Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ETV1 Sequence: fasta or formatted (419aa) NCBI GI: 253683435
Description:

ets variant gene 1 isoform e

Referenced in:

Ets Family

Other entries for this name:
alt prot [454aa] ets variant gene 1 isoform b
alt prot [459aa] ets variant gene 1 isoform c
alt prot [459aa] ets variant gene 1 isoform c
alt prot [437aa] ets variant gene 1 isoform d
alt prot [374aa] ets variant gene 1 isoform f
alt prot [477aa] ets variant gene 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         19           2
 C cysteine            2.6         11           2
 D aspartate           4.8         20           2
 E glutamate           7.2         30           2
 F phenylalanine       5.5         23           2
 G glycine             5.0         21           2
 H histidine           3.8         16           2
 I isoleucine          2.9         12           1
 K lysine              4.5         19           2
 L leucine             5.7         24           2
 M methionine          4.3         18           1
 N asparagine          3.1         13           1
 P proline            12.4         52           3
 Q glutamine           5.5         23           1
 R arginine            6.0         25           2
 S serine              9.1         38           2
 T threonine           3.1         13           1
 V valine              4.1         17           2
 W tryptophan          0.7          3           1
 Y tyrosine            5.3         22           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ets variant gene 1 isoform e 
ETV1                  0.985   ets variant gene 1 isoform d 
ETV1                  0.953   ets variant gene 1 isoform c 
ETV1                  0.953   ets variant gene 1 isoform c 
ETV1                  0.952   ets variant gene 1 isoform a 
ETV1                  0.882   ets variant gene 1 isoform b 
ETV1                  0.730   ets variant gene 1 isoform f 
ETV5                  0.552   ets variant gene 5 (ets-related molecule) 
ETV4                  0.448   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.448   ets variant gene 4 (E1A enhancer binding protein, E1...
ETS1                  0.121   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.121   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.121   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS2                  0.118   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
ERG                   0.108   ets-related isoform 4 
ERG                   0.108   ets-related isoform 2 
ERG                   0.108   ets-related isoform 1 
ERG                   0.108   ets-related isoform 3 
ELK4                  0.107   ELK4 protein isoform b 
ELK4                  0.107   ELK4 protein isoform a 
FLI1                  0.105   Friend leukemia virus integration 1 
ELK1                  0.104   ELK1 protein 
ELK1                  0.104   ELK1 protein 
FEV                   0.102   FEV (ETS oncogene family) 
ELK3                  0.100   ELK3 protein 
GABPA                 0.099   GA binding protein transcription factor, alpha subun...
ETV2                  0.095   ets variant gene 2 
LOC390937             0.080   PREDICTED: similar to hCG2040171 
LOC390937             0.080   PREDICTED: similar to hCG2040171 
LOC390937             0.080   PREDICTED: similar to hCG2040171 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press