Guide to the Human Genome
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Name: NETO1 Sequence: fasta or formatted (532aa) NCBI GI: 23510396
Description:

neuropilin- and tolloid-like protein 1 isoform 2 precursor

Referenced in:

Neurons

Other entries for this name:
alt prot [533aa] neuropilin- and tolloid-like protein 1 isoform 3 precursor
alt prot [156aa] neuropilin- and tolloid-like protein 1 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         27           2
 C cysteine            3.9         21           1
 D aspartate           5.5         29           2
 E glutamate           7.0         37           2
 F phenylalanine       5.3         28           2
 G glycine             5.8         31           2
 H histidine           2.6         14           2
 I isoleucine          6.8         36           3
 K lysine              6.4         34           2
 L leucine             6.2         33           2
 M methionine          2.3         12           1
 N asparagine          4.1         22           2
 P proline             5.6         30           2
 Q glutamine           3.9         21           2
 R arginine            5.3         28           2
 S serine              8.8         47           3
 T threonine           6.0         32           2
 V valine              5.3         28           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuropilin- and tolloid-like protein 1 isoform 2 pre... 
NETO1                 0.984   neuropilin- and tolloid-like protein 1 isoform 3 pre...
NETO2                 0.549   neuropilin- and tolloid-like protein 2 precursor [Ho...
NETO1                 0.284   neuropilin- and tolloid-like protein 1 isoform 1 pre...
CUBN                  0.094   cubilin 
TLL1                  0.084   tolloid-like 1 
NRP2                  0.082   neuropilin 2 isoform 3 precursor 
NRP2                  0.082   neuropilin 2 isoform 5 precursor 
NRP2                  0.082   neuropilin 2 isoform 1 precursor 
NRP2                  0.082   neuropilin 2 isoform 6 precursor 
NRP2                  0.082   neuropilin 2 isoform 4 precursor 
NRP2                  0.082   neuropilin 2 isoform 2 precursor 
TLL2                  0.081   tolloid-like 2 
BMP1                  0.077   bone morphogenetic protein 1 isoform 3 precursor [Hom...
BMP1                  0.072   bone morphogenetic protein 1 isoform 1 precursor [Hom...
BMP1                  0.072   bone morphogenetic protein 1 isoform 2 precursor [Hom...
NRP1                  0.071   neuropilin 1 isoform c 
NRP1                  0.071   neuropilin 1 isoform b 
NRP1                  0.071   neuropilin 1 isoform a 
MFRP                  0.071   membrane frizzled-related protein 
CDCP2                 0.063   CUB domain containing protein 2 
PCOLCE                0.051   procollagen C-endopeptidase enhancer 
CSMD2                 0.047   CUB and Sushi multiple domains 2 
CSMD1                 0.046   CUB and Sushi multiple domains 1 
PCOLCE2               0.046   procollagen C-endopeptidase enhancer 2 
MASP1                 0.043   mannan-binding lectin serine protease 1 isoform 3 [H...
MASP1                 0.043   mannan-binding lectin serine protease 1 isoform 2 pr...
MASP1                 0.043   mannan-binding lectin serine protease 1 isoform 1 pr...
LOC100291777          0.042   PREDICTED: similar to DMBT1 isoform 1 
LOC100291777          0.042   PREDICTED: similar to DMBT1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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