Guide to the Human Genome
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Name: GIT1 Sequence: fasta or formatted (761aa) NCBI GI: 41393573
Description:

G protein-coupled receptor kinase interactor 1 isoform 2

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [770aa] G protein-coupled receptor kinase interactor 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         66           2
 C cysteine            1.7         13           2
 D aspartate           6.4         49           3
 E glutamate           7.0         53           2
 F phenylalanine       2.5         19           2
 G glycine             5.3         40           2
 H histidine           3.5         27           2
 I isoleucine          2.8         21           2
 K lysine              5.3         40           3
 L leucine            11.6         88           2
 M methionine          1.3         10           1
 N asparagine          2.6         20           1
 P proline             6.7         51           2
 Q glutamine           5.5         42           2
 R arginine            7.0         53           2
 S serine              9.2         70           2
 T threonine           5.1         39           2
 V valine              5.3         40           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor kinase interactor 1 isofo... 
GIT1                  0.995   G protein-coupled receptor kinase interactor 1 isof...
GIT2                  0.622   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.609   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.552   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.551   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.473   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.462   G protein-coupled receptor kinase interacting ArfGAP...
AGAP3                 0.070   centaurin, gamma 3 isoform a 
AGAP1                 0.068   centaurin, gamma 2 isoform 2 
AGAP1                 0.068   centaurin, gamma 2 isoform 1 
AGAP6                 0.066   centaurin, gamma-like family, member 3 
AGAP2                 0.066   centaurin, gamma 1 isoform PIKE-L 
AGAP2                 0.066   centaurin, gamma 1 isoform PIKE-S 
AGAP7                 0.066   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP4                 0.065   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP8                 0.063   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP11                0.062   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP5                 0.060   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.055   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.055   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
ARAP1                 0.041   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ARAP1                 0.041   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ACAP1                 0.040   centaurin beta1 
ACAP3                 0.037   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ARAP2                 0.036   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
LOC100294038          0.036   PREDICTED: similar to centaurin, gamma-like family,...
ACAP2                 0.035   centaurin, beta 2 
ASAP2                 0.031   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP2                 0.031   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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