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 121 KALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKP 180
+ L+S+ S + A++ A + + PPS L LL P P + +
Sbjct: 476 RGLESVDSEALARVGPAELSEGM--PPSDLD---------------LLAPAPPPEEVLPL 518
Query: 181 FAQPAYPIQPPLPPTLSSYEPLAPLPSAAASVPVWQDRTIASSRLRL 227
PA P+ PP PP P PLP AA SV + T+ S +R+
Sbjct: 519 PPPPAPPLPPPPPPLPDKCPPAPPLPGAAPSVVL----TVGLSAIRI 561
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 37.0 bits (84), Expect = 0.035
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 143 KFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIK-PFAQPAY-PIQPPLPPTLSSYE 200
+F P+P P AV PP G GP + PF +P + P PP+PP
Sbjct: 28 RFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPP 87
Query: 201 PLAP 204
P+ P
Sbjct: 88 PMGP 91
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 37.0 bits (84), Expect = 0.035
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 143 KFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIK-PFAQPAY-PIQPPLPPTLSSYE 200
+F P+P P AV PP G GP + PF +P + P PP+PP
Sbjct: 28 RFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPP 87
Query: 201 PLAP 204
P+ P
Sbjct: 88 PMGP 91
>gi|223555921 hepatocellular carcinoma related protein 1 isoform 2
[Homo sapiens]
Length = 372
Score = 36.6 bits (83), Expect = 0.046
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 129 MSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQ--------QPGPSQDIKP 180
M + S L N F+ S L + + S FW +PP+L PS + P
Sbjct: 66 MDKQGVYVTSPLVNNFTMHSDLGKIIQSLLDEFWKNPPVLAPTSTAFPYLYSNPS-GMSP 124
Query: 181 FAQPAYPIQPPLPP 194
+A +P PP PP
Sbjct: 125 YASQGFPFLPPYPP 138
>gi|223555919 hepatocellular carcinoma related protein 1 isoform 1
[Homo sapiens]
Length = 397
Score = 36.6 bits (83), Expect = 0.046
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 129 MSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQ--------QPGPSQDIKP 180
M + S L N F+ S L + + S FW +PP+L PS + P
Sbjct: 91 MDKQGVYVTSPLVNNFTMHSDLGKIIQSLLDEFWKNPPVLAPTSTAFPYLYSNPS-GMSP 149
Query: 181 FAQPAYPIQPPLPP 194
+A +P PP PP
Sbjct: 150 YASQGFPFLPPYPP 163
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 36.6 bits (83), Expect = 0.046
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 150 LPQAVFSTSSRFWSSPPLLGQ---QPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPLP 206
L +A T S S PP LG+ P P Q P QP P P PT P AP P
Sbjct: 67 LSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPT-----PAAPPP 121
Query: 207 SAAASVP 213
++AS P
Sbjct: 122 PSSASPP 128
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 36.6 bits (83), Expect = 0.046
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 150 LPQAVFSTSSRFWSSPPLLGQ---QPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPLP 206
L +A T S S PP LG+ P P Q P QP P P PT P AP P
Sbjct: 67 LSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPT-----PAAPPP 121
Query: 207 SAAASVP 213
++AS P
Sbjct: 122 PSSASPP 128
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 36.6 bits (83), Expect = 0.046
Identities = 29/86 (33%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Query: 129 MSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPI 188
M SA I SA + P A S + PP G P P P QP +P+
Sbjct: 646 MPSAPITSADCPKPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFPM 705
Query: 189 QPPLPPTLSSYEPLAPLPSAAASVPV 214
PPLPP P P P A +V V
Sbjct: 706 PPPLPP------PPPPPPPAHPAVTV 725
>gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
Length = 1141
Score = 36.2 bits (82), Expect = 0.060
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 22/107 (20%)
Query: 130 SSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSP-------------------PLLGQ 170
SSAQ VS S Q PP+ P++ ++ F P P LG
Sbjct: 293 SSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGP 352
Query: 171 QPGPSQDIKPFAQPA-YPIQPPLPPTLSSYEPLAPLPSAAASVPVWQ 216
PGPS + P + PA +P+ P+P + PL P+ P+ Q
Sbjct: 353 VPGPS--VTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQ 397
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 36.2 bits (82), Expect = 0.060
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 128 SMSSAQIVSASVLQNKFSPP-SPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAY 186
S + ++ +LQ FSPP SP QA FS + SPP+ PSQ A P
Sbjct: 424 SPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA----SPPVSPSATPPSQAPPSLAAP-- 477
Query: 187 PIQ-PPLPPTLSSYEPLAPLPSAA 209
P+Q PP PP P A P A
Sbjct: 478 PLQVPPSPPASPPMSPSATPPPQA 501
Score = 31.6 bits (70), Expect = 1.5
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 145 SPPSPLPQAVFSTSSRFW----SSPPLLGQQPGPSQDIKPFAQPAYPIQ----PPLPPTL 196
+PPS P ++ + + +SPP+ P Q P A P P+Q PP P
Sbjct: 465 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP--PLQLAKPPPQAPPA 522
Query: 197 SSYEPLAPLPSAAASVP 213
+ PL LPS AS P
Sbjct: 523 LATPPLQALPSPPASFP 539
Score = 29.6 bits (65), Expect = 5.6
Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 146 PPSPLPQAVFSTSSRFWS-SPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAP 204
P S P A S S+ S +PP L P S A P P+ PP P S+ L
Sbjct: 298 PLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPL-PLAPPSP---SAPPSLQT 353
Query: 205 LPSAAASVPVWQDRTIASSRLRLLEYSAFMEVQRDPDTYSKHLFVHIGQTNPAFSDPPLE 264
LPS A+ P ++ S L+ +F+ P L Q PA + PPL+
Sbjct: 354 LPSPPATPPSQATTSLGSPTLQATH--SFL-----PSPPLSPLATPPPQAPPALALPPLQ 406
Query: 265 A 265
A
Sbjct: 407 A 407
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 36.2 bits (82), Expect = 0.060
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 128 SMSSAQIVSASVLQNKFSPP-SPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAY 186
S + ++ +LQ FSPP SP QA FS + SPP+ PSQ A P
Sbjct: 649 SPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA----SPPVSPSATPPSQAPPSLAAP-- 702
Query: 187 PIQ-PPLPPTLSSYEPLAPLPSAA 209
P+Q PP PP P A P A
Sbjct: 703 PLQVPPSPPASPPMSPSATPPPQA 726
Score = 33.5 bits (75), Expect = 0.39
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 135 VSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQ--PPL 192
++A LQ SPP+ P + +T PPLL P P + P P+ PP
Sbjct: 730 LAAPPLQVPPSPPASPPMSPSATPPP--RVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQ 787
Query: 193 PPTLSSYEPLAPLPSAAASVP 213
P + PL LPS AS P
Sbjct: 788 APPALATPPLQALPSPPASFP 808
Score = 32.3 bits (72), Expect = 0.86
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 145 SPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQ-PPLPPTLSSYEPLA 203
+PP P A+ S + SPPL P Q A P P+Q PP PP PLA
Sbjct: 589 TPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALP--PLQAPPSPPASPPLSPLA 646
Query: 204 -PLPSAAASVPV 214
P P A ++ V
Sbjct: 647 TPSPQAPNALAV 658
Score = 32.0 bits (71), Expect = 1.1
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 135 VSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQP---GPSQDIKPFAQPAYPIQPP 191
++A LQ SPP+ P + +T +PP L P PS P P+ P
Sbjct: 699 LAAPPLQVPPSPPASPPMSPSATPPP--QAPPPLAAPPLQVPPSPPASPPMSPSATPPPR 756
Query: 192 LPPTLSSYEPLAPLPSAAASVPV 214
+PP L++ PL PS AS+P+
Sbjct: 757 VPPLLAA-PPLQVPPSPPASLPM 778
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.060
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 128 SMSSAQIVSASVLQNKFSPP-SPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAY 186
S + ++ +LQ FSPP SP QA FS + SPP+ PSQ A P
Sbjct: 385 SPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA----SPPVSPSATPPSQAPPSLAAP-- 438
Query: 187 PIQ-PPLPPTLSSYEPLAPLPSAA 209
P+Q PP PP P A P A
Sbjct: 439 PLQVPPSPPASPPMSPSATPPPQA 462
Score = 31.6 bits (70), Expect = 1.5
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 145 SPPSPLPQAVFSTSSRFW----SSPPLLGQQPGPSQDIKPFAQPAYPIQ----PPLPPTL 196
+PPS P ++ + + +SPP+ P Q P A P P+Q PP P
Sbjct: 426 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP--PLQLAKPPPQAPPA 483
Query: 197 SSYEPLAPLPSAAASVP 213
+ PL LPS AS P
Sbjct: 484 LATPPLQALPSPPASFP 500
>gi|145977194 hypothetical protein LOC400793 isoform 2 [Homo
sapiens]
Length = 272
Score = 35.8 bits (81), Expect = 0.078
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 138 SVLQNKF---SPPSPL-----PQAVFSTSSRFWSSPPLLGQ-------QPGPSQDIKPFA 182
SVLQ F PP P+ P+A+ +T SS P+L PG +QD P A
Sbjct: 107 SVLQETFPRLDPPPPITRKRTPRALKTTQDMLISSQPVLSSLEYGTEPSPGQAQDSAPTA 166
Query: 183 QPAYPIQPPLP-PTLSSYEPLAPLPSAAASVPV 214
QP P P T+ E LP+ S+ V
Sbjct: 167 QPDVPADASQPEATMEREERGKVLPNGEVSLSV 199
>gi|207028635 hypothetical protein LOC400793 isoform 1 [Homo
sapiens]
Length = 315
Score = 35.8 bits (81), Expect = 0.078
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 138 SVLQNKF---SPPSPL-----PQAVFSTSSRFWSSPPLLGQ-------QPGPSQDIKPFA 182
SVLQ F PP P+ P+A+ +T SS P+L PG +QD P A
Sbjct: 150 SVLQETFPRLDPPPPITRKRTPRALKTTQDMLISSQPVLSSLEYGTEPSPGQAQDSAPTA 209
Query: 183 QPAYPIQPPLP-PTLSSYEPLAPLPSAAASVPV 214
QP P P T+ E LP+ S+ V
Sbjct: 210 QPDVPADASQPEATMEREERGKVLPNGEVSLSV 242
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 35.8 bits (81), Expect = 0.078
Identities = 37/127 (29%), Positives = 50/127 (39%), Gaps = 25/127 (19%)
Query: 115 DQVSKDKALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPG- 173
+Q+ K K S M+ S LQN S P P + PP +G+ PG
Sbjct: 1471 EQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPP------GSYRPPPPMGKPPGS 1524
Query: 174 -------PSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPLPSAAASVPVWQDRTIASSRLR 226
P++ P +P PI PP PP PL P P PV + +T A + R
Sbjct: 1525 IVRPSAPPARSSVPVTRPPVPIPPPPPP-----PPLPPPP------PVIKPQTSAVEQER 1573
Query: 227 LLEYSAF 233
E S +
Sbjct: 1574 WDEDSFY 1580
Score = 32.3 bits (72), Expect = 0.86
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 145 SPPS--PLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPL 202
SPP P+P + S+ + PP P +P+ PA P PP+ S L
Sbjct: 145 SPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSY---L 201
Query: 203 APLPSAAAS 211
AP PS ++S
Sbjct: 202 APTPSYSSS 210
Score = 31.6 bits (70), Expect = 1.5
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 100 KKVREYQVGIKAMNLDQVSKDKALQSMAS--MSSAQIVSASVLQNKFSPPSP-LPQAVFS 156
K+ + +Q +KA K + Q+M + M + + V ++ PP P +P V
Sbjct: 480 KQWKTWQGHMKATQSYLQEKVNSFQNMKNQYMGNMSMPPPFVPYSQMPPPLPTMPPPVLP 539
Query: 157 TSSRFWSSPPLLGQQPGPSQDIKPFAQPAYP--IQPP-LPPTLSSYEPLAPLP----SAA 209
S PP L P P P+ P + PP +PP+LSS P LP S+A
Sbjct: 540 PSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSA 599
Query: 210 ASVPVWQDRTIASS 223
PV +++S+
Sbjct: 600 GPPPVLPPPSLSST 613
>gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2)
interacting protein [Homo sapiens]
Length = 1211
Score = 35.4 bits (80), Expect = 0.10
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 146 PPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDI-KPFAQPAYPIQPPLPPTLSSYEPLAP 204
PP PLP SSR GP+Q + KP Q ++P+ PP PP L P AP
Sbjct: 758 PPPPLPFHDAKPSSRSSDG------SRGPAQALAKPLTQLSHPVPPPPPPPLPPPVPCAP 811
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 35.4 bits (80), Expect = 0.10
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 140 LQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSY 199
L+ + PP P P + ++S + PL QPGP+ + + QP +P + P+ P L
Sbjct: 477 LEQRSPPPPPPPPTLLNSSHPVPTQSPLPFTQPGPAFN-QQGQQPVFPRERPVRPALQPP 535
Query: 200 EPLAPL----PSAAASVP 213
P+ L P +A + P
Sbjct: 536 GPVGILHFSQPGSATTRP 553
Score = 29.3 bits (64), Expect = 7.3
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 24/88 (27%)
Query: 143 KFSPPSPLPQAVFSTSSRFWSSPPLLGQQ-----PGPSQDIKPF-----AQPAYPIQ--- 189
+F P PQ +S PP L Q P P QD PF +P +P
Sbjct: 418 RFPGPPEFPQHTPGPVPNSFSQPPRLPLQDQWRAPPPPQDRDPFFLGVSGEPRFPSHLFL 477
Query: 190 -------PPLPPT-LSSYEPL---APLP 206
PP PPT L+S P+ +PLP
Sbjct: 478 EQRSPPPPPPPPTLLNSSHPVPTQSPLP 505
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,715,230
Number of Sequences: 37866
Number of extensions: 876469
Number of successful extensions: 5259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 254
Number of HSP's that attempted gapping in prelim test: 4505
Number of HSP's gapped (non-prelim): 907
length of query: 435
length of database: 18,247,518
effective HSP length: 105
effective length of query: 330
effective length of database: 14,271,588
effective search space: 4709624040
effective search space used: 4709624040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.