Guide to the Human Genome
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Name: TRNT1 Sequence: fasta or formatted (434aa) NCBI GI: 155030240
Description:

tRNA nucleotidyl transferase, CCA-adding, 1

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         21           1
 C cysteine            0.9          4           1
 D aspartate           6.9         30           2
 E glutamate           7.4         32           2
 F phenylalanine       4.8         21           1
 G glycine             6.2         27           2
 H histidine           3.0         13           1
 I isoleucine          6.5         28           2
 K lysine              8.5         37           2
 L leucine            11.8         51           2
 M methionine          1.8          8           1
 N asparagine          3.7         16           2
 P proline             3.7         16           2
 Q glutamine           4.1         18           2
 R arginine            6.2         27           2
 S serine              4.6         20           2
 T threonine           5.5         24           2
 V valine              5.1         22           1
 W tryptophan          1.4          6           1
 Y tyrosine            3.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tRNA nucleotidyl transferase, CCA-adding, 1 
OSBP                  0.011   oxysterol binding protein 
LOC100294407          0.008   PREDICTED: similar to hCG2039376 
USP32                 0.008   ubiquitin specific protease 32 
DST                   0.008   dystonin isoform 1eB precursor 
MTMR2                 0.006   myotubularin-related protein 2 isoform 1 
MTMR2                 0.006   myotubularin-related protein 2 isoform 2 
MTMR2                 0.006   myotubularin-related protein 2 isoform 2 
RABEP1                0.006   rabaptin, RAB GTPase binding effector protein 1 iso...
RABEP1                0.006   rabaptin, RAB GTPase binding effector protein 1 isof...
RPE                   0.005   ribulose-5-phosphate-3-epimerase isoform 1 
SRM                   0.005   spermidine synthase 
PSMD1                 0.005   proteasome 26S non-ATPase subunit 1 
DOPEY1                0.005   dopey family member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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