Guide to the Human Genome
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Name: ETV1 Sequence: fasta or formatted (459aa) NCBI GI: 253683431
Description:

ets variant gene 1 isoform c

Referenced in:

Ets Family

Other entries for this name:
alt prot [454aa] ets variant gene 1 isoform b
alt mRNA [459aa] ets variant gene 1 isoform c
alt prot [437aa] ets variant gene 1 isoform d
alt prot [419aa] ets variant gene 1 isoform e
alt prot [374aa] ets variant gene 1 isoform f
alt prot [477aa] ets variant gene 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         20           2
 C cysteine            2.4         11           2
 D aspartate           5.2         24           2
 E glutamate           7.6         35           2
 F phenylalanine       5.2         24           1
 G glycine             5.0         23           2
 H histidine           3.5         16           2
 I isoleucine          2.8         13           1
 K lysine              4.8         22           2
 L leucine             5.7         26           2
 M methionine          4.1         19           1
 N asparagine          3.9         18           1
 P proline            11.3         52           3
 Q glutamine           5.9         27           2
 R arginine            6.3         29           2
 S serine              8.3         38           2
 T threonine           3.3         15           1
 V valine              4.1         19           2
 W tryptophan          0.9          4           1
 Y tyrosine            5.2         24           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ets variant gene 1 isoform c 
ETV1                  1.000   ets variant gene 1 isoform c 
ETV1                  0.987   ets variant gene 1 isoform a 
ETV1                  0.923   ets variant gene 1 isoform b 
ETV1                  0.870   ets variant gene 1 isoform e 
ETV1                  0.869   ets variant gene 1 isoform d 
ETV1                  0.635   ets variant gene 1 isoform f 
ETV5                  0.578   ets variant gene 5 (ets-related molecule) 
ETV4                  0.436   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.436   ets variant gene 4 (E1A enhancer binding protein, E1...
ETS1                  0.111   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.111   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.111   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS2                  0.108   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
ERG                   0.098   ets-related isoform 4 
ERG                   0.098   ets-related isoform 2 
ERG                   0.098   ets-related isoform 1 
ERG                   0.098   ets-related isoform 3 
ELK4                  0.097   ELK4 protein isoform b 
ELK4                  0.097   ELK4 protein isoform a 
FLI1                  0.096   Friend leukemia virus integration 1 
ELK1                  0.095   ELK1 protein 
ELK1                  0.095   ELK1 protein 
FEV                   0.093   FEV (ETS oncogene family) 
ELK3                  0.091   ELK3 protein 
GABPA                 0.090   GA binding protein transcription factor, alpha subun...
ETV2                  0.087   ets variant gene 2 
LOC390937             0.073   PREDICTED: similar to hCG2040171 
LOC390937             0.073   PREDICTED: similar to hCG2040171 
LOC390937             0.073   PREDICTED: similar to hCG2040171 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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