BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 [Homo sapiens] (406 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ... 792 0.0 gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ... 769 0.0 gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapi... 313 2e-85 gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap... 231 1e-60 gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 219 5e-57 gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 203 3e-52 gi|13514831 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapi... 198 6e-51 gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens] 193 3e-49 gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens] 193 3e-49 gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens] 190 2e-48 gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens] 189 4e-48 gi|38327634 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapi... 184 1e-46 gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ... 184 1e-46 gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1... 184 1e-46 gi|7661920 eukaryotic translation initiation factor 4A, isoform ... 183 2e-46 gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap... 182 5e-46 gi|21071032 DEAD-box protein abstrakt [Homo sapiens] 181 1e-45 gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap... 181 1e-45 gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens] 180 2e-45 gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi... 176 4e-44 gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... 175 6e-44 gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s... 175 6e-44 gi|41327779 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapi... 173 2e-43 gi|4503529 eukaryotic translation initiation factor 4A isoform 1... 172 4e-43 gi|4758112 HLA-B associated transcript 1 [Homo sapiens] 172 5e-43 gi|18375623 HLA-B associated transcript 1 [Homo sapiens] 172 5e-43 gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... 172 5e-43 gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... 172 5e-43 gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo sapi... 169 4e-42 gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapi... 164 2e-40 >gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 [Homo sapiens] Length = 406 Score = 792 bits (2046), Expect = 0.0 Identities = 406/406 (100%), Positives = 406/406 (100%) Query: 1 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ 60 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ Sbjct: 1 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ 60 Query: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG 120 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG 120 Query: 121 VQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL 180 VQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL Sbjct: 121 VQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL 180 Query: 181 NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQ 240 NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQ Sbjct: 181 NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQ 240 Query: 241 YYIFIPSKFKSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 300 YYIFIPSKFKSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH Sbjct: 241 YYIFIPSKFKSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 300 Query: 301 RVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRF 360 RVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRF Sbjct: 301 RVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRF 360 Query: 361 ARMELREHGEKKKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR 406 ARMELREHGEKKKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR Sbjct: 361 ARMELREHGEKKKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR 406 >gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 [Homo sapiens] Length = 455 Score = 769 bits (1986), Expect = 0.0 Identities = 406/455 (89%), Positives = 406/455 (89%), Gaps = 49/455 (10%) Query: 1 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ 60 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ Sbjct: 1 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ 60 Query: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG 120 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG 120 Query: 121 VQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL 180 VQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL Sbjct: 121 VQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL 180 Query: 181 NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQ 240 NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQ Sbjct: 181 NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQ 240 Query: 241 YYIFIPSKFK-------------------------------------------------S 251 YYIFIPSKFK S Sbjct: 241 YYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQS 300 Query: 252 KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRS 311 KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRS Sbjct: 301 KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRS 360 Query: 312 GKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEK 371 GKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEK Sbjct: 361 GKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEK 420 Query: 372 KKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR 406 KKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR Sbjct: 421 KKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR 455 >gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapiens] Length = 483 Score = 313 bits (802), Expect = 2e-85 Identities = 178/439 (40%), Positives = 250/439 (56%), Gaps = 58/439 (13%) Query: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85 F +LG++ L E C QLG +PT +Q+ IP L+GRD +G A+TGSGKT AF LPIL Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63 Query: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHI 145 L E P +F LVLTPTRELA+QI+EQF LG +G++ +IVGG+D ++Q+L L++KPH+ Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123 Query: 146 IIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNM---DFETEVDKILKVIPRDRKTF 202 +IATPGRL DHL ++ F+++ +++LVMDEADR+L DF +++ IL +P R+T Sbjct: 124 VIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTL 183 Query: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK------------ 250 LFSAT+T +++LQ A P + TVE+L Q Y+ +P K K Sbjct: 184 LFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQ 243 Query: 251 -----------------------------------------SKRLGSLNKFKAKARSILL 269 +R +L KFK+ IL+ Sbjct: 244 DEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILI 303 Query: 270 ATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 329 ATDVASRGLDIP V VV+N + P K YIHRVGRTARAGR G+AIT VTQYD+ L I Sbjct: 304 ATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVHAI 363 Query: 330 EHLIGKKLPGFPTQDDEVMMLTERVAEAQRFA--RMELREHGEKKKRSREDAGDNDDTEG 387 E I KKL F ++ EV+ + +V +R ++E EKK+ ++ + + Sbjct: 364 EEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLILEGKDP 423 Query: 388 AIGVRNKVAGGKMKKRKGR 406 + + K K+K++ R Sbjct: 424 DLEAKRKAELAKIKQKNRR 442 >gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens] Length = 796 Score = 231 bits (588), Expect = 1e-60 Identities = 141/417 (33%), Positives = 221/417 (52%), Gaps = 55/417 (13%) Query: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80 +E +F+D+ ++ L +A +G+ +PT IQ IP+ L G+DI A TG+GKT AFAL Sbjct: 215 DENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFAL 274 Query: 81 PILNALLETPQRL---FALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137 P+L L+ P++ LVL PTREL Q+ L + + + VGG+D SQ Sbjct: 275 PVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEA 334 Query: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197 AL P I+IATPGRLIDHL N F+L +++ L++DEADR+L+ FE ++ +I+++ Sbjct: 335 ALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSH 394 Query: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI-------------- 243 R+T LFSATMT +V+ L +LKNPV+ V+S L+Q +I Sbjct: 395 HRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIV 454 Query: 244 --------------FIPSKFKSKR------------------------LGSLNKFKAKAR 265 F +K ++ R L +L +FK + Sbjct: 455 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 514 Query: 266 SILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVEL 325 IL+ATDVA+RGLDI V V+NF +P K Y+HRVGRTARAGR+G++++ V + + ++ Sbjct: 515 DILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKM 574 Query: 326 FQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGDN 382 + I + D ++ +++ + ++ L+ E+K+ + +A N Sbjct: 575 LKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEEKEMQQSEAQIN 631 >gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapiens] Length = 820 Score = 219 bits (557), Expect = 5e-57 Identities = 138/394 (35%), Positives = 206/394 (52%), Gaps = 85/394 (21%) Query: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83 +++KD + + E D+ G+ +PT IQ +AIP+ LQ RDIIG+AETGSGKT AF +P+L Sbjct: 391 RSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLL 450 Query: 84 ---------NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMS 134 + + E+ Q +A++L PTRELA QI E+ G +G+++ ++GGI Sbjct: 451 VWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISRED 510 Query: 135 QSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV 194 Q L I+IATPGRLID LEN + L Y+V+DEADR+++M FE +V KIL+ Sbjct: 511 QGFRLRMGCEIVIATPGRLIDVLEN-RYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH 569 Query: 195 IP--------------------------RDRKTFLFSATMTKKVQKLQRAALKNPVKCAV 228 +P + R+T +F+ATM V++L R+ L+ P + Sbjct: 570 MPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYI 629 Query: 229 SSKYQTVEKLQQYYIFIPSKFKSKRL---------------------------------- 254 S + E+++Q + K K+L Sbjct: 630 GSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGY 689 Query: 255 ---------------GSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYI 299 +L+ KA A+ IL+ATDVA RG+DI V +VVN+D+ + +DYI Sbjct: 690 NACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYI 749 Query: 300 HRVGRTARAGRSGKAITFVTQYDVELFQRIEHLI 333 HR+GRT RAG+SG AITF+T+ D +F ++ I Sbjct: 750 HRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAI 783 >gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens] Length = 1031 Score = 203 bits (516), Expect = 3e-52 Identities = 138/447 (30%), Positives = 221/447 (49%), Gaps = 76/447 (17%) Query: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83 K++ G++ + + + G+ KPT IQ +AIP + GRD+IG+A+TGSGKT AF LP+ Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431 Query: 84 NAL-----LETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 138 + LE + A+++TPTRELA QI+++ + ++G++ + GG Q Sbjct: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAE 491 Query: 139 LAKKPHIIIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKVIP 196 L + II+ TPGR+ID L G NLR + Y+V+DEADR+ +M FE +V +I+ + Sbjct: 492 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVR 551 Query: 197 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKSKRL-- 254 DR+T +FSAT + ++ L R L P++ V + ++Q I I + K +L Sbjct: 552 PDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLE 611 Query: 255 --------GS----------------------------------------LNKFKAKARS 266 GS +N FK Sbjct: 612 LLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCK 671 Query: 267 ILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ----YD 322 +L+AT VA+RGLD+ H+ +VVN+ P H +DY+HR GRT RAG G A TF+T+ Y Sbjct: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731 Query: 323 VELFQRIEHLIGKKLP--------GFPTQDDEVMMLTERVA----EAQRFARMELREHGE 370 ++ + +E L G +P F Q + ++ + + +F E E Sbjct: 732 GDIIKALE-LSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFDETEQALANE 790 Query: 371 KKKRSREDAG--DNDDTEGAIGVRNKV 395 +KK + G D+DD + A+ + ++ Sbjct: 791 RKKLQKAALGLQDSDDEDAAVDIDEQI 817 >gi|13514831 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens] Length = 875 Score = 198 bits (504), Expect = 6e-51 Identities = 132/416 (31%), Positives = 211/416 (50%), Gaps = 66/416 (15%) Query: 18 VEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 77 + E F D ++ + + + T+IQ + I LALQG+D++G A+TGSGKT A Sbjct: 63 INVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLA 122 Query: 78 FALPILNALLE----TPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSM 133 F +P+L AL + L L+++PTRELA+Q E +G + + +I+GG D Sbjct: 123 FLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLK 182 Query: 134 SQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 193 ++ + +I++ TPGRL+ H++ T F+ L+ LV+DEADRIL+M F ++ +++ Sbjct: 183 HEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIE 241 Query: 194 VIPRDRKTFLFSATMTKKVQKLQRAALKNP--VKCAVSSKYQTVEKLQQYYI-------- 243 +P+ R+T LFSAT TK V+ L R +LKNP V +KY T L+Q YI Sbjct: 242 NLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKI 301 Query: 244 -----FIPSKFKSK--------------------------------------RLGSLNKF 260 F+ S K K R+ N+F Sbjct: 302 SVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEF 361 Query: 261 KAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ 320 K ++L ATD+A+RGLD P V+ V+ FD P + YIHR GRTAR G+A+ + Sbjct: 362 VRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLP 421 Query: 321 YDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSR 376 + + ++ L+ KK+P E+ + E++ + Q+ L + + K+R++ Sbjct: 422 SEKAM---VQQLLQKKVP-----VKEIKINPEKLIDVQKKLESILAQDQDLKERAQ 469 >gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens] Length = 938 Score = 193 bits (490), Expect = 3e-49 Identities = 122/354 (34%), Positives = 180/354 (50%), Gaps = 57/354 (16%) Query: 25 TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILN 84 +F G + L + +T+PT IQ + +P+AL GRD+IG+A+TGSGKT AF P+L Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313 Query: 85 AL-----LETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139 + LE A+++ PTREL QI + + G + ++S + GG Q+ AL Sbjct: 314 HIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKAL 373 Query: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199 + I++ TPGRLIDH++ K NL+ + YLV DEADR+ +M FE +V I + DR Sbjct: 374 QEGAEIVVCTPGRLIDHVKK-KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR 432 Query: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFI---PSKF------- 249 +T LFSAT KK++KL R L +P++ + E + Q + PSK+ Sbjct: 433 QTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRL 492 Query: 250 -----------------------------------------KSKRLGSLNKFKAKARSIL 268 +S+R ++ FK K +L Sbjct: 493 VEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVL 552 Query: 269 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 322 +ATDVA+RGLDIP + V+N+D+ + HR+GRT RAG G A T +T D Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKD 606 >gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens] Length = 938 Score = 193 bits (490), Expect = 3e-49 Identities = 122/354 (34%), Positives = 180/354 (50%), Gaps = 57/354 (16%) Query: 25 TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILN 84 +F G + L + +T+PT IQ + +P+AL GRD+IG+A+TGSGKT AF P+L Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313 Query: 85 AL-----LETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139 + LE A+++ PTREL QI + + G + ++S + GG Q+ AL Sbjct: 314 HIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKAL 373 Query: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199 + I++ TPGRLIDH++ K NL+ + YLV DEADR+ +M FE +V I + DR Sbjct: 374 QEGAEIVVCTPGRLIDHVKK-KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR 432 Query: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFI---PSKF------- 249 +T LFSAT KK++KL R L +P++ + E + Q + PSK+ Sbjct: 433 QTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRL 492 Query: 250 -----------------------------------------KSKRLGSLNKFKAKARSIL 268 +S+R ++ FK K +L Sbjct: 493 VEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVL 552 Query: 269 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 322 +ATDVA+RGLDIP + V+N+D+ + HR+GRT RAG G A T +T D Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKD 606 >gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens] Length = 731 Score = 190 bits (482), Expect = 2e-48 Identities = 141/397 (35%), Positives = 195/397 (49%), Gaps = 83/397 (20%) Query: 44 WTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL-----NALLETPQRLFALVL 98 +T+PT IQ + PLAL GRD++G+A+TGSGKT A+ LP + LE LVL Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 250 Query: 99 TPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLE 158 PTRELA Q+ + + G ++S I GG Q L + I IATPGRLID LE Sbjct: 251 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 310 Query: 159 NTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRA 218 + K NLR YLV+DEADR+L+M FE ++ KI+ I DR+T ++SAT K+V++L Sbjct: 311 SGKT-NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAED 369 Query: 219 ALKNPVK--------------------CAVSSKYQTV---------EKLQQYYIFIPS-- 247 L++ + C S K + EK + IF+ + Sbjct: 370 FLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKR 429 Query: 248 ----------------------KFKSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDV 285 K + +R LN+F++ IL+ATDVASRGLD+ V Sbjct: 430 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKF 489 Query: 286 VVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDD 345 V+N+D P S+DY+HR+GRTAR+ G A TF T PG Q Sbjct: 490 VINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT------------------PGNLKQAR 531 Query: 346 EVMMLTERVAEAQRFARMELREH------GEKKKRSR 376 E++ + E +A M+L +H G K RSR Sbjct: 532 ELIKVLEEANQAINPKLMQLVDHRGGGGGGGKGGRSR 568 >gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens] Length = 729 Score = 189 bits (480), Expect = 4e-48 Identities = 136/383 (35%), Positives = 190/383 (49%), Gaps = 77/383 (20%) Query: 44 WTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL-----NALLETPQRLFALVL 98 +T+PT IQ + PLAL GRD++G+A+TGSGKT A+ LP + LE LVL Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 250 Query: 99 TPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLE 158 PTRELA Q+ + + G ++S I GG Q L + I IATPGRLID LE Sbjct: 251 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 310 Query: 159 NTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRA 218 + K NLR YLV+DEADR+L+M FE ++ KI+ I DR+T ++SAT K+V++L Sbjct: 311 SGKT-NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAED 369 Query: 219 ALKNPVK--------------------CAVSSKYQTV---------EKLQQYYIFIPS-- 247 L++ + C S K + EK + IF+ + Sbjct: 370 FLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKR 429 Query: 248 ----------------------KFKSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDV 285 K + +R LN+F++ IL+ATDVASRGLD+ V Sbjct: 430 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKF 489 Query: 286 VVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDD 345 V+N+D P S+DY+HR+GRTAR+ G A TF T PG Q Sbjct: 490 VINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT------------------PGNLKQAR 531 Query: 346 EVMMLTERVAEAQRFARMELREH 368 E++ + E +A M+L +H Sbjct: 532 ELIKVLEEANQAINPKLMQLVDH 554 >gi|38327634 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens] Length = 670 Score = 184 bits (468), Expect = 1e-46 Identities = 125/339 (36%), Positives = 185/339 (54%), Gaps = 57/339 (16%) Query: 31 VTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET- 89 V + +A ++G+T T+IQ ++I L+GRD++ A+TGSGKT AF +P + +++ Sbjct: 186 VNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR 245 Query: 90 --PQR-LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHII 146 P+ L+L+PTRELA Q + L + +I+GG + +++ L +II Sbjct: 246 FMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINII 305 Query: 147 IATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSA 206 +ATPGRL+DH++NT GF + L+ LV+DEADRIL++ FE E+ +I+K++P R+T LFSA Sbjct: 306 VATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSA 365 Query: 207 TMTKKVQKLQRAAL-KNPVKCAV--SSKYQTVEKLQQYYIFIPSK---------FKSKRL 254 T T+KV+ L R +L K P+ V TV+ L+Q Y+ PS+ K R Sbjct: 366 TQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRK 425 Query: 255 GSLNKFKAKARSI----------------------------------------LLATDVA 274 L F + S+ LL TDVA Sbjct: 426 KKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVA 485 Query: 275 SRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGK 313 +RGLDIP VD +V +D P K+YIHRVGRTAR G +G+ Sbjct: 486 ARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGR 523 >gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 [Homo sapiens] Length = 881 Score = 184 bits (468), Expect = 1e-46 Identities = 122/374 (32%), Positives = 193/374 (51%), Gaps = 58/374 (15%) Query: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78 +++++ F+ +G++ + + + G+ PT IQ + IP+ L G+D++ +A TGSGKT F Sbjct: 91 KKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACF 150 Query: 79 ALPILNAL----LETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMS 134 LP+ L +T R AL+L+PTRELA Q + + LG G+++A+I+GG Sbjct: 151 LLPMFERLKTHSAQTGAR--ALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMED 208 Query: 135 QSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV 194 Q AL + P IIIATPGRL+ H+ L++++Y+V DEADR+ M F ++ +I+ Sbjct: 209 QFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIAR 267 Query: 195 IPRDRKTFLFSATMTKKVQKLQRAALKNPV--KCAVSSK--------------------- 231 +P +T LFSAT+ K + + RA L PV + V +K Sbjct: 268 LPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTKAAVL 327 Query: 232 ----YQTVEKLQQYYIFIPSKFKSKRLG------------------------SLNKFKAK 263 + V Q +F+ +K ++ L +L KF Sbjct: 328 LHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLG 387 Query: 264 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 323 S L+ TD+A+RGLDIP +D V+N+ P K ++HRVGR ARAGRSG A + V ++ Sbjct: 388 KCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEI 447 Query: 324 ELFQRIEHLIGKKL 337 + +G+ L Sbjct: 448 PYLLDLHLFLGRSL 461 >gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1 [Homo sapiens] Length = 882 Score = 184 bits (468), Expect = 1e-46 Identities = 122/374 (32%), Positives = 193/374 (51%), Gaps = 58/374 (15%) Query: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78 +++++ F+ +G++ + + + G+ PT IQ + IP+ L G+D++ +A TGSGKT F Sbjct: 91 KKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACF 150 Query: 79 ALPILNAL----LETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMS 134 LP+ L +T R AL+L+PTRELA Q + + LG G+++A+I+GG Sbjct: 151 LLPMFERLKTHSAQTGAR--ALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMED 208 Query: 135 QSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV 194 Q AL + P IIIATPGRL+ H+ L++++Y+V DEADR+ M F ++ +I+ Sbjct: 209 QFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIAR 267 Query: 195 IPRDRKTFLFSATMTKKVQKLQRAALKNPV--KCAVSSK--------------------- 231 +P +T LFSAT+ K + + RA L PV + V +K Sbjct: 268 LPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTKAAVL 327 Query: 232 ----YQTVEKLQQYYIFIPSKFKSKRLG------------------------SLNKFKAK 263 + V Q +F+ +K ++ L +L KF Sbjct: 328 LHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLG 387 Query: 264 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 323 S L+ TD+A+RGLDIP +D V+N+ P K ++HRVGR ARAGRSG A + V ++ Sbjct: 388 KCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEI 447 Query: 324 ELFQRIEHLIGKKL 337 + +G+ L Sbjct: 448 PYLLDLHLFLGRSL 461 >gi|7661920 eukaryotic translation initiation factor 4A, isoform 3 [Homo sapiens] Length = 411 Score = 183 bits (465), Expect = 2e-46 Identities = 115/395 (29%), Positives = 193/395 (48%), Gaps = 58/395 (14%) Query: 5 EEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64 +E D + E + T TF +G+ + L G+ KP+ IQ AI ++GRD+ Sbjct: 19 KEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDV 78 Query: 65 IGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSA 124 I +++G+GKT F++ +L L + AL+L PTRELA QI + ALG + VQ Sbjct: 79 IAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCH 138 Query: 125 VIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDF 184 +GG + L H++ TPGR+ D + + RA+K LV+DEAD +LN F Sbjct: 139 ACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRR-RSLRTRAIKMLVLDEADEMLNKGF 197 Query: 185 ETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYY-- 242 + ++ + + +P + L SAT+ ++ ++ + +P++ V T+E ++Q++ Sbjct: 198 KEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVA 257 Query: 243 ------------------------IFIPSKFK------------------------SKRL 254 IF +K K +R Sbjct: 258 VEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERE 317 Query: 255 GSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKA 314 + +F++ A +L++TDV +RGLD+P V +++N+D+P + + YIHR+GR+ R GR G A Sbjct: 318 SIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVA 377 Query: 315 ITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMM 349 I FV D+ + + IE + TQ DE+ M Sbjct: 378 INFVKNDDIRILRDIEQY-------YSTQIDEMPM 405 >gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sapiens] Length = 648 Score = 182 bits (462), Expect = 5e-46 Identities = 137/397 (34%), Positives = 200/397 (50%), Gaps = 65/397 (16%) Query: 37 EACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQ----- 91 E + G+ KPT IQ +A P+ LQG D+IG+A+TG+GKT + +P L+ P Sbjct: 255 ENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQR 314 Query: 92 -RLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATP 150 R LVLTPTRELA Q+ + S G++S + GG + Q L K IIIATP Sbjct: 315 NRPGMLVLTPTRELALQVEGEC-CKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATP 373 Query: 151 GRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTK 210 GRL D L+ + NL+ + YLV+DEAD++L+M FE ++ KIL + DR+T + SAT Sbjct: 374 GRLND-LQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPH 432 Query: 211 KVQKLQRAALKNPV--------KCAVSSK-------------------YQTVEKLQQYYI 243 V +L ++ LK P+ AVSS Q++ + + Sbjct: 433 SVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIV 492 Query: 244 FIPSKFKSKRLGS------------------------LNKFKAKARSILLATDVASRGLD 279 F+ K + L S L FK IL+ATD+ASRGLD Sbjct: 493 FVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLD 552 Query: 280 IPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPG 339 + V V NFD P + ++Y+HR+GRT RAGR+G +IT +T+ D + + +++ + Sbjct: 553 VHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQS 612 Query: 340 FPTQDDEVMMLTERVAEAQRFARMEL---REHGEKKK 373 P +E++ + ER Q+ ME R G KK Sbjct: 613 IP---EELVSMAERFKAHQQKREMERKMERPQGRPKK 646 >gi|21071032 DEAD-box protein abstrakt [Homo sapiens] Length = 622 Score = 181 bits (459), Expect = 1e-45 Identities = 118/359 (32%), Positives = 183/359 (50%), Gaps = 63/359 (17%) Query: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83 K+FK++ + + G PT IQI+ IP L GRD+IG+A TGSGKT F LP++ Sbjct: 181 KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 240 Query: 84 NALLETPQRL--------FALVLTPTRELAFQ---ISEQFEAL---GSSIGVQSAVIVGG 129 LE +RL + L++ P+RELA Q I E + L SS ++ A+ +GG Sbjct: 241 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG 300 Query: 130 IDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVD 189 + Q + H+++ATPGRL+D L+ K +L +YL +DEADR+++M FE ++ Sbjct: 301 MSVKEQMETIRHGVHMMVATPGRLMDLLQK-KMVSLDICRYLALDEADRMIDMGFEGDIR 359 Query: 190 KILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAV--------------------- 228 I R+T LFSATM KK+Q ++AL PV V Sbjct: 360 TIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEA 419 Query: 229 -------------------SSKYQTVEKLQQYYI--------FIPSKFKSKRLGSLNKFK 261 + K V+ + +Y + K + +R ++ F+ Sbjct: 420 KMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFR 479 Query: 262 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ 320 + +L+ATDVAS+GLD P + V+N+D+P ++Y+HR+GRT R+G +G A TF+ + Sbjct: 480 EGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINK 538 >gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sapiens] Length = 619 Score = 181 bits (458), Expect = 1e-45 Identities = 119/368 (32%), Positives = 188/368 (51%), Gaps = 60/368 (16%) Query: 12 EASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETG 71 E ++PI++ F+ + +VL + G+ PT IQ++ IP+ L GRDI+ A+TG Sbjct: 197 EVTRPIID------FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTG 250 Query: 72 SGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGI 130 SGKT AF LP++ L + AL+LTPTRELA QI Q + L S + +++ ++VGG+ Sbjct: 251 SGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGL 310 Query: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190 Q L + +IIATPGRL+D ++ + L +K +V+DEAD +L M F+ +V Sbjct: 311 PLPPQLYRLQQHVKVIIATPGRLLDIIKQS-SVELCGVKIVVVDEADTMLKMGFQQQVLD 369 Query: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250 IL+ IP D +T L SAT+ +++L L NPV+ K ++Q +++ K Sbjct: 370 ILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAK 429 Query: 251 SKRLGSL-----------------------------------------NKFKAKARSIL- 268 K+L + K + + ++IL Sbjct: 430 KKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILK 489 Query: 269 ----------LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFV 318 ++T V RGLD+ V +VVNFD+P+ +Y+H++GR R G++G AITF+ Sbjct: 490 GLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFI 549 Query: 319 TQYDVELF 326 LF Sbjct: 550 NNNSKRLF 557 >gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens] Length = 614 Score = 180 bits (456), Expect = 2e-45 Identities = 122/339 (35%), Positives = 174/339 (51%), Gaps = 59/339 (17%) Query: 44 WTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL-----NALLETPQRLFALVL 98 +T+PT IQ + P+AL G D++G+A+TGSGKT ++ LP + LE LVL Sbjct: 114 FTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVL 173 Query: 99 TPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLE 158 PTRELA Q+ + + ++S I GG Q L + I IATPGRLID LE Sbjct: 174 APTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 233 Query: 159 NTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRA 218 K NLR YLV+DEADR+L+M FE ++ KI+ I DR+T ++SAT K+V++L Sbjct: 234 CGKT-NLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAED 292 Query: 219 ALKNPVKCAVSSKYQTV-----------------------------EKLQQYYIFIPSKF 249 LK+ + + + + EK + +F+ +K Sbjct: 293 FLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKR 352 Query: 250 KSKRLGS------------------------LNKFKAKARSILLATDVASRGLDIPHVDV 285 + L LN+FK IL+ATDVASRGLD+ V Sbjct: 353 RCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKF 412 Query: 286 VVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVE 324 V+N+D P S+DYIHR+GRTAR+ ++G A TF T +++ Sbjct: 413 VINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIK 451 >gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapiens] Length = 483 Score = 176 bits (445), Expect = 4e-44 Identities = 116/382 (30%), Positives = 196/382 (51%), Gaps = 54/382 (14%) Query: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85 F+D + L ++GW KP+ IQ E+IP+AL GRDI+ A+ G+GK+GA+ +P+L Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157 Query: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKKPH 144 L + A+V+ PTRELA Q+S+ + + G + GG + + L H Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217 Query: 145 IIIATPGRLIDHLENTKGF-NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFL 203 ++IATPGR++D ++ KG + ++ +V+DEAD++L+ DF ++ I+ +P++R+ L Sbjct: 218 VVIATPGRILDLIK--KGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILL 275 Query: 204 FSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK------------- 250 +SAT VQK + L+ P + + + T++ + QYY ++ + K Sbjct: 276 YSATFPLSVQKFMNSHLQKPYEINLMEEL-TLKGVTQYYAYVTERQKVHCLNTLFSRLQI 334 Query: 251 ---------SKRLGSLNK-----------FKAKARS----------------ILLATDVA 274 S+R+ L K AK R L+ TD+ Sbjct: 335 NQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLF 394 Query: 275 SRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIG 334 +RG+DI V+VV+NFD P ++ Y+HR+GR+ R G G AI +T D + IE +G Sbjct: 395 TRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLG 454 Query: 335 KKLPGFPTQDDEVMMLTERVAE 356 ++ P+ D+ + + E +E Sbjct: 455 TEIKPIPSNIDKSLYVAEYHSE 476 >gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo sapiens] Length = 662 Score = 175 bits (444), Expect = 6e-44 Identities = 119/382 (31%), Positives = 188/382 (49%), Gaps = 73/382 (19%) Query: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83 ++F D+ + +++ + +T+PT +Q AIP+ + RD++ A+TGSGKT AF LPIL Sbjct: 180 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPIL 239 Query: 84 NALLET------------------PQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAV 125 + + Q +LVL PTRELA QI E+ V+ V Sbjct: 240 SQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCV 299 Query: 126 IVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFE 185 + GG D Q L + H+++ATPGRL+D +E K L KYLV+DEADR+L+M FE Sbjct: 300 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDEADRMLDMGFE 358 Query: 186 TEVDKILK---VIPRD-RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241 ++ +I++ + P+ R T +FSAT K++Q L R L + AV T E + Q Sbjct: 359 PQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQK 418 Query: 242 YIFIPSKFKSK------------------------------------------------- 252 +++ K Sbjct: 419 VVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478 Query: 253 -RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRS 311 R +L++F++ IL+AT VA+RGLDI +V V+NFD+P+ ++Y+HR+GRT R G Sbjct: 479 DREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 538 Query: 312 GKAITFVTQYDVELFQRIEHLI 333 G A +F + ++ + + + L+ Sbjct: 539 GLATSFFNERNINITKDLLDLL 560 >gi|83700235 eukaryotic translation initiation factor 4A2 [Homo sapiens] Length = 407 Score = 175 bits (444), Expect = 6e-44 Identities = 116/381 (30%), Positives = 194/381 (50%), Gaps = 58/381 (15%) Query: 6 EHDSPTEASQP--IVEE---EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ 60 EH P E P ++E E F D+ + + L G+ KP+ IQ AI ++ Sbjct: 11 EHGGP-EGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIK 69 Query: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG 120 G D+I A++G+GKT FA+ IL L + ALVL PTRELA QI + ALG +G Sbjct: 70 GYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMG 129 Query: 121 VQSAVIVGGIDSMSQSLAL-AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179 +GG + ++ L A+ PHI++ TPGR+ D L N + + + +K V+DEAD + Sbjct: 130 ATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDML-NRRYLSPKWIKMFVLDEADEM 188 Query: 180 LNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQ 239 L+ F+ ++ +I + + + L SATM V ++ + +++P++ V + T+E ++ Sbjct: 189 LSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIK 248 Query: 240 QYY--------------------------IFIPSKFK----------------------- 250 Q+Y IF+ ++ K Sbjct: 249 QFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMD 308 Query: 251 -SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAG 309 +R + +F++ + +L+ TD+ +RG+D+ V +V+N+D+PT+ ++YIHR+GR R G Sbjct: 309 QKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 368 Query: 310 RSGKAITFVTQYDVELFQRIE 330 R G AI FVT+ D + + IE Sbjct: 369 RKGVAINFVTEEDKRILRDIE 389 >gi|41327779 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapiens] Length = 600 Score = 173 bits (439), Expect = 2e-43 Identities = 119/350 (34%), Positives = 177/350 (50%), Gaps = 69/350 (19%) Query: 38 ACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLF--- 94 A +LG+ T +Q IPL ++ +D+ A TGSGKT AF +PIL LL ++L Sbjct: 23 ALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQ 82 Query: 95 --ALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKP--HIIIATP 150 A+++TPTRELA QI E S ++ G + + + K+ +II+ATP Sbjct: 83 VGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATP 142 Query: 151 GRLIDHLEN-TKGFNL----RALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFS 205 GRL D +G +L R+L LV+DEADR+L+M FE ++ IL+ +P+ R+T LFS Sbjct: 143 GRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFS 202 Query: 206 ATMTKKVQKLQRAALKNPVKCAV-------SSKYQTVEKLQQYYIF-------------- 244 AT T++V+ L RA L+NPV+ +V SS +T +L+ YY+ Sbjct: 203 ATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFL 262 Query: 245 ------------------------------------IPSKFKSKRLGSLNKFKAKARSIL 268 I K K KR +F+ IL Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYKRNKIFMEFRKLQSGIL 322 Query: 269 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFV 318 + TDV +RG+DIP V+ V+ +D P+++ ++HR GRTAR G G A+ F+ Sbjct: 323 VCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFL 372 >gi|4503529 eukaryotic translation initiation factor 4A isoform 1 [Homo sapiens] Length = 406 Score = 172 bits (437), Expect = 4e-43 Identities = 110/372 (29%), Positives = 187/372 (50%), Gaps = 52/372 (13%) Query: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80 E +F D+ +++ L G+ KP+ IQ AI ++G D+I A++G+GKT FA+ Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88 Query: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL- 139 IL + + ALVL PTRELA QI + ALG +G +GG + ++ L Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148 Query: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199 + PHII+ TPGR+ D L N + + + +K V+DEAD +L+ F+ ++ I + + + Sbjct: 149 MEAPHIIVGTPGRVFDML-NRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT 207 Query: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYY----------------- 242 + L SATM V ++ + +++P++ V + T+E ++Q+Y Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLY 267 Query: 243 ---------IFIPSKFK------------------------SKRLGSLNKFKAKARSILL 269 IFI ++ K +R + +F++ + +L+ Sbjct: 268 ETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLI 327 Query: 270 ATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 329 TD+ +RG+D+ V +V+N+D+PT+ ++YIHR+GR R GR G AI VT+ D + I Sbjct: 328 TTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI 387 Query: 330 EHLIGKKLPGFP 341 E + P Sbjct: 388 ETFYNTSIEEMP 399 >gi|4758112 HLA-B associated transcript 1 [Homo sapiens] Length = 428 Score = 172 bits (436), Expect = 5e-43 Identities = 110/374 (29%), Positives = 186/374 (49%), Gaps = 55/374 (14%) Query: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85 F+D + L A G+ P+++Q E IP A+ G D++ A++G GKT F L L Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106 Query: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143 L ++ LV+ TRELAFQIS+++E + V+ AV GG+ L K P Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166 Query: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTF 202 HI++ TPGR++ L K NL+ +K+ ++DE D++L +D +V +I ++ P +++ Sbjct: 167 HIVVGTPGRIL-ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225 Query: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKSK--------- 252 +FSAT++K+++ + R +++P++ V + + T+ LQQYY+ + K++ Sbjct: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285 Query: 253 ----------------------------------------RLGSLNKFKAKARSILLATD 272 RL +FK R IL+AT+ Sbjct: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345 Query: 273 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEH 331 + RG+DI V++ N+D+P S Y+HRV R R G G AITFV+ + D ++ ++ Sbjct: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405 Query: 332 LIGKKLPGFPTQDD 345 + P + D Sbjct: 406 RFEVNISELPDEID 419 >gi|18375623 HLA-B associated transcript 1 [Homo sapiens] Length = 428 Score = 172 bits (436), Expect = 5e-43 Identities = 110/374 (29%), Positives = 186/374 (49%), Gaps = 55/374 (14%) Query: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85 F+D + L A G+ P+++Q E IP A+ G D++ A++G GKT F L L Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106 Query: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143 L ++ LV+ TRELAFQIS+++E + V+ AV GG+ L K P Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166 Query: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTF 202 HI++ TPGR++ L K NL+ +K+ ++DE D++L +D +V +I ++ P +++ Sbjct: 167 HIVVGTPGRIL-ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225 Query: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKSK--------- 252 +FSAT++K+++ + R +++P++ V + + T+ LQQYY+ + K++ Sbjct: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285 Query: 253 ----------------------------------------RLGSLNKFKAKARSILLATD 272 RL +FK R IL+AT+ Sbjct: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345 Query: 273 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEH 331 + RG+DI V++ N+D+P S Y+HRV R R G G AITFV+ + D ++ ++ Sbjct: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405 Query: 332 LIGKKLPGFPTQDD 345 + P + D Sbjct: 406 RFEVNISELPDEID 419 >gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [Homo sapiens] Length = 660 Score = 172 bits (436), Expect = 5e-43 Identities = 118/382 (30%), Positives = 187/382 (48%), Gaps = 73/382 (19%) Query: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83 + F D+ + +++ + +T+PT +Q AIP+ RD++ A+TGSGKT AF LPIL Sbjct: 178 ENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPIL 237 Query: 84 NALL------------------ETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAV 125 + + Q +LVL PTRELA QI E+ V+ V Sbjct: 238 SQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCV 297 Query: 126 IVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFE 185 + GG D Q L + H+++ATPGRL+D +E K L KYLV+DEADR+L+M FE Sbjct: 298 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDEADRMLDMGFE 356 Query: 186 TEVDKILK---VIPRD-RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241 ++ +I++ + P+ R T +FSAT K++Q L R L + AV T E + Q Sbjct: 357 PQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQK 416 Query: 242 YIFIP--------------------------------------------------SKFKS 251 +++ + + Sbjct: 417 VVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 476 Query: 252 KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRS 311 R +L++F++ IL+AT VA+RGLDI +V V+NFD+P+ ++Y+HR+GRT R G Sbjct: 477 DREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNL 536 Query: 312 GKAITFVTQYDVELFQRIEHLI 333 G A +F + ++ + + + L+ Sbjct: 537 GLATSFFNEKNMNITKDLLDLL 558 >gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [Homo sapiens] Length = 660 Score = 172 bits (436), Expect = 5e-43 Identities = 118/382 (30%), Positives = 187/382 (48%), Gaps = 73/382 (19%) Query: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83 + F D+ + +++ + +T+PT +Q AIP+ RD++ A+TGSGKT AF LPIL Sbjct: 178 ENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPIL 237 Query: 84 NALL------------------ETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAV 125 + + Q +LVL PTRELA QI E+ V+ V Sbjct: 238 SQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCV 297 Query: 126 IVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFE 185 + GG D Q L + H+++ATPGRL+D +E K L KYLV+DEADR+L+M FE Sbjct: 298 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDEADRMLDMGFE 356 Query: 186 TEVDKILK---VIPRD-RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241 ++ +I++ + P+ R T +FSAT K++Q L R L + AV T E + Q Sbjct: 357 PQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQK 416 Query: 242 YIFIP--------------------------------------------------SKFKS 251 +++ + + Sbjct: 417 VVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 476 Query: 252 KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRS 311 R +L++F++ IL+AT VA+RGLDI +V V+NFD+P+ ++Y+HR+GRT R G Sbjct: 477 DREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNL 536 Query: 312 GKAITFVTQYDVELFQRIEHLI 333 G A +F + ++ + + + L+ Sbjct: 537 GLATSFFNEKNMNITKDLLDLL 558 >gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo sapiens] Length = 427 Score = 169 bits (428), Expect = 4e-42 Identities = 108/374 (28%), Positives = 188/374 (50%), Gaps = 55/374 (14%) Query: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85 F+D + L A G+ P+++Q E IP A+ G D++ A++G GKT F L L Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105 Query: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143 + ++ LV+ TRELAFQIS+++E + V+ +V GG+ L K P Sbjct: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP 165 Query: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTF 202 H+++ TPGR++ + N + F+L+ +K+ V+DE D++L +D +V +I ++ P +++ Sbjct: 166 HVVVGTPGRILALVRN-RSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCM 224 Query: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKSK--------- 252 +FSAT++K ++ + R +++P++ V + + T+ LQQYY+ + K++ Sbjct: 225 MFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVL 284 Query: 253 ----------------------------------------RLGSLNKFKAKARSILLATD 272 RL +FK R IL+AT+ Sbjct: 285 EFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATN 344 Query: 273 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEH 331 + RG+DI V++V N+D+P S Y+HRV R R G G AITFV+ + D ++ ++ Sbjct: 345 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 404 Query: 332 LIGKKLPGFPTQDD 345 + P + D Sbjct: 405 RFEVNVAELPEEID 418 >gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapiens] Length = 631 Score = 164 bits (414), Expect = 2e-40 Identities = 130/396 (32%), Positives = 202/396 (51%), Gaps = 60/396 (15%) Query: 35 LCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETP---- 90 L ++ ++G KPT IQ +A P+ LQG D+I +A+TG+GKT ++ +P L P Sbjct: 233 LLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISRE 292 Query: 91 QRLFA--LVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIA 148 QR LVLTPTRELA + + S G++S I GG + Q ++K IIIA Sbjct: 293 QRNGPGMLVLTPTRELALHVEAECSKY-SYKGLKSICIYGGRNRNGQIEDISKGVDIIIA 351 Query: 149 TPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATM 208 TPGRL D L+ NLR++ YLV+DEAD++L+M+FE ++ KIL + DR+T + SAT Sbjct: 352 TPGRLND-LQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATW 410 Query: 209 TKKVQKLQRAALKNPV--------KCAVSSKYQ----TVEK----LQQYYI--------- 243 V++L + LK+P+ AV++ Q T EK L Q ++ Sbjct: 411 PDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDKV 470 Query: 244 --FIPSKFKSKRLGS------------------------LNKFKAKARSILLATDVASRG 277 F+ K + L S + FK+ IL+ TD+ SRG Sbjct: 471 IMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRG 530 Query: 278 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 337 LD+ V V N+D P + Y+HRVG R G++G ++T +TQ D ++ + ++ + Sbjct: 531 LDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRAN 590 Query: 338 PGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKK 373 P +D VM ++ + +R R+ G+++K Sbjct: 591 QSVP-EDLVVMAEQYKLNQQKRHRETRSRKPGQRRK 625 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.134 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,873,006 Number of Sequences: 37866 Number of extensions: 569464 Number of successful extensions: 1804 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 1563 Number of HSP's gapped (non-prelim): 140 length of query: 406 length of database: 18,247,518 effective HSP length: 105 effective length of query: 301 effective length of database: 14,271,588 effective search space: 4295747988 effective search space used: 4295747988 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.